| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is nahA [H]
Identifier: 116625620
GI number: 116625620
Start: 8231414
End: 8233405
Strand: Direct
Name: nahA [H]
Synonym: Acid_6569
Alternate gene names: 116625620
Gene position: 8231414-8233405 (Clockwise)
Preceding gene: 116625618
Following gene: 116625621
Centisome position: 82.6
GC content: 65.56
Gene sequence:
>1992_bases ATGGAGGTGATGCTTCGATATGCGCTCTTTTGCGCCCTTCTTTCCAGTGCTCATGCGGCGGCGCCCGCGTTGATGCCGCT GCCCGCCACGATGCGGCCGGCCGCTGGCAAACTGACGATCGATTCGAGTTTCAAGGCGACGCTTTCCGGCGCGGCTGATG CGCACCTGGAGGCGGCGATCGCGCGCTTCACGGCGCAACTCTCGCGGCAGACCGGGATCCCTATGTTCGCGAACAAGGGC GCAGCAGCCAGGCTGCGCGTCGAATGCGCGTCCGCCGGCGGGGAGGTTCCCAAGCTCGGCGACAACGAGGCGTACACGTT GGACGTCACGGCGGATGGAGCCACACTCAAAGCGCCCGAGCGCGCCGGCGTGCTGCACGGCCTGGCAACCTTCGCACAAC TGGTAATGCTGGGCGATCAGGGTTACGAAGTACCGGCCGTCCACATTGAAGATCGACCGCGGTTTCCGTGGCGCGGACTG ATGCTGGATTCGGCGCGGCACTTCATGCCGCTTGCGGTGGTGAAACGCAACCTGGACGCGATGGCGGCCGTGAAGCTCAA CGTCTTCCACTGGCACCTTTCCGAGGACCAGGGCTTCCGCGTGGAGAGCAAGCGCTATCCCAAGCTGCAGGAGAAGGGGT CCGACGGCCTCTTCTACACGCAGTCCGAGATCCGCGACATTGTGAGCTACGCGAGGGATCGCGGCATCCGCGTGGTGCCG GAGTTCGACATCCCGGGACACACCACGGCATGGATGGTGGGCTACCCCGAATTGGGTACCGTTCCCGGGCCGTATGAAAT CGGGCGCAAGTGGGGCGTGTACGAAAACGCGCTGGATCCGAGCCGCGAAGAGACCTACACTTTCCTGGATAACTTCTTCG AAGAAATCACGCCGCTCTTCGCCGACCTTTACTTCCACATCGGCGGCGACGAAGTAGTGGCCAGGCAGTGGAACGCGTCG GCGCGCGTTCAGGCGTGGGCCAAGGAACACAACCTGAAAGACGCGCACGCGATCCAGGCGTACTTCAACACGCGCGTGCA GAAACTGCTGCAGAAGCGCGGCAAGGTGCTGATCGGCTGGGACGAGGTACTGCATCCCGACCTGCCGAAGGACATTGTGG TGCAGTCCTGGCGCGGGCAGAAATCGCTGGCCGAAGCGGCGACTAAAGGCTATCGCGGGATTCTCTCGTGGGGCTATTAT CTGGATCACCTGAGCCCGGCGAAGTTCCACTATGGCGTGGACCCGATGTCGAGCGACGCCGACAAACTAGCGCCGGAGCA GGCCTCGCGCATCCTCGGAGGCGAAGCATGCATGTGGGCCGAATACACGACGTCGGAAACCGTGGATTCGCGGATCTGGC CGCGCGCGGCGGTGATCGCGGAGCGCTTGTGGTCGCCCGCCGCGACTGTGGATGTGGAATCGATGTACACGCGGATGGAA GCCGTCAGCCGCGAGCTGGAATGGACGGGCGTGCAGCATCGCGCCAATTACGCGCCCATGCTGGACCGCATGACGGGCGG CGCTCCGGCGGAGCCCTTGCGCATACTGGCAGACGCTGTGGAGGGCCTGGGCCTGAGTCCCCGAGCGCGAGTCGCGAAAT ACACCAGCCTGACGCCGATGAACCGTTTGGCCGATGCCGCGCGCCCCGAGAGCGAGAGCGTGCACGCGCTCGAACTGGCG GCCGCCAAGGTGGCTGCCGATCCCAACGGCAGCACGGCGGAGGCCGCGGCGCTGCGCACTGCGTTCACGCGGTGGGCAGC CAACGACGCGCGCTTCCAGGAACTCGCGGCCGGCAATCCGCTGCTCGCGGAATTGAAGCCGCTATCAAAGGATCTGGCCG CGCTCGGCAACGCCGGTCTGGCGCTGCTGGATGGCAGGCCGGCCCCCGCCGGATTCGCCGCCGAGTTGACGCGAATGGAG CGGCCCCTTGCCGAGGTCTCGCTCGCGGCGACGCGCCCGGTGAAGATCCTGCTGAACGCCGGCAGGAAGTAG
Upstream 100 bases:
>100_bases CCGGTAAGGCGGCAAGCGCAAATTTTGCGACATCGCGTCTGGTGTATTGCATGGTGACCTCGGGTGAAAGGCAATCGTAA CATGTGGAACTTTTCGTAGT
Downstream 100 bases:
>100_bases GCCTAACCTTCCCACCCGGATTGCGTCGGAGTAGGAATGCGGCAGAACCTGCGATTCGCGCTCCGGATGATGATCAAGAG CCCTGGCTTCACCGCCGTCG
Product: beta-N-acetylhexosaminidase
Products: NA
Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 663; Mature: 663
Protein sequence:
>663_residues MEVMLRYALFCALLSSAHAAAPALMPLPATMRPAAGKLTIDSSFKATLSGAADAHLEAAIARFTAQLSRQTGIPMFANKG AAARLRVECASAGGEVPKLGDNEAYTLDVTADGATLKAPERAGVLHGLATFAQLVMLGDQGYEVPAVHIEDRPRFPWRGL MLDSARHFMPLAVVKRNLDAMAAVKLNVFHWHLSEDQGFRVESKRYPKLQEKGSDGLFYTQSEIRDIVSYARDRGIRVVP EFDIPGHTTAWMVGYPELGTVPGPYEIGRKWGVYENALDPSREETYTFLDNFFEEITPLFADLYFHIGGDEVVARQWNAS ARVQAWAKEHNLKDAHAIQAYFNTRVQKLLQKRGKVLIGWDEVLHPDLPKDIVVQSWRGQKSLAEAATKGYRGILSWGYY LDHLSPAKFHYGVDPMSSDADKLAPEQASRILGGEACMWAEYTTSETVDSRIWPRAAVIAERLWSPAATVDVESMYTRME AVSRELEWTGVQHRANYAPMLDRMTGGAPAEPLRILADAVEGLGLSPRARVAKYTSLTPMNRLADAARPESESVHALELA AAKVAADPNGSTAEAAALRTAFTRWAANDARFQELAAGNPLLAELKPLSKDLAALGNAGLALLDGRPAPAGFAAELTRME RPLAEVSLAATRPVKILLNAGRK
Sequences:
>Translated_663_residues MEVMLRYALFCALLSSAHAAAPALMPLPATMRPAAGKLTIDSSFKATLSGAADAHLEAAIARFTAQLSRQTGIPMFANKG AAARLRVECASAGGEVPKLGDNEAYTLDVTADGATLKAPERAGVLHGLATFAQLVMLGDQGYEVPAVHIEDRPRFPWRGL MLDSARHFMPLAVVKRNLDAMAAVKLNVFHWHLSEDQGFRVESKRYPKLQEKGSDGLFYTQSEIRDIVSYARDRGIRVVP EFDIPGHTTAWMVGYPELGTVPGPYEIGRKWGVYENALDPSREETYTFLDNFFEEITPLFADLYFHIGGDEVVARQWNAS ARVQAWAKEHNLKDAHAIQAYFNTRVQKLLQKRGKVLIGWDEVLHPDLPKDIVVQSWRGQKSLAEAATKGYRGILSWGYY LDHLSPAKFHYGVDPMSSDADKLAPEQASRILGGEACMWAEYTTSETVDSRIWPRAAVIAERLWSPAATVDVESMYTRME AVSRELEWTGVQHRANYAPMLDRMTGGAPAEPLRILADAVEGLGLSPRARVAKYTSLTPMNRLADAARPESESVHALELA AAKVAADPNGSTAEAAALRTAFTRWAANDARFQELAAGNPLLAELKPLSKDLAALGNAGLALLDGRPAPAGFAAELTRME RPLAEVSLAATRPVKILLNAGRK >Mature_663_residues MEVMLRYALFCALLSSAHAAAPALMPLPATMRPAAGKLTIDSSFKATLSGAADAHLEAAIARFTAQLSRQTGIPMFANKG AAARLRVECASAGGEVPKLGDNEAYTLDVTADGATLKAPERAGVLHGLATFAQLVMLGDQGYEVPAVHIEDRPRFPWRGL MLDSARHFMPLAVVKRNLDAMAAVKLNVFHWHLSEDQGFRVESKRYPKLQEKGSDGLFYTQSEIRDIVSYARDRGIRVVP EFDIPGHTTAWMVGYPELGTVPGPYEIGRKWGVYENALDPSREETYTFLDNFFEEITPLFADLYFHIGGDEVVARQWNAS ARVQAWAKEHNLKDAHAIQAYFNTRVQKLLQKRGKVLIGWDEVLHPDLPKDIVVQSWRGQKSLAEAATKGYRGILSWGYY LDHLSPAKFHYGVDPMSSDADKLAPEQASRILGGEACMWAEYTTSETVDSRIWPRAAVIAERLWSPAATVDVESMYTRME AVSRELEWTGVQHRANYAPMLDRMTGGAPAEPLRILADAVEGLGLSPRARVAKYTSLTPMNRLADAARPESESVHALELA AAKVAADPNGSTAEAAALRTAFTRWAANDARFQELAAGNPLLAELKPLSKDLAALGNAGLALLDGRPAPAGFAAELTRME RPLAEVSLAATRPVKILLNAGRK
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
Organism=Homo sapiens, GI189181666, Length=425, Percent_Identity=36.9411764705882, Blast_Score=273, Evalue=5e-73, Organism=Homo sapiens, GI4504373, Length=491, Percent_Identity=32.9938900203666, Blast_Score=258, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17569815, Length=448, Percent_Identity=30.8035714285714, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI24657468, Length=421, Percent_Identity=31.5914489311164, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI17647501, Length=421, Percent_Identity=31.5914489311164, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI281365639, Length=518, Percent_Identity=29.9227799227799, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI24657474, Length=518, Percent_Identity=29.9227799227799, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI17933586, Length=406, Percent_Identity=32.0197044334975, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI24653074, Length=436, Percent_Identity=28.2110091743119, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI45551090, Length=436, Percent_Identity=28.2110091743119, Blast_Score=163, Evalue=5e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR011658 [H]
Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 72509; Mature: 72509
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVMLRYALFCALLSSAHAAAPALMPLPATMRPAAGKLTIDSSFKATLSGAADAHLEAAI CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCHHHHHHHH ARFTAQLSRQTGIPMFANKGAAARLRVECASAGGEVPKLGDNEAYTLDVTADGATLKAPE HHHHHHHHHHCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEECCCH RAGVLHGLATFAQLVMLGDQGYEVPAVHIEDRPRFPWRGLMLDSARHFMPLAVVKRNLDA HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHCHHHHHHHHHHHHCCHH MAAVKLNVFHWHLSEDQGFRVESKRYPKLQEKGSDGLFYTQSEIRDIVSYARDRGIRVVP HEEEEEEEEEEEECCCCCCEECCCCCCCHHHCCCCCEEEEHHHHHHHHHHHHCCCCEEEE EFDIPGHTTAWMVGYPELGTVPGPYEIGRKWGVYENALDPSREETYTFLDNFFEEITPLF CCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ADLYFHIGGDEVVARQWNASARVQAWAKEHNLKDAHAIQAYFNTRVQKLLQKRGKVLIGW HHHHHCCCCCCEEHECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEH DEVLHPDLPKDIVVQSWRGQKSLAEAATKGYRGILSWGYYLDHLSPAKFHYGVDPMSSDA HHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCH DKLAPEQASRILGGEACMWAEYTTSETVDSRIWPRAAVIAERLWSPAATVDVESMYTRME HHCCHHHHHHHHCCCEEEEEECCCCHHHHHHHCHHHHHHHHHHCCCCCCEEHHHHHHHHH AVSRELEWTGVQHRANYAPMLDRMTGGAPAEPLRILADAVEGLGLSPRARVAKYTSLTPM HHHHHHHHCCCHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHH NRLADAARPESESVHALELAAAKVAADPNGSTAEAAALRTAFTRWAANDARFQELAAGNP HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCC LLAELKPLSKDLAALGNAGLALLDGRPAPAGFAAELTRMERPLAEVSLAATRPVKILLNA HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCCEEEEECC GRK CCC >Mature Secondary Structure MEVMLRYALFCALLSSAHAAAPALMPLPATMRPAAGKLTIDSSFKATLSGAADAHLEAAI CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCHHHHHHHH ARFTAQLSRQTGIPMFANKGAAARLRVECASAGGEVPKLGDNEAYTLDVTADGATLKAPE HHHHHHHHHHCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEECCCH RAGVLHGLATFAQLVMLGDQGYEVPAVHIEDRPRFPWRGLMLDSARHFMPLAVVKRNLDA HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHCHHHHHHHHHHHHCCHH MAAVKLNVFHWHLSEDQGFRVESKRYPKLQEKGSDGLFYTQSEIRDIVSYARDRGIRVVP HEEEEEEEEEEEECCCCCCEECCCCCCCHHHCCCCCEEEEHHHHHHHHHHHHCCCCEEEE EFDIPGHTTAWMVGYPELGTVPGPYEIGRKWGVYENALDPSREETYTFLDNFFEEITPLF CCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ADLYFHIGGDEVVARQWNASARVQAWAKEHNLKDAHAIQAYFNTRVQKLLQKRGKVLIGW HHHHHCCCCCCEEHECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEH DEVLHPDLPKDIVVQSWRGQKSLAEAATKGYRGILSWGYYLDHLSPAKFHYGVDPMSSDA HHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCH DKLAPEQASRILGGEACMWAEYTTSETVDSRIWPRAAVIAERLWSPAATVDVESMYTRME HHCCHHHHHHHHCCCEEEEEECCCCHHHHHHHCHHHHHHHHHHCCCCCCEEHHHHHHHHH AVSRELEWTGVQHRANYAPMLDRMTGGAPAEPLRILADAVEGLGLSPRARVAKYTSLTPM HHHHHHHHCCCHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHH NRLADAARPESESVHALELAAAKVAADPNGSTAEAAALRTAFTRWAANDARFQELAAGNP HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCC LLAELKPLSKDLAALGNAGLALLDGRPAPAGFAAELTRMERPLAEVSLAATRPVKILLNA HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCCEEEEECC GRK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7881557; 12949112 [H]