| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625599
Identifier: 116625599
GI number: 116625599
Start: 8208716
End: 8210149
Strand: Direct
Name: 116625599
Synonym: Acid_6548
Alternate gene names: NA
Gene position: 8208716-8210149 (Clockwise)
Preceding gene: 116625598
Following gene: 116625600
Centisome position: 82.37
GC content: 62.55
Gene sequence:
>1434_bases ATGGACCGCGAAGAGTTCCTGAAAATCCAATCGCGCCGCAAGTTTTTCCGGGAGTGCGCGGGCGGCATCGGAACGGTGGC GCTGGCACAGTTGCTGGCGAGCGAGGGGCGCGCGGGAACGCCGGAGCAGAATCCGCTGGCGCCGCGCAAGCCGCACTTCG CGCCTAAGGCGAAGAACGTAATCTTCATGTTCATGGAGGGCGGGCCGAGTCAGCTCGACCTCTTCGACCCGAAGCCGGAG CTCAGGAAATGGCACGGCAAGCCGCTTCCGGCGGAGATGACAAAGGACCTGCGTCTGGCGTTCACGAAGCCGAACGCGGC GGTGCTAGCGAGTCCGCGCACGTTCACGCCGCATGGGAAAAGCGGCATCGAGTTTTCGGACTTCATCCCCAATATCGGGT CCTGCGCGGACGATTTATGCCTGGTGCGTTCGATGTACACGGACGCGTTCAATCACCATCCCGGGCAGCTGCTGCTGTTC GGTGGGAGCATCCAGGTGGGGCGTCCGACGATGGGCGCGTGGGTGCTGTACGGGCTCGGGAGCGAGTCGCAGAATCTGCC GGGGTTTGTGGTGCTGAGCTCGGGCGTGGGAACGAGCGGCGGGTCATCGAACTGGAGCAGCGGATTTCTGCCGTCAACGT ACCAGGGGGTGGTGCTGCGCAGCGCGGGCGATCCGGTGCTGTACCTTTCGAATCCGCCGGGGGTCACGCGCGAGATGCAG CGGGCGGGGCTGGACACCCTGAAGGACCTCAATGAGGAGCATTACGCGGCGACGGGCGATCTGGAGATCGCGGCGCGGAT CTCGTCGTACGAGCTCGGGTTCCGGATGCAGATGGCGGGGCCGGAGTTGCTCGATTTCTCGAAGGAGAGCGCGGCGACGC TGGCGATGTACGGGGTCAACGAAGAGCCGACGAAACAGTTCGCGACCAACTGTCTGCTGGCGCGGCGGATGGTGGAGCGC GGGGTGCGGTTCGTGATGCTCAACCATGCAAGTTGGGACGATCACACGGAACTGAACAAGAAGTTGAAGAAGAACTGCGA TATCGCCGATAAGCCCACCGCCGCACTGATCAAGGATCTGAAGCAGCGCGGGATGTTGGACGATACGCTGGTGGTGTGGG CCGGCGAATTCGGGCGCACGCCGATGGTGGAAATCCGCAATCCGCGGGATGCGGAGAATGGCGGACGCGATCATCATCCG CTGGCATACAGTTTGTTCCTGGCCGGTGGCGGGATCAAGGGTGGAACCATCGTTGGGAAGACGGACGAGCTTTGCATGAC CGTGACGGAGGACAAAGTTCACGTGCATGACTTGCAGGCGACACTGCTGCACTGTCTGGGTCTGGAGCATACGCGGCTTA CGTTTCATCACATGGGGCGCGATTTCCGGCTGACGGACGTGGAAGGCAAGGTCGTGAGCAAGATGTTAGCTTAG
Upstream 100 bases:
>100_bases CGAATCAGTTGGAAGGCATTCCGCAGGCCGAGGCAGCGGCTTGGGTGGAGTTGAGCCGGGTGCTGCTCAACCTGGACGAG TTCATTACGAGGGATTAAAT
Downstream 100 bases:
>100_bases CGAAGTATCGCAACGAGACCGGCCAGGAGGCCTGTCTCACCGAGGAGAGTCAATTGCGAATCAGGAAAGCTGTGATTACG GCTGCGGGACAGAGCCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MDREEFLKIQSRRKFFRECAGGIGTVALAQLLASEGRAGTPEQNPLAPRKPHFAPKAKNVIFMFMEGGPSQLDLFDPKPE LRKWHGKPLPAEMTKDLRLAFTKPNAAVLASPRTFTPHGKSGIEFSDFIPNIGSCADDLCLVRSMYTDAFNHHPGQLLLF GGSIQVGRPTMGAWVLYGLGSESQNLPGFVVLSSGVGTSGGSSNWSSGFLPSTYQGVVLRSAGDPVLYLSNPPGVTREMQ RAGLDTLKDLNEEHYAATGDLEIAARISSYELGFRMQMAGPELLDFSKESAATLAMYGVNEEPTKQFATNCLLARRMVER GVRFVMLNHASWDDHTELNKKLKKNCDIADKPTAALIKDLKQRGMLDDTLVVWAGEFGRTPMVEIRNPRDAENGGRDHHP LAYSLFLAGGGIKGGTIVGKTDELCMTVTEDKVHVHDLQATLLHCLGLEHTRLTFHHMGRDFRLTDVEGKVVSKMLA
Sequences:
>Translated_477_residues MDREEFLKIQSRRKFFRECAGGIGTVALAQLLASEGRAGTPEQNPLAPRKPHFAPKAKNVIFMFMEGGPSQLDLFDPKPE LRKWHGKPLPAEMTKDLRLAFTKPNAAVLASPRTFTPHGKSGIEFSDFIPNIGSCADDLCLVRSMYTDAFNHHPGQLLLF GGSIQVGRPTMGAWVLYGLGSESQNLPGFVVLSSGVGTSGGSSNWSSGFLPSTYQGVVLRSAGDPVLYLSNPPGVTREMQ RAGLDTLKDLNEEHYAATGDLEIAARISSYELGFRMQMAGPELLDFSKESAATLAMYGVNEEPTKQFATNCLLARRMVER GVRFVMLNHASWDDHTELNKKLKKNCDIADKPTAALIKDLKQRGMLDDTLVVWAGEFGRTPMVEIRNPRDAENGGRDHHP LAYSLFLAGGGIKGGTIVGKTDELCMTVTEDKVHVHDLQATLLHCLGLEHTRLTFHHMGRDFRLTDVEGKVVSKMLA >Mature_477_residues MDREEFLKIQSRRKFFRECAGGIGTVALAQLLASEGRAGTPEQNPLAPRKPHFAPKAKNVIFMFMEGGPSQLDLFDPKPE LRKWHGKPLPAEMTKDLRLAFTKPNAAVLASPRTFTPHGKSGIEFSDFIPNIGSCADDLCLVRSMYTDAFNHHPGQLLLF GGSIQVGRPTMGAWVLYGLGSESQNLPGFVVLSSGVGTSGGSSNWSSGFLPSTYQGVVLRSAGDPVLYLSNPPGVTREMQ RAGLDTLKDLNEEHYAATGDLEIAARISSYELGFRMQMAGPELLDFSKESAATLAMYGVNEEPTKQFATNCLLARRMVER GVRFVMLNHASWDDHTELNKKLKKNCDIADKPTAALIKDLKQRGMLDDTLVVWAGEFGRTPMVEIRNPRDAENGGRDHHP LAYSLFLAGGGIKGGTIVGKTDELCMTVTEDKVHVHDLQATLLHCLGLEHTRLTFHHMGRDFRLTDVEGKVVSKMLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52352; Mature: 52352
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDREEFLKIQSRRKFFRECAGGIGTVALAQLLASEGRAGTPEQNPLAPRKPHFAPKAKNV CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE IFMFMEGGPSQLDLFDPKPELRKWHGKPLPAEMTKDLRLAFTKPNAAVLASPRTFTPHGK EEEEECCCCCEEECCCCCHHHHHHCCCCCCHHHCCCEEEEEECCCCEEEECCCCCCCCCC SGIEFSDFIPNIGSCADDLCLVRSMYTDAFNHHPGQLLLFGGSIQVGRPTMGAWVLYGLG CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCEEEEEECC SESQNLPGFVVLSSGVGTSGGSSNWSSGFLPSTYQGVVLRSAGDPVLYLSNPPGVTREMQ CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCHHHHHH RAGLDTLKDLNEEHYAATGDLEIAARISSYELGFRMQMAGPELLDFSKESAATLAMYGVN HCCHHHHHHCCHHHCCCCCCEEEEEEEECEECCEEEECCCCHHHCCCCCCCCEEEEECCC EEPTKQFATNCLLARRMVERGVRFVMLNHASWDDHTELNKKLKKNCDIADKPTAALIKDL CCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH KQRGMLDDTLVVWAGEFGRTPMVEIRNPRDAENGGRDHHPLAYSLFLAGGGIKGGTIVGK HHCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEECC TDELCMTVTEDKVHVHDLQATLLHCLGLEHTRLTFHHMGRDFRLTDVEGKVVSKMLA CCCEEEEEECCCEEHHHHHHHHHHHHCCCCCEEEHHHCCCCEEEECCCHHHHHHHCC >Mature Secondary Structure MDREEFLKIQSRRKFFRECAGGIGTVALAQLLASEGRAGTPEQNPLAPRKPHFAPKAKNV CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE IFMFMEGGPSQLDLFDPKPELRKWHGKPLPAEMTKDLRLAFTKPNAAVLASPRTFTPHGK EEEEECCCCCEEECCCCCHHHHHHCCCCCCHHHCCCEEEEEECCCCEEEECCCCCCCCCC SGIEFSDFIPNIGSCADDLCLVRSMYTDAFNHHPGQLLLFGGSIQVGRPTMGAWVLYGLG CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCEEEEEECC SESQNLPGFVVLSSGVGTSGGSSNWSSGFLPSTYQGVVLRSAGDPVLYLSNPPGVTREMQ CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCHHHHHH RAGLDTLKDLNEEHYAATGDLEIAARISSYELGFRMQMAGPELLDFSKESAATLAMYGVN HCCHHHHHHCCHHHCCCCCCEEEEEEEECEECCEEEECCCCHHHCCCCCCCCEEEEECCC EEPTKQFATNCLLARRMVERGVRFVMLNHASWDDHTELNKKLKKNCDIADKPTAALIKDL CCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH KQRGMLDDTLVVWAGEFGRTPMVEIRNPRDAENGGRDHHPLAYSLFLAGGGIKGGTIVGK HHCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEECC TDELCMTVTEDKVHVHDLQATLLHCLGLEHTRLTFHHMGRDFRLTDVEGKVVSKMLA CCCEEEEEECCCEEHHHHHHHHHHHHCCCCCEEEHHHCCCCEEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA