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The map label for this gene is 116625619

Identifier: 116625619

GI number: 116625619

Start: 8230418

End: 8231365

Strand: Reverse

Name: 116625619

Synonym: Acid_6568

Alternate gene names: NA

Gene position: 8231365-8230418 (Counterclockwise)

Preceding gene: 116625623

Following gene: 116625617

Centisome position: 82.6

GC content: 58.97

Gene sequence:

>948_bases
ATGCAATACACCAGACGCGATGTCGCAAAATTTGCGCTTGCCGCCTTACCGGCAGCCAAACTGCTGGCCAAGGCCAACTC
CAAATGGGGAGGCGTACAGATCGGGATCAATGCCCCGTACAGCTTCCACAACATGCCGCCGGGCGCCGACGACATTCTGA
AATATCTGGACCAGCTCGGCTTGAATGCCGTGGAACTGCGCTCGCAGCCTGTAGAATCTTTCCTGCAGGCGCCTGTGGTC
CCGCCGCCCGCAGGCCGCGGCAAGCCGCCTTTGACTCCGGAACAGGAAGCCGCCCGCAAGGCTGCGATGGAAGACCTGCA
GAAGTGGCGCCTGGCGCTCTCCGTGGACAAGATGAAGAGCTTCCGGAAGAAATACAACGATGCCGGAGTGCTCATCGAAA
TCGTGAAGATCGATGGCATCGATGCCATGCCGGACGATGTGGTGGACTACTGTTTCACGCTCGCCAAGGCACTCGGCGCG
AAGGCGCTCTCGTGCGAGATCCCGTTGAGCAAGACCAAGCGGCTCGGCGAATTCGCCCTCAAACACAAGCTCATGGTGGG
CTATCACGGCCACGCCAACGTGACCAGTCCGGAGGCATTCGGCCGCCCCGAAAGTTGGGAGACGGCGATGAGCTATTCCA
AGTACAACGGCATCAACCTGGACATCGGCCACTTCATCGCTGGCAATAACGTTTCGCCGGTGGAGTTCATCAAGAAGCAC
CATGATCGCATCACTCACGTCCATATCAAGGATCGGAAGATGCAGAACGGCCCCAACGTTCCTTTCGGCCAGGGCGACAC
CCCCATCAAGGAAGTGCTCCAGCTCATGAAGACGGAAAAGTATCCGTTTCAGGGCACCATCGAGTTCGAGTACCCGGTAC
CCGCCGGCTCCGACGTGCTCACCGAAATCGCCAAGTGCGTTGAGTACTGCAAGAACGCGCTGGCGTAG

Upstream 100 bases:

>100_bases
GAGCACTGGAAAGAAGGGCGCAAAAGAGCGCATATCGAAGCATCACCTCCATACTACGAAAAGTTCCACATGTTACGATT
GCCTTTCACCCGAGGTCACC

Downstream 100 bases:

>100_bases
ATAACCCGCCCTACTGCAGCACGGGCAGCGTCAAGTAATTCTCCGGAATGAAGAAGCTGCCCTGCGTAATCCCCTGCGGC
GTGATCTTTTGCAACCGCTG

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; 16S RRNA-Processing Protein; Xylose Isomerase Domain-Containing Protein TIM Barrel

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MQYTRRDVAKFALAALPAAKLLAKANSKWGGVQIGINAPYSFHNMPPGADDILKYLDQLGLNAVELRSQPVESFLQAPVV
PPPAGRGKPPLTPEQEAARKAAMEDLQKWRLALSVDKMKSFRKKYNDAGVLIEIVKIDGIDAMPDDVVDYCFTLAKALGA
KALSCEIPLSKTKRLGEFALKHKLMVGYHGHANVTSPEAFGRPESWETAMSYSKYNGINLDIGHFIAGNNVSPVEFIKKH
HDRITHVHIKDRKMQNGPNVPFGQGDTPIKEVLQLMKTEKYPFQGTIEFEYPVPAGSDVLTEIAKCVEYCKNALA

Sequences:

>Translated_315_residues
MQYTRRDVAKFALAALPAAKLLAKANSKWGGVQIGINAPYSFHNMPPGADDILKYLDQLGLNAVELRSQPVESFLQAPVV
PPPAGRGKPPLTPEQEAARKAAMEDLQKWRLALSVDKMKSFRKKYNDAGVLIEIVKIDGIDAMPDDVVDYCFTLAKALGA
KALSCEIPLSKTKRLGEFALKHKLMVGYHGHANVTSPEAFGRPESWETAMSYSKYNGINLDIGHFIAGNNVSPVEFIKKH
HDRITHVHIKDRKMQNGPNVPFGQGDTPIKEVLQLMKTEKYPFQGTIEFEYPVPAGSDVLTEIAKCVEYCKNALA
>Mature_315_residues
MQYTRRDVAKFALAALPAAKLLAKANSKWGGVQIGINAPYSFHNMPPGADDILKYLDQLGLNAVELRSQPVESFLQAPVV
PPPAGRGKPPLTPEQEAARKAAMEDLQKWRLALSVDKMKSFRKKYNDAGVLIEIVKIDGIDAMPDDVVDYCFTLAKALGA
KALSCEIPLSKTKRLGEFALKHKLMVGYHGHANVTSPEAFGRPESWETAMSYSKYNGINLDIGHFIAGNNVSPVEFIKKH
HDRITHVHIKDRKMQNGPNVPFGQGDTPIKEVLQLMKTEKYPFQGTIEFEYPVPAGSDVLTEIAKCVEYCKNALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34801; Mature: 34801

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYTRRDVAKFALAALPAAKLLAKANSKWGGVQIGINAPYSFHNMPPGADDILKYLDQLG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHC
LNAVELRSQPVESFLQAPVVPPPAGRGKPPLTPEQEAARKAAMEDLQKWRLALSVDKMKS
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRKKYNDAGVLIEIVKIDGIDAMPDDVVDYCFTLAKALGAKALSCEIPLSKTKRLGEFAL
HHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHH
KHKLMVGYHGHANVTSPEAFGRPESWETAMSYSKYNGINLDIGHFIAGNNVSPVEFIKKH
HHHHHEEECCCCCCCCCHHCCCCCCHHHHHHHHHCCCCEEECCCEECCCCCCHHHHHHHH
HDRITHVHIKDRKMQNGPNVPFGQGDTPIKEVLQLMKTEKYPFQGTIEFEYPVPAGSDVL
HCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHH
TEIAKCVEYCKNALA
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MQYTRRDVAKFALAALPAAKLLAKANSKWGGVQIGINAPYSFHNMPPGADDILKYLDQLG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHC
LNAVELRSQPVESFLQAPVVPPPAGRGKPPLTPEQEAARKAAMEDLQKWRLALSVDKMKS
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRKKYNDAGVLIEIVKIDGIDAMPDDVVDYCFTLAKALGAKALSCEIPLSKTKRLGEFAL
HHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHH
KHKLMVGYHGHANVTSPEAFGRPESWETAMSYSKYNGINLDIGHFIAGNNVSPVEFIKKH
HHHHHEEECCCCCCCCCHHCCCCCCHHHHHHHHHCCCCEEECCCEECCCCCCHHHHHHHH
HDRITHVHIKDRKMQNGPNVPFGQGDTPIKEVLQLMKTEKYPFQGTIEFEYPVPAGSDVL
HCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHH
TEIAKCVEYCKNALA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA