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The map label for this gene is hypC [H]

Identifier: 116625602

GI number: 116625602

Start: 8214446

End: 8214730

Strand: Direct

Name: hypC [H]

Synonym: Acid_6551

Alternate gene names: 116625602

Gene position: 8214446-8214730 (Clockwise)

Preceding gene: 116625601

Following gene: 116625603

Centisome position: 82.43

GC content: 60.35

Gene sequence:

>285_bases
ATGTGCCTGGCTATCCCGGGTAGGATCGTGGAATTCCACGAGAATCACGGCGTGCGGATGTCGAAGGTGGATTTCGGCGG
CATCACGCGAGAGGCCTGCCTGGAGTATGTCCCGGATGCGAAGCTCGGCGACTATGTCCTGGTGCACGTCGGCTTTGCCA
TCAGTAAGGTGGATGAGGAAGAGGCGGCGCGCACCTACCGTTACCTTGAGGAAATGGGTCAGCTCAGCGAGGTGACTTCC
GCGGACATCGATACCGCGCCGGAGGCCGGCGATGAAGTACCTTGA

Upstream 100 bases:

>100_bases
CGTGGGATTGATCCGCCTTGTGCGAAGCGTCACCCCGAGTGCACGCTGTGCATGAAATCTCACGGCTGACCGCAAACTCC
GGCACTATGATGAAAAGCGC

Downstream 100 bases:

>100_bases
CGAGTACCGCGACGACCGGATCGCGAAGAAGGTGGTGGACGAGATCCGGCGGACGGTCACGCGGCCGTGGGTGATTATGG
AGGTCTGCGGCGGGCAGACG

Product: hydrogenase assembly chaperone hypC/hupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MCLAIPGRIVEFHENHGVRMSKVDFGGITREACLEYVPDAKLGDYVLVHVGFAISKVDEEEAARTYRYLEEMGQLSEVTS
ADIDTAPEAGDEVP

Sequences:

>Translated_94_residues
MCLAIPGRIVEFHENHGVRMSKVDFGGITREACLEYVPDAKLGDYVLVHVGFAISKVDEEEAARTYRYLEEMGQLSEVTS
ADIDTAPEAGDEVP
>Mature_94_residues
MCLAIPGRIVEFHENHGVRMSKVDFGGITREACLEYVPDAKLGDYVLVHVGFAISKVDEEEAARTYRYLEEMGQLSEVTS
ADIDTAPEAGDEVP

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 10360; Mature: 10360

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLAIPGRIVEFHENHGVRMSKVDFGGITREACLEYVPDAKLGDYVLVHVGFAISKVDEE
CEECCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHCCHH
EAARTYRYLEEMGQLSEVTSADIDTAPEAGDEVP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCLAIPGRIVEFHENHGVRMSKVDFGGITREACLEYVPDAKLGDYVLVHVGFAISKVDEE
CEECCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHCCHH
EAARTYRYLEEMGQLSEVTSADIDTAPEAGDEVP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]