Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116625623

Identifier: 116625623

GI number: 116625623

Start: 8236088

End: 8237908

Strand: Reverse

Name: 116625623

Synonym: Acid_6572

Alternate gene names: NA

Gene position: 8237908-8236088 (Counterclockwise)

Preceding gene: 116625624

Following gene: 116625619

Centisome position: 82.66

GC content: 62.38

Gene sequence:

>1821_bases
ATGAACAAACTCGCCCTCTGCCTGATGGTCGGACTTACGTCACAACTGTTACCCGCCGCGACCGGGTATCTGGTACACAA
TCTGGTCGCCGACGCAGCCTCAACGGTAACTCCGCCTGCCGATAATATCGATCCGCGGCTGGTCAACGCCTGGGGATTGG
TCGCCTCCGCGACAAGCCCTTTCTGGGTGTGCGATGCCGGTACAGGCCTCTCCACGGTGTACACGGTCAACGCGACCAAC
ACCACGGCTTTGGGACTACCCAACCCCACGACGCAACCGACGGTCCCCGGGGCGGGAGGCGTGCCGAAAGGCGTTTGTAC
CGGCATTGTGGCTAATACAGCACCGGCCACTACGCCGGTAACTTTTCCTGTGACCGCGCCCGGAAAAGCCGCCGTTGCCG
CGAGCTTCATCTTCGTCACCGAGGATGGAGTGCTCTCCGCGTGGGCGAATGGCGCCGATGCGACACAGGCCTTTGTGGAA
GCCGATAACTCGAAGACGGCGGTCTATAAAGGACTGGCGCTTGTGACTACGCCTGTGGTGCAACTGTACCTGGCCAATTT
TAAGGCCGGAACCATCGACGTATATGACGCGCAATTCAAGCCGGTAACTCTTGCCGCGGGCGCTTTTGCGGACACCAAGA
TACCGGCGGGCTTCGCTCCATTTAACATTTGGAACCTCGGCGGTAAGTTGTACGTGGCCTACGCCAAGCAGGACGCGAAT
CAGAAGTTCGATGTCGCCGGTGCCGGCAACGGATATGTCGATGTGTTTGACACTACGGGCAAGCTGCTTCAATCACTCGT
GGTTGGAGGCACGGGCAGCCTGCTGAATTCGCCGTGGGGCCTGGCGATTGCGCCCGCGACTTTCGGCAAGTTCGCCAACG
ACCTGCTGGTAGGGAACTTCGGTGACGGCACGATCAATGCATACGACCCGACGACCGGCGCATTCGCCGGCACACTGCAG
GACGCCAGCGGCAAGAACATCGTGATCCCCGGTCTGTGGGCGCTCACCTTCGGCAATGGCAGCAGCGGCGGCGATAAGGA
CACGCTGTACTTCGCCGCCGGGCCGGGCGGCTCGAAGCACGGCCTTCTCGGCAGCATTTCCGCCAACCCCAACGTGGTCA
GCACCGCCATCACGAACGCCGCGCAGGTTGCCGGCGGAATCGCCGCGAACACCTACGTCACCATTAAGGGCACCAACCTG
GCGGCCACCAAGCGCTCCTGGGTCGCGGCCGATTTCGGCACTACCGGCAAGGCGCTGCCGACCGCGCTCGATGGCGTGAG
CGTCACGATCAACGGCGAACCGGCGTACATCTCCTACATCAGCCCGGTGCAGATCAACCTGCTGACGCCGACCGACCTGC
CTTCGAGCGGCCAAGTCACCGTAGTGGTGACTGACAACACTCTGACCAGCACCACGGTCAACGTTTCCCCGCAGGCAGTC
GCACCCTCATTCTTCCTGCTGGATGCAGCGGGACACATCGCGGCGACGCATGCCAACAACTCGCTCATTGGGACCACGGC
TCCCGCGACACCGGCCGCGCCGGGAGAGACGATCGTGCTGTACGGCAACGGGTTCGGACCCACCAACCCATCGGCCCTGA
CCGGCCAAGCCGTCACCTCAGCCGCGCCGATGCTGGTAACTCCCACCGTCACGTTCAACGGTAACAACGCCAATGTCGTG
TTCGCGGGGCTCACTGGAACTGGCTTGTACCAATTCAACGTGGTGGTTCCCTCCGGATTGGCGGACGGCGATGCCGCGGT
GGTCGCGAAGGCTGCGGGCGTGAGTTCCCCAAGCGGCGCGCTGATTACGATTAAGAACTGA

Upstream 100 bases:

>100_bases
CGGTCCTCACGCTGGAGCTGAGGGGCTAACGCGGCAGGATTGTTAAATCATCGGCATGGATATTGTTCCGGCCTCTTAGT
CTCTGTATGCTGTGGATGCC

Downstream 100 bases:

>100_bases
GGTTTCGGCGATTCAAGTTGCCGGACGCTCCCTGACGGTCGCGGCTCGGACCTGCGCACGTGAGGTCTGTGAAGAATTCG
AAACGGGCAAGCTAAAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 606; Mature: 606

Protein sequence:

>606_residues
MNKLALCLMVGLTSQLLPAATGYLVHNLVADAASTVTPPADNIDPRLVNAWGLVASATSPFWVCDAGTGLSTVYTVNATN
TTALGLPNPTTQPTVPGAGGVPKGVCTGIVANTAPATTPVTFPVTAPGKAAVAASFIFVTEDGVLSAWANGADATQAFVE
ADNSKTAVYKGLALVTTPVVQLYLANFKAGTIDVYDAQFKPVTLAAGAFADTKIPAGFAPFNIWNLGGKLYVAYAKQDAN
QKFDVAGAGNGYVDVFDTTGKLLQSLVVGGTGSLLNSPWGLAIAPATFGKFANDLLVGNFGDGTINAYDPTTGAFAGTLQ
DASGKNIVIPGLWALTFGNGSSGGDKDTLYFAAGPGGSKHGLLGSISANPNVVSTAITNAAQVAGGIAANTYVTIKGTNL
AATKRSWVAADFGTTGKALPTALDGVSVTINGEPAYISYISPVQINLLTPTDLPSSGQVTVVVTDNTLTSTTVNVSPQAV
APSFFLLDAAGHIAATHANNSLIGTTAPATPAAPGETIVLYGNGFGPTNPSALTGQAVTSAAPMLVTPTVTFNGNNANVV
FAGLTGTGLYQFNVVVPSGLADGDAAVVAKAAGVSSPSGALITIKN

Sequences:

>Translated_606_residues
MNKLALCLMVGLTSQLLPAATGYLVHNLVADAASTVTPPADNIDPRLVNAWGLVASATSPFWVCDAGTGLSTVYTVNATN
TTALGLPNPTTQPTVPGAGGVPKGVCTGIVANTAPATTPVTFPVTAPGKAAVAASFIFVTEDGVLSAWANGADATQAFVE
ADNSKTAVYKGLALVTTPVVQLYLANFKAGTIDVYDAQFKPVTLAAGAFADTKIPAGFAPFNIWNLGGKLYVAYAKQDAN
QKFDVAGAGNGYVDVFDTTGKLLQSLVVGGTGSLLNSPWGLAIAPATFGKFANDLLVGNFGDGTINAYDPTTGAFAGTLQ
DASGKNIVIPGLWALTFGNGSSGGDKDTLYFAAGPGGSKHGLLGSISANPNVVSTAITNAAQVAGGIAANTYVTIKGTNL
AATKRSWVAADFGTTGKALPTALDGVSVTINGEPAYISYISPVQINLLTPTDLPSSGQVTVVVTDNTLTSTTVNVSPQAV
APSFFLLDAAGHIAATHANNSLIGTTAPATPAAPGETIVLYGNGFGPTNPSALTGQAVTSAAPMLVTPTVTFNGNNANVV
FAGLTGTGLYQFNVVVPSGLADGDAAVVAKAAGVSSPSGALITIKN
>Mature_606_residues
MNKLALCLMVGLTSQLLPAATGYLVHNLVADAASTVTPPADNIDPRLVNAWGLVASATSPFWVCDAGTGLSTVYTVNATN
TTALGLPNPTTQPTVPGAGGVPKGVCTGIVANTAPATTPVTFPVTAPGKAAVAASFIFVTEDGVLSAWANGADATQAFVE
ADNSKTAVYKGLALVTTPVVQLYLANFKAGTIDVYDAQFKPVTLAAGAFADTKIPAGFAPFNIWNLGGKLYVAYAKQDAN
QKFDVAGAGNGYVDVFDTTGKLLQSLVVGGTGSLLNSPWGLAIAPATFGKFANDLLVGNFGDGTINAYDPTTGAFAGTLQ
DASGKNIVIPGLWALTFGNGSSGGDKDTLYFAAGPGGSKHGLLGSISANPNVVSTAITNAAQVAGGIAANTYVTIKGTNL
AATKRSWVAADFGTTGKALPTALDGVSVTINGEPAYISYISPVQINLLTPTDLPSSGQVTVVVTDNTLTSTTVNVSPQAV
APSFFLLDAAGHIAATHANNSLIGTTAPATPAAPGETIVLYGNGFGPTNPSALTGQAVTSAAPMLVTPTVTFNGNNANVV
FAGLTGTGLYQFNVVVPSGLADGDAAVVAKAAGVSSPSGALITIKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60662; Mature: 60662

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLALCLMVGLTSQLLPAATGYLVHNLVADAASTVTPPADNIDPRLVNAWGLVASATSP
CCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCC
FWVCDAGTGLSTVYTVNATNTTALGLPNPTTQPTVPGAGGVPKGVCTGIVANTAPATTPV
EEEEECCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHEEECCCCCCCCE
TFPVTAPGKAAVAASFIFVTEDGVLSAWANGADATQAFVEADNSKTAVYKGLALVTTPVV
EEEECCCCCCEEEEEEEEEECCCEEEECCCCCCHHHHEEECCCCCEEECCCCHHHHHHHH
QLYLANFKAGTIDVYDAQFKPVTLAAGAFADTKIPAGFAPFNIWNLGGKLYVAYAKQDAN
HHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCC
QKFDVAGAGNGYVDVFDTTGKLLQSLVVGGTGSLLNSPWGLAIAPATFGKFANDLLVGNF
CEEEEEECCCCEEEEECCHHHHHHHHHCCCCCHHHCCCCCEEECCHHHHHHHCCEEEEEC
GDGTINAYDPTTGAFAGTLQDASGKNIVIPGLWALTFGNGSSGGDKDTLYFAAGPGGSKH
CCCEEEECCCCCCCEEEEEECCCCCEEEECCEEEEEECCCCCCCCCCEEEEEECCCCCCC
GLLGSISANPNVVSTAITNAAQVAGGIAANTYVTIKGTNLAATKRSWVAADFGTTGKALP
CEEEEECCCCCEEEHHHHHHHHHCCCEEECEEEEEECCCEEECCCCEEEEECCCCCCCCC
TALDGVSVTINGEPAYISYISPVQINLLTPTDLPSSGQVTVVVTDNTLTSTTVNVSPQAV
CCCCCEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCHHC
APSFFLLDAAGHIAATHANNSLIGTTAPATPAAPGETIVLYGNGFGPTNPSALTGQAVTS
CCEEEEEECCCCEEEEECCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHC
AAPMLVTPTVTFNGNNANVVFAGLTGTGLYQFNVVVPSGLADGDAAVVAKAAGVSSPSGA
CCCEEEEEEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCE
LITIKN
EEEEEC
>Mature Secondary Structure
MNKLALCLMVGLTSQLLPAATGYLVHNLVADAASTVTPPADNIDPRLVNAWGLVASATSP
CCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCC
FWVCDAGTGLSTVYTVNATNTTALGLPNPTTQPTVPGAGGVPKGVCTGIVANTAPATTPV
EEEEECCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHEEECCCCCCCCE
TFPVTAPGKAAVAASFIFVTEDGVLSAWANGADATQAFVEADNSKTAVYKGLALVTTPVV
EEEECCCCCCEEEEEEEEEECCCEEEECCCCCCHHHHEEECCCCCEEECCCCHHHHHHHH
QLYLANFKAGTIDVYDAQFKPVTLAAGAFADTKIPAGFAPFNIWNLGGKLYVAYAKQDAN
HHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCC
QKFDVAGAGNGYVDVFDTTGKLLQSLVVGGTGSLLNSPWGLAIAPATFGKFANDLLVGNF
CEEEEEECCCCEEEEECCHHHHHHHHHCCCCCHHHCCCCCEEECCHHHHHHHCCEEEEEC
GDGTINAYDPTTGAFAGTLQDASGKNIVIPGLWALTFGNGSSGGDKDTLYFAAGPGGSKH
CCCEEEECCCCCCCEEEEEECCCCCEEEECCEEEEEECCCCCCCCCCEEEEEECCCCCCC
GLLGSISANPNVVSTAITNAAQVAGGIAANTYVTIKGTNLAATKRSWVAADFGTTGKALP
CEEEEECCCCCEEEHHHHHHHHHCCCEEECEEEEEECCCEEECCCCEEEEECCCCCCCCC
TALDGVSVTINGEPAYISYISPVQINLLTPTDLPSSGQVTVVVTDNTLTSTTVNVSPQAV
CCCCCEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCHHC
APSFFLLDAAGHIAATHANNSLIGTTAPATPAAPGETIVLYGNGFGPTNPSALTGQAVTS
CCEEEEEECCCCEEEEECCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHC
AAPMLVTPTVTFNGNNANVVFAGLTGTGLYQFNVVVPSGLADGDAAVVAKAAGVSSPSGA
CCCEEEEEEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCE
LITIKN
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA