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The map label for this gene is 116625674

Identifier: 116625674

GI number: 116625674

Start: 8310652

End: 8312166

Strand: Direct

Name: 116625674

Synonym: Acid_6623

Alternate gene names: NA

Gene position: 8310652-8312166 (Clockwise)

Preceding gene: 116625673

Following gene: 116625675

Centisome position: 83.39

GC content: 62.38

Gene sequence:

>1515_bases
ATGGGCGGAGCTCCACAGCGAAAAAAGGTAGTTTTTTTCTTCCCGGCGTTCTCCAGCCAGGAAGCGACAGCGCCTTTGGG
AATACTGGCGGTTTCCACACCTTTGCTGAATGCCGGGTACCAGGTGCAGCTGATCGATTCCACAATCACGCCAAATTTCC
AACGGCGGGTGATCGAGGAACTGAAAGACGCCATCTGCCTGGCGGTATCGCTGGTCACCGGTCCGATGATCCGCGAGACC
GTGCAGATCGCGCGCGAGGTGAAGCGGCTCTATCCGAAGATGCCGATCGTGCTGGGCGGGTGGCATCCTTCGCTGCTGCC
GGATCAGACGCTGGCGGCCGAGTACATTGACGCGGTGGTGGTGGGTCAGGGCGAGGAAGCGCTGCTTGCGGTGGTGCAGC
GGCTGGAGGCCGGCGAATCGCTGGAGGGAATCCCAGGGGTCGGGTACAAGGAAGACGGGCGGATCCGCTTCAACGTAACG
AGAGCGTTGCGGCCGCTCAAAGAGATGCCGCCGAAGGCCTACCATCTGGCGGACTTCGACGCGTACCAGCGGGTCTGCGG
GCGGCGATGGGCGATGTACACCTCGAGCCTGGCCTGCCCATACAACTGCGGGTATTGCACCAACGACGGCGTGTACGGGC
GCAAATGGAATGCGCTGGATCCGGCGCAAGTGGTGGAAGAGACCACCGACCTGGTGAGCCGATACAACCTGGAACTGTTG
TGGATCGTGGATGATAATTTCCTGGTGGACCGGGAGCGCGCGGTGGGGATTGCGGAAGGCCTGGTGCGGCGCGGCGTGAA
GTTCGATTGGAGCATACAGGCGTCCACGAACCTGGTGATCCGGCTGACGGTAGAGGAGTTGAAGCTGCTGCGGCGGGCGG
GGCTCACGCAGATGTCGCAGGGCGCCGACACGGGCTCCGCGAAGATGATGCACCTGATGGGCAAGGATTTCCAGGACCTG
GACGCCATCTATGGGGCCGCCGACAAACTGACGCAGGCGGGCATCCGGCCGAGCTTCAACCTGATTTTCGGCTATCCCGG
AGAAGGGGAAAAAGAGCGGCGCGAATCGGTGGCGCTGATGATGAACATCTGCCGCCGCTATCCGGGCGCGGAATTCTGGA
CCAATATTTTCACGCCTTATCCGGGATCGCCAATTATGAAACGGGCGTTCGAACTCGGCATCGAAGTTCCGAAGACGCTG
GAGGGATGGGCGGACTTCTTCCCGCGCTATACGGTGCTGCCGTGGCTGAAGGGCCGCGAGCACGAGCGGCTGCAGAATAT
GCGCGAGTACATGCGGGTGGCCTTCCACCGCGTGCCGATCGGAAAATATCGCACGCCGGCGCTGAGCCGGCTGTTGTTCG
AGTTGATCAGCGTGCCGGCGCGCTGGCGGCTGGACCACCACGTGTACTCGTTCCCGGTGGAACTGTGGGCGCGCAAGACG
GCGCAAAAAGTGCTGACACCGCCCAAGCCCAAGGTGGACGCGCAGCAACTTTCGGCCGAGCCGGTTACCTGCTAG

Upstream 100 bases:

>100_bases
ATCGGTATTTGTGACCCTGAAGCCGGACGCGAAACACTTTTGACATACTTTTTACATTCCCGCGACACTCGGGGGCGGCG
CCCGGGATGACGCTAATACC

Downstream 100 bases:

>100_bases
GGGAAGCCAATGGCGGACATACTGCTGACCCATTCGAATCACCTCTACAGCGACCGCAAGCAGTTGCGGAAGATGCAGCC
GTATCCGCCGCTGCAGACGC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MGGAPQRKKVVFFFPAFSSQEATAPLGILAVSTPLLNAGYQVQLIDSTITPNFQRRVIEELKDAICLAVSLVTGPMIRET
VQIAREVKRLYPKMPIVLGGWHPSLLPDQTLAAEYIDAVVVGQGEEALLAVVQRLEAGESLEGIPGVGYKEDGRIRFNVT
RALRPLKEMPPKAYHLADFDAYQRVCGRRWAMYTSSLACPYNCGYCTNDGVYGRKWNALDPAQVVEETTDLVSRYNLELL
WIVDDNFLVDRERAVGIAEGLVRRGVKFDWSIQASTNLVIRLTVEELKLLRRAGLTQMSQGADTGSAKMMHLMGKDFQDL
DAIYGAADKLTQAGIRPSFNLIFGYPGEGEKERRESVALMMNICRRYPGAEFWTNIFTPYPGSPIMKRAFELGIEVPKTL
EGWADFFPRYTVLPWLKGREHERLQNMREYMRVAFHRVPIGKYRTPALSRLLFELISVPARWRLDHHVYSFPVELWARKT
AQKVLTPPKPKVDAQQLSAEPVTC

Sequences:

>Translated_504_residues
MGGAPQRKKVVFFFPAFSSQEATAPLGILAVSTPLLNAGYQVQLIDSTITPNFQRRVIEELKDAICLAVSLVTGPMIRET
VQIAREVKRLYPKMPIVLGGWHPSLLPDQTLAAEYIDAVVVGQGEEALLAVVQRLEAGESLEGIPGVGYKEDGRIRFNVT
RALRPLKEMPPKAYHLADFDAYQRVCGRRWAMYTSSLACPYNCGYCTNDGVYGRKWNALDPAQVVEETTDLVSRYNLELL
WIVDDNFLVDRERAVGIAEGLVRRGVKFDWSIQASTNLVIRLTVEELKLLRRAGLTQMSQGADTGSAKMMHLMGKDFQDL
DAIYGAADKLTQAGIRPSFNLIFGYPGEGEKERRESVALMMNICRRYPGAEFWTNIFTPYPGSPIMKRAFELGIEVPKTL
EGWADFFPRYTVLPWLKGREHERLQNMREYMRVAFHRVPIGKYRTPALSRLLFELISVPARWRLDHHVYSFPVELWARKT
AQKVLTPPKPKVDAQQLSAEPVTC
>Mature_503_residues
GGAPQRKKVVFFFPAFSSQEATAPLGILAVSTPLLNAGYQVQLIDSTITPNFQRRVIEELKDAICLAVSLVTGPMIRETV
QIAREVKRLYPKMPIVLGGWHPSLLPDQTLAAEYIDAVVVGQGEEALLAVVQRLEAGESLEGIPGVGYKEDGRIRFNVTR
ALRPLKEMPPKAYHLADFDAYQRVCGRRWAMYTSSLACPYNCGYCTNDGVYGRKWNALDPAQVVEETTDLVSRYNLELLW
IVDDNFLVDRERAVGIAEGLVRRGVKFDWSIQASTNLVIRLTVEELKLLRRAGLTQMSQGADTGSAKMMHLMGKDFQDLD
AIYGAADKLTQAGIRPSFNLIFGYPGEGEKERRESVALMMNICRRYPGAEFWTNIFTPYPGSPIMKRAFELGIEVPKTLE
GWADFFPRYTVLPWLKGREHERLQNMREYMRVAFHRVPIGKYRTPALSRLLFELISVPARWRLDHHVYSFPVELWARKTA
QKVLTPPKPKVDAQQLSAEPVTC

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 56915; Mature: 56783

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGAPQRKKVVFFFPAFSSQEATAPLGILAVSTPLLNAGYQVQLIDSTITPNFQRRVIEE
CCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCHHHCCCCEEEEECCCCCCHHHHHHHHH
LKDAICLAVSLVTGPMIRETVQIAREVKRLYPKMPIVLGGWHPSLLPDQTLAAEYIDAVV
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCEEE
VGQGEEALLAVVQRLEAGESLEGIPGVGYKEDGRIRFNVTRALRPLKEMPPKAYHLADFD
ECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEECCCHH
AYQRVCGRRWAMYTSSLACPYNCGYCTNDGVYGRKWNALDPAQVVEETTDLVSRYNLELL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
WIVDDNFLVDRERAVGIAEGLVRRGVKFDWSIQASTNLVIRLTVEELKLLRRAGLTQMSQ
EEECCCEEECHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHHHHHHCCCHHHHC
GADTGSAKMMHLMGKDFQDLDAIYGAADKLTQAGIRPSFNLIFGYPGEGEKERRESVALM
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHH
MNICRRYPGAEFWTNIFTPYPGSPIMKRAFELGIEVPKTLEGWADFFPRYTVLPWLKGRE
HHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEECCCCCCCH
HERLQNMREYMRVAFHRVPIGKYRTPALSRLLFELISVPARWRLDHHVYSFPVELWARKT
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHH
AQKVLTPPKPKVDAQQLSAEPVTC
HHHHCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
GGAPQRKKVVFFFPAFSSQEATAPLGILAVSTPLLNAGYQVQLIDSTITPNFQRRVIEE
CCCCCCCEEEEEEECCCCCCCCCCEEEEEECCHHHCCCCEEEEECCCCCCHHHHHHHHH
LKDAICLAVSLVTGPMIRETVQIAREVKRLYPKMPIVLGGWHPSLLPDQTLAAEYIDAVV
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCEEE
VGQGEEALLAVVQRLEAGESLEGIPGVGYKEDGRIRFNVTRALRPLKEMPPKAYHLADFD
ECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEECCCHH
AYQRVCGRRWAMYTSSLACPYNCGYCTNDGVYGRKWNALDPAQVVEETTDLVSRYNLELL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
WIVDDNFLVDRERAVGIAEGLVRRGVKFDWSIQASTNLVIRLTVEELKLLRRAGLTQMSQ
EEECCCEEECHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHHHHHHCCCHHHHC
GADTGSAKMMHLMGKDFQDLDAIYGAADKLTQAGIRPSFNLIFGYPGEGEKERRESVALM
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHH
MNICRRYPGAEFWTNIFTPYPGSPIMKRAFELGIEVPKTLEGWADFFPRYTVLPWLKGRE
HHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEECCCCCCCH
HERLQNMREYMRVAFHRVPIGKYRTPALSRLLFELISVPARWRLDHHVYSFPVELWARKT
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHH
AQKVLTPPKPKVDAQQLSAEPVTC
HHHHCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]