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The map label for this gene is 116625675

Identifier: 116625675

GI number: 116625675

Start: 8312176

End: 8313579

Strand: Direct

Name: 116625675

Synonym: Acid_6624

Alternate gene names: NA

Gene position: 8312176-8313579 (Clockwise)

Preceding gene: 116625674

Following gene: 116625676

Centisome position: 83.41

GC content: 63.96

Gene sequence:

>1404_bases
ATGGCGGACATACTGCTGACCCATTCGAATCACCTCTACAGCGACCGCAAGCAGTTGCGGAAGATGCAGCCGTATCCGCC
GCTGCAGACGCTGCTGGCCGCGGCCTGCCTGCGGCGGGCAGGCTACGAGGTGGCACTATTTGACGCGGCGCTGGAAGATC
CGGAAACCGGCTTCGAAAGAGCGCTCGCGCGCCACAACCCGCGACTAGTGGCGGTGTGCGAAGACAATTTCAATTTCCTG
ACGAAGATGTGCCTGCTGCGCAATCGCGAACTGGCGTGCTGGATGGCGCGGACGGCGTGCCGAACGGGAGTGCCGGCGGT
GGTCAACGGCTCCGACGCCGCCGATCGCGCAGCCGAATACCTGGCGGCGGGCTTCCGCTATGTGCTCGAAGGCGAGGTGG
AGGAGAGCATCGTGGAGGTCGCGCGCCTGATGCTGGATGGTGAGGGCGCAATGCCGCTGCGCGGAATCGCGTTTTCCGAT
CCTCAATCGGGGCAGGTCCGGCAAACGCCACGACGGGCTCCGATCACCGGCCTGGATGCGCTGCCGATGCCCGCATGGGA
CCTGATCGACGCCGAGCCCTACCGGCGGGCGTGGACCGAAGCGCATGGCTATTTTTCGATGAACATGGTTTCCAGCCGCG
GCTGCCCGTACCGGTGCAACTGGTGCGCCAAGCCGATCTGGGGCGACAGCTACCATTGCAGGTCGGCACACCTGGTGGCG
GAGGAGATGCTGGCAATCAAGTCGCAGTTCCGGCCCGATCATCTCTGGTTCGCCGACGACATCTTCGCGCTTTCGCAGCA
GTGGACGCTGGAATTCGCCGACGCTGTGGAGGCGCTTGGGGCGCAGATTCCCTTCAAGATGCAATCGCGCTGCGACCTGA
TGACGCGTCCAACGGTGGGCGCGCTGGCGCGCGCGGGCTGCACGGAGGTCTGGATGGGAGTGGAATCGGGCGCACAGGAT
GTGCTGGACGCGATGGACAAGGGCACGCGGCTCTGGCAGGTTTACGAAGCGCGCGAAAGTCTCTGCCGGCACGGAATCCG
GGCCTGCTACTTTCTACAGTTCGGGTATCCGGGCGAGACCTGGACGGAGATCGAGAAGACGCTCGCGTTGGTGCGGGAGA
CACGTCCCGACGATATTGGCGTGTCGGTTTCCTACCCGCTGCCGGGTACCGCGTTTCATAAGATGGTGTCGAGCCAGTTG
GGTCCCAAGGAGAATTGGGCCGACAGCGACGATCTGGATATGATGTTCCAGGGCGCCTTTACCAGCGGCTTTTATCGCGC
CCTTGCGGATGCGCTGCATGTAGAGGTGCGGGAGGGCCGCGAGGCCGCCGAAGGAGCCTGGTCCACCGTGTTCGCACTTA
AGGAGACTTGCGCGCGCAAGCTGCCGATATGGATCTCCTGCTAA

Upstream 100 bases:

>100_bases
GTGGGCGCGCAAGACGGCGCAAAAAGTGCTGACACCGCCCAAGCCCAAGGTGGACGCGCAGCAACTTTCGGCCGAGCCGG
TTACCTGCTAGGGGAAGCCA

Downstream 100 bases:

>100_bases
CACACGGATATTTTCTGCACGAGGACGCGAAGGAGCTTCAGATCATGAAGCCCTACGCGCCGCTCGGGCTGCTCTACCTC
TCGTCGTATCTGCGCGGCAA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MADILLTHSNHLYSDRKQLRKMQPYPPLQTLLAAACLRRAGYEVALFDAALEDPETGFERALARHNPRLVAVCEDNFNFL
TKMCLLRNRELACWMARTACRTGVPAVVNGSDAADRAAEYLAAGFRYVLEGEVEESIVEVARLMLDGEGAMPLRGIAFSD
PQSGQVRQTPRRAPITGLDALPMPAWDLIDAEPYRRAWTEAHGYFSMNMVSSRGCPYRCNWCAKPIWGDSYHCRSAHLVA
EEMLAIKSQFRPDHLWFADDIFALSQQWTLEFADAVEALGAQIPFKMQSRCDLMTRPTVGALARAGCTEVWMGVESGAQD
VLDAMDKGTRLWQVYEARESLCRHGIRACYFLQFGYPGETWTEIEKTLALVRETRPDDIGVSVSYPLPGTAFHKMVSSQL
GPKENWADSDDLDMMFQGAFTSGFYRALADALHVEVREGREAAEGAWSTVFALKETCARKLPIWISC

Sequences:

>Translated_467_residues
MADILLTHSNHLYSDRKQLRKMQPYPPLQTLLAAACLRRAGYEVALFDAALEDPETGFERALARHNPRLVAVCEDNFNFL
TKMCLLRNRELACWMARTACRTGVPAVVNGSDAADRAAEYLAAGFRYVLEGEVEESIVEVARLMLDGEGAMPLRGIAFSD
PQSGQVRQTPRRAPITGLDALPMPAWDLIDAEPYRRAWTEAHGYFSMNMVSSRGCPYRCNWCAKPIWGDSYHCRSAHLVA
EEMLAIKSQFRPDHLWFADDIFALSQQWTLEFADAVEALGAQIPFKMQSRCDLMTRPTVGALARAGCTEVWMGVESGAQD
VLDAMDKGTRLWQVYEARESLCRHGIRACYFLQFGYPGETWTEIEKTLALVRETRPDDIGVSVSYPLPGTAFHKMVSSQL
GPKENWADSDDLDMMFQGAFTSGFYRALADALHVEVREGREAAEGAWSTVFALKETCARKLPIWISC
>Mature_466_residues
ADILLTHSNHLYSDRKQLRKMQPYPPLQTLLAAACLRRAGYEVALFDAALEDPETGFERALARHNPRLVAVCEDNFNFLT
KMCLLRNRELACWMARTACRTGVPAVVNGSDAADRAAEYLAAGFRYVLEGEVEESIVEVARLMLDGEGAMPLRGIAFSDP
QSGQVRQTPRRAPITGLDALPMPAWDLIDAEPYRRAWTEAHGYFSMNMVSSRGCPYRCNWCAKPIWGDSYHCRSAHLVAE
EMLAIKSQFRPDHLWFADDIFALSQQWTLEFADAVEALGAQIPFKMQSRCDLMTRPTVGALARAGCTEVWMGVESGAQDV
LDAMDKGTRLWQVYEARESLCRHGIRACYFLQFGYPGETWTEIEKTLALVRETRPDDIGVSVSYPLPGTAFHKMVSSQLG
PKENWADSDDLDMMFQGAFTSGFYRALADALHVEVREGREAAEGAWSTVFALKETCARKLPIWISC

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 52350; Mature: 52219

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADILLTHSNHLYSDRKQLRKMQPYPPLQTLLAAACLRRAGYEVALFDAALEDPETGFER
CCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCHHHHH
ALARHNPRLVAVCEDNFNFLTKMCLLRNRELACWMARTACRTGVPAVVNGSDAADRAAEY
HHHHCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHH
LAAGFRYVLEGEVEESIVEVARLMLDGEGAMPLRGIAFSDPQSGQVRQTPRRAPITGLDA
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
LPMPAWDLIDAEPYRRAWTEAHGYFSMNMVSSRGCPYRCNWCAKPIWGDSYHCRSAHLVA
CCCCCHHCCCCCHHHHHHHHHCCEEEEEEHHCCCCCEECCCCCCCCCCCCCCCCHHHHHH
EEMLAIKSQFRPDHLWFADDIFALSQQWTLEFADAVEALGAQIPFKMQSRCDLMTRPTVG
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHH
ALARAGCTEVWMGVESGAQDVLDAMDKGTRLWQVYEARESLCRHGIRACYFLQFGYPGET
HHHHCCHHHHHHCHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCH
WTEIEKTLALVRETRPDDIGVSVSYPLPGTAFHKMVSSQLGPKENWADSDDLDMMFQGAF
HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
TSGFYRALADALHVEVREGREAAEGAWSTVFALKETCARKLPIWISC
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure 
ADILLTHSNHLYSDRKQLRKMQPYPPLQTLLAAACLRRAGYEVALFDAALEDPETGFER
CCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCHHHHH
ALARHNPRLVAVCEDNFNFLTKMCLLRNRELACWMARTACRTGVPAVVNGSDAADRAAEY
HHHHCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHH
LAAGFRYVLEGEVEESIVEVARLMLDGEGAMPLRGIAFSDPQSGQVRQTPRRAPITGLDA
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
LPMPAWDLIDAEPYRRAWTEAHGYFSMNMVSSRGCPYRCNWCAKPIWGDSYHCRSAHLVA
CCCCCHHCCCCCHHHHHHHHHCCEEEEEEHHCCCCCEECCCCCCCCCCCCCCCCHHHHHH
EEMLAIKSQFRPDHLWFADDIFALSQQWTLEFADAVEALGAQIPFKMQSRCDLMTRPTVG
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHH
ALARAGCTEVWMGVESGAQDVLDAMDKGTRLWQVYEARESLCRHGIRACYFLQFGYPGET
HHHHCCHHHHHHCHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCH
WTEIEKTLALVRETRPDDIGVSVSYPLPGTAFHKMVSSQLGPKENWADSDDLDMMFQGAF
HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
TSGFYRALADALHVEVREGREAAEGAWSTVFALKETCARKLPIWISC
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]