| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625663
Identifier: 116625663
GI number: 116625663
Start: 8297912
End: 8298424
Strand: Direct
Name: 116625663
Synonym: Acid_6612
Alternate gene names: NA
Gene position: 8297912-8298424 (Clockwise)
Preceding gene: 116625657
Following gene: 116625664
Centisome position: 83.27
GC content: 66.28
Gene sequence:
>513_bases ATGGGTAAGAGCAAGCTCGACCGCCGCCGGTTCCTGGGAAGCGCGCTGGCCGTTTCCGCAACCGCAGGCTGCTCGAAGAA AGCAGCGCCTCTTCTTTCCGAAGGCGAGATGAGGACCCTCGCAGCCATCTGCGATCAGATGATTCCGCCGGACCAGGATC CCGGCGGAGCCTGGGCGGGCGTGCCCAATTACATCAGCCGCCAACTGCGCGGCCCGTTCCGCGAGTATTTCGAGGCTTAC CGCGCAGGAATCGCGGAGGCCGACCGGCGCGCCGGCGGCAGCTTCGCAGGGCTTACGCGCGAACAACAGCTTGACGTGCT GAACGCGATGGACCGCGATCGGGAGACGAGGAACTTTGTCTCACTGGTGGCCGCCCATTCCGCGCAGGGCTATTACGGCA ATCCGCGCCACGGCGGCAATCGCGATCATTGCAGCTGGCGAATGCTGGGCGTGCCGGCGTCCCCCGTGCGCGGGCGCGAC CGGTACGACTTCACCAAAGGCGGGCGATCGTGA
Upstream 100 bases:
>100_bases GGTCGGTAATTCGGGATTTATTCTCGCGGTCGCCTTGCTAGCGCGGTGGGCTGAACCGGCGTGTGCCTTGTGATACCGTT GCGTTGAAGTTTCCCGGCTA
Downstream 100 bases:
>100_bases AGAAGGCGGATGCAATCGTGATCGGCGCGGGCGCGGGCGGAGGCGTGGTCGCCAAGGAACTGGCGGTCGCCGGATTGCAG GTCGTGCTGCTGGAGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MGKSKLDRRRFLGSALAVSATAGCSKKAAPLLSEGEMRTLAAICDQMIPPDQDPGGAWAGVPNYISRQLRGPFREYFEAY RAGIAEADRRAGGSFAGLTREQQLDVLNAMDRDRETRNFVSLVAAHSAQGYYGNPRHGGNRDHCSWRMLGVPASPVRGRD RYDFTKGGRS
Sequences:
>Translated_170_residues MGKSKLDRRRFLGSALAVSATAGCSKKAAPLLSEGEMRTLAAICDQMIPPDQDPGGAWAGVPNYISRQLRGPFREYFEAY RAGIAEADRRAGGSFAGLTREQQLDVLNAMDRDRETRNFVSLVAAHSAQGYYGNPRHGGNRDHCSWRMLGVPASPVRGRD RYDFTKGGRS >Mature_169_residues GKSKLDRRRFLGSALAVSATAGCSKKAAPLLSEGEMRTLAAICDQMIPPDQDPGGAWAGVPNYISRQLRGPFREYFEAYR AGIAEADRRAGGSFAGLTREQQLDVLNAMDRDRETRNFVSLVAAHSAQGYYGNPRHGGNRDHCSWRMLGVPASPVRGRDR YDFTKGGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18622; Mature: 18491
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSKLDRRRFLGSALAVSATAGCSKKAAPLLSEGEMRTLAAICDQMIPPDQDPGGAWAG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC VPNYISRQLRGPFREYFEAYRAGIAEADRRAGGSFAGLTREQQLDVLNAMDRDRETRNFV CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH SLVAAHSAQGYYGNPRHGGNRDHCSWRMLGVPASPVRGRDRYDFTKGGRS HHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GKSKLDRRRFLGSALAVSATAGCSKKAAPLLSEGEMRTLAAICDQMIPPDQDPGGAWAG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC VPNYISRQLRGPFREYFEAYRAGIAEADRRAGGSFAGLTREQQLDVLNAMDRDRETRNFV CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH SLVAAHSAQGYYGNPRHGGNRDHCSWRMLGVPASPVRGRDRYDFTKGGRS HHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA