| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625598
Identifier: 116625598
GI number: 116625598
Start: 8206197
End: 8208713
Strand: Direct
Name: 116625598
Synonym: Acid_6547
Alternate gene names: NA
Gene position: 8206197-8208713 (Clockwise)
Preceding gene: 116625597
Following gene: 116625599
Centisome position: 82.34
GC content: 64.92
Gene sequence:
>2517_bases ATGCTCAGGACGGGGTGGCTGGCAGGAGCATTGGCAGTTTGCGGAGCGGCCCACGCGGCGGCGGTGGACTTCGCGCGCGA TATTGAGCCGCTGCTGACGAAGCGCTGTGTCGTGTGTCACGGGGCGCAGCAGCAGATGAGCGGATTCCGGCTGGATCAAC GCGACGCGGCGCTGAAGGGCGGGGCGTCGGGCGTGGATATCGTCCCGGGGAAGAGCGGCGAGAGCCGGTTGATCCGGCTG GTCTCGGGGCTCGAGAAGAAAGTGATGCCGCCGGTGGGGGCGCGGCTCACGGCGGAAGAGATTGGACTGCTGCGGGCGTG GATCGATCAGGGTGCGACGTGGCCTGCGACGAAGGCTCCGCACTGGTCGTTCCAGAAGATTCAGCGTCCGGCGGCGCCTG CGGTGCGCGATCGGGCGTGGGCGCGCAATGATATCGACAATTTCATTCTGGCTCGGCTGGAGCGGGAAGGGATTGCGCCC TCCGAGGAAGCGGGGAAACTGACGCTGATGCGGCGAGTGAGCCTGGATCTCACGGGACTGCCGCCAACGCCGGAGGAAGT GCGCGAGTATCTGGCGGACAATCGTCCGGACGCATACGAGCGGTTGGTGGACCGGCTGCTGGATTCGCCGCATTACGGGG AGAAGTGGGCGCGCTACTGGCTGGACCTGGCGCGGTACGCGGATAGCGACGGATACGAGAAGGATCGCTCGCGGCCGTGG GCGTGGCGCTACAGGCATTGGGTGATCGACGCGCTGAATCGCGACATGCCCTACGACGAGTTCACCACGGAACAACTGGC GGGCGACCTGCTGCCGAATCGTAATCTGGACACGCTGGTGGCGACCGGGTTCAACCGCAACACGCTGACCAATCGCGAGG GCGGTACCGATCCGGAGCAGTTTCGCGACGAGCAGGTGCTGGATCGCGCGGCGACGCTGGGGACGGTGTGGATGGGGCTG ACGGTGGGCTGCGCGCAATGCCACAACCATAAGTTCGACCCGATCAGCCAAAAGGAGTTTTATCAGCTCACGGCTTTTTT CAATACCCAGGAAGAGGTCAATATTCAGGCGCCGCTGGCCGGCGAACTGGGTCCTTACCTGGCGGCGAAGCCGGAGTATG ACCGCAAGCGGCGCGCGCTGCTGGAGGAGTACAAGATTCCCGAGGCGCTGGCGGATTACGAGAGCAAGCTGCGCGAGAGC GCGCTGCATCCGGGGCATCACGAGGATTGGGATTTTGCGTACGGCGAATTCACGCATACGGTGGACAACGCGAAGAAGGT GCTGTTCCTGGATCCGGCGAAGCGGAGCGAAGTGCAGCAGAACGCGCTGCTGGATGTATTCCTGGGGAGCTGCGGCAATC TCTATCCGAAGGAGCACTGCGACGAATTAAAAGTGCGCGACGTGCGCGCCAAGCTGAACGAGCTGAATGCGAAGCTGCCG CCGGTGAGTTACGCGCCGGTGCTGCTCGAGAACGACACGCCGCCGGTGAGTTACATCCACGTGAAGGGCGACTGGCGCGA GCACGGAGCGGAGGTGCAGCCGGGGACGCTGGCGGTGCTGCCGCCGCTGCCGGCGGGCGCAAAGGCATCGCGGCTCGTGC TGGCGCGGTGGCTCACGTCGCCGGAGCATCCGCTGACTTCGCGCGTGGCGGTGAACCGCATCTGGCAGGAAGTCTTCGGG CGCGGCATTGTAGGGACCAGCGAAGATTTCGGAACGCAAGGCGATCGTCCAACACATCCCGAACTGTTGGACTGGCTGGC GAGCGAGTACATGCGGCGCGGCTGGAGCACAAAGCAGATGGTGCGGCTGATGGTAACGTCGGCGACATACCGGCAGAGTT CGCACGCGCGGCCGGAGTTGCAGGAGAAGGATCCGGGCAACACGCTACTGGCACGGCAATCGCGATTGCGGCTGCCGGCG GAGCTGATTCGCGACGAGGTTCTGTACGCGGCGGGGCTGTTGGATTTGCGAGTGGGCGGGCGGAGCGTGAAGCCGCCGCA GCCGAAGGGAGTCGCGGAGCTTTCGTACGCGGGGTCGGTGAAGTGGGACGAGAGCAGCGGGCCGGACCGGTACCGTCGCG GACTGTACATTCACTTCCAACGCACGGTGCCGTATCCGCAGCTGATGAACTTCGACGCTCCCTCCGCCAACCTGGCGTGC ACGCGGCGGGAGCGCACGGACACACCGCTGCAGGCACTCAATCTGATGAACGATCCGGTATTCTTCGAGGCGGCGCAAGG GCTGGCATTCCGCATCATGAAGGAGTCCGCGGGCGGATTCGGCGAGCGGCTGCGCTATGCGTACGCGGTGACGCTGGCGC GCGAGCCGAGCGCGCGCGAAGCCGAGCGCATGGGCAAGTACTTCGACGACTCGAGCCGCGATTTGCAGGCACATCCACAG GCGGTGAGCGCGCTGTTTCCGAATCAGTTGGAAGGCATTCCGCAGGCCGAGGCAGCGGCTTGGGTGGAGTTGAGCCGGGT GCTGCTCAACCTGGACGAGTTCATTACGAGGGATTAA
Upstream 100 bases:
>100_bases ATCGAAAAGTGGCATGCAAGCCCGTTGCTGCGGGCCCGTCCGCTTTTGATTTGAAGGCATCGCGTTCAGCCGTGTTCCAG CGGGGAATATAATGTAGGGC
Downstream 100 bases:
>100_bases ATATGGACCGCGAAGAGTTCCTGAAAATCCAATCGCGCCGCAAGTTTTTCCGGGAGTGCGCGGGCGGCATCGGAACGGTG GCGCTGGCACAGTTGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 838; Mature: 838
Protein sequence:
>838_residues MLRTGWLAGALAVCGAAHAAAVDFARDIEPLLTKRCVVCHGAQQQMSGFRLDQRDAALKGGASGVDIVPGKSGESRLIRL VSGLEKKVMPPVGARLTAEEIGLLRAWIDQGATWPATKAPHWSFQKIQRPAAPAVRDRAWARNDIDNFILARLEREGIAP SEEAGKLTLMRRVSLDLTGLPPTPEEVREYLADNRPDAYERLVDRLLDSPHYGEKWARYWLDLARYADSDGYEKDRSRPW AWRYRHWVIDALNRDMPYDEFTTEQLAGDLLPNRNLDTLVATGFNRNTLTNREGGTDPEQFRDEQVLDRAATLGTVWMGL TVGCAQCHNHKFDPISQKEFYQLTAFFNTQEEVNIQAPLAGELGPYLAAKPEYDRKRRALLEEYKIPEALADYESKLRES ALHPGHHEDWDFAYGEFTHTVDNAKKVLFLDPAKRSEVQQNALLDVFLGSCGNLYPKEHCDELKVRDVRAKLNELNAKLP PVSYAPVLLENDTPPVSYIHVKGDWREHGAEVQPGTLAVLPPLPAGAKASRLVLARWLTSPEHPLTSRVAVNRIWQEVFG RGIVGTSEDFGTQGDRPTHPELLDWLASEYMRRGWSTKQMVRLMVTSATYRQSSHARPELQEKDPGNTLLARQSRLRLPA ELIRDEVLYAAGLLDLRVGGRSVKPPQPKGVAELSYAGSVKWDESSGPDRYRRGLYIHFQRTVPYPQLMNFDAPSANLAC TRRERTDTPLQALNLMNDPVFFEAAQGLAFRIMKESAGGFGERLRYAYAVTLAREPSAREAERMGKYFDDSSRDLQAHPQ AVSALFPNQLEGIPQAEAAAWVELSRVLLNLDEFITRD
Sequences:
>Translated_838_residues MLRTGWLAGALAVCGAAHAAAVDFARDIEPLLTKRCVVCHGAQQQMSGFRLDQRDAALKGGASGVDIVPGKSGESRLIRL VSGLEKKVMPPVGARLTAEEIGLLRAWIDQGATWPATKAPHWSFQKIQRPAAPAVRDRAWARNDIDNFILARLEREGIAP SEEAGKLTLMRRVSLDLTGLPPTPEEVREYLADNRPDAYERLVDRLLDSPHYGEKWARYWLDLARYADSDGYEKDRSRPW AWRYRHWVIDALNRDMPYDEFTTEQLAGDLLPNRNLDTLVATGFNRNTLTNREGGTDPEQFRDEQVLDRAATLGTVWMGL TVGCAQCHNHKFDPISQKEFYQLTAFFNTQEEVNIQAPLAGELGPYLAAKPEYDRKRRALLEEYKIPEALADYESKLRES ALHPGHHEDWDFAYGEFTHTVDNAKKVLFLDPAKRSEVQQNALLDVFLGSCGNLYPKEHCDELKVRDVRAKLNELNAKLP PVSYAPVLLENDTPPVSYIHVKGDWREHGAEVQPGTLAVLPPLPAGAKASRLVLARWLTSPEHPLTSRVAVNRIWQEVFG RGIVGTSEDFGTQGDRPTHPELLDWLASEYMRRGWSTKQMVRLMVTSATYRQSSHARPELQEKDPGNTLLARQSRLRLPA ELIRDEVLYAAGLLDLRVGGRSVKPPQPKGVAELSYAGSVKWDESSGPDRYRRGLYIHFQRTVPYPQLMNFDAPSANLAC TRRERTDTPLQALNLMNDPVFFEAAQGLAFRIMKESAGGFGERLRYAYAVTLAREPSAREAERMGKYFDDSSRDLQAHPQ AVSALFPNQLEGIPQAEAAAWVELSRVLLNLDEFITRD >Mature_838_residues MLRTGWLAGALAVCGAAHAAAVDFARDIEPLLTKRCVVCHGAQQQMSGFRLDQRDAALKGGASGVDIVPGKSGESRLIRL VSGLEKKVMPPVGARLTAEEIGLLRAWIDQGATWPATKAPHWSFQKIQRPAAPAVRDRAWARNDIDNFILARLEREGIAP SEEAGKLTLMRRVSLDLTGLPPTPEEVREYLADNRPDAYERLVDRLLDSPHYGEKWARYWLDLARYADSDGYEKDRSRPW AWRYRHWVIDALNRDMPYDEFTTEQLAGDLLPNRNLDTLVATGFNRNTLTNREGGTDPEQFRDEQVLDRAATLGTVWMGL TVGCAQCHNHKFDPISQKEFYQLTAFFNTQEEVNIQAPLAGELGPYLAAKPEYDRKRRALLEEYKIPEALADYESKLRES ALHPGHHEDWDFAYGEFTHTVDNAKKVLFLDPAKRSEVQQNALLDVFLGSCGNLYPKEHCDELKVRDVRAKLNELNAKLP PVSYAPVLLENDTPPVSYIHVKGDWREHGAEVQPGTLAVLPPLPAGAKASRLVLARWLTSPEHPLTSRVAVNRIWQEVFG RGIVGTSEDFGTQGDRPTHPELLDWLASEYMRRGWSTKQMVRLMVTSATYRQSSHARPELQEKDPGNTLLARQSRLRLPA ELIRDEVLYAAGLLDLRVGGRSVKPPQPKGVAELSYAGSVKWDESSGPDRYRRGLYIHFQRTVPYPQLMNFDAPSANLAC TRRERTDTPLQALNLMNDPVFFEAAQGLAFRIMKESAGGFGERLRYAYAVTLAREPSAREAERMGKYFDDSSRDLQAHPQ AVSALFPNQLEGIPQAEAAAWVELSRVLLNLDEFITRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94286; Mature: 94286
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00867 CPSASE_2 ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTGWLAGALAVCGAAHAAAVDFARDIEPLLTKRCVVCHGAQQQMSGFRLDQRDAALKG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHCC GASGVDIVPGKSGESRLIRLVSGLEKKVMPPVGARLTAEEIGLLRAWIDQGATWPATKAP CCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC HWSFQKIQRPAAPAVRDRAWARNDIDNFILARLEREGIAPSEEAGKLTLMRRVSLDLTGL CCCHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCC PPTPEEVREYLADNRPDAYERLVDRLLDSPHYGEKWARYWLDLARYADSDGYEKDRSRPW CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCC AWRYRHWVIDALNRDMPYDEFTTEQLAGDLLPNRNLDTLVATGFNRNTLTNREGGTDPEQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHEECCCCCCCCCCCCCCCCHHH FRDEQVLDRAATLGTVWMGLTVGCAQCHNHKFDPISQKEFYQLTAFFNTQEEVNIQAPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCHHEEEECCCC GELGPYLAAKPEYDRKRRALLEEYKIPEALADYESKLRESALHPGHHEDWDFAYGEFTHT CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH VDNAKKVLFLDPAKRSEVQQNALLDVFLGSCGNLYPKEHCDELKVRDVRAKLNELNAKLP HCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PVSYAPVLLENDTPPVSYIHVKGDWREHGAEVQPGTLAVLPPLPAGAKASRLVLARWLTS CCCCCCEEECCCCCCEEEEEEECCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCC PEHPLTSRVAVNRIWQEVFGRGIVGTSEDFGTQGDRPTHPELLDWLASEYMRRGWSTKQM CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH VRLMVTSATYRQSSHARPELQEKDPGNTLLARQSRLRLPAELIRDEVLYAAGLLDLRVGG HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECC RSVKPPQPKGVAELSYAGSVKWDESSGPDRYRRGLYIHFQRTVPYPQLMNFDAPSANLAC CCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCEEEEEECCCCCHHHHCCCCCCCCEEE TRRERTDTPLQALNLMNDPVFFEAAQGLAFRIMKESAGGFGERLRYAYAVTLAREPSARE CCCCCCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHEEEEECCCCHHH AERMGKYFDDSSRDLQAHPQAVSALFPNQLEGIPQAEAAAWVELSRVLLNLDEFITRD HHHHHHHCCCCCCCHHHCHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLRTGWLAGALAVCGAAHAAAVDFARDIEPLLTKRCVVCHGAQQQMSGFRLDQRDAALKG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHCC GASGVDIVPGKSGESRLIRLVSGLEKKVMPPVGARLTAEEIGLLRAWIDQGATWPATKAP CCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC HWSFQKIQRPAAPAVRDRAWARNDIDNFILARLEREGIAPSEEAGKLTLMRRVSLDLTGL CCCHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCC PPTPEEVREYLADNRPDAYERLVDRLLDSPHYGEKWARYWLDLARYADSDGYEKDRSRPW CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCC AWRYRHWVIDALNRDMPYDEFTTEQLAGDLLPNRNLDTLVATGFNRNTLTNREGGTDPEQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHEECCCCCCCCCCCCCCCCHHH FRDEQVLDRAATLGTVWMGLTVGCAQCHNHKFDPISQKEFYQLTAFFNTQEEVNIQAPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCHHEEEECCCC GELGPYLAAKPEYDRKRRALLEEYKIPEALADYESKLRESALHPGHHEDWDFAYGEFTHT CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH VDNAKKVLFLDPAKRSEVQQNALLDVFLGSCGNLYPKEHCDELKVRDVRAKLNELNAKLP HCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PVSYAPVLLENDTPPVSYIHVKGDWREHGAEVQPGTLAVLPPLPAGAKASRLVLARWLTS CCCCCCEEECCCCCCEEEEEEECCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCC PEHPLTSRVAVNRIWQEVFGRGIVGTSEDFGTQGDRPTHPELLDWLASEYMRRGWSTKQM CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH VRLMVTSATYRQSSHARPELQEKDPGNTLLARQSRLRLPAELIRDEVLYAAGLLDLRVGG HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECC RSVKPPQPKGVAELSYAGSVKWDESSGPDRYRRGLYIHFQRTVPYPQLMNFDAPSANLAC CCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCEEEEEECCCCCHHHHCCCCCCCCEEE TRRERTDTPLQALNLMNDPVFFEAAQGLAFRIMKESAGGFGERLRYAYAVTLAREPSARE CCCCCCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHEEEEECCCCHHH AERMGKYFDDSSRDLQAHPQAVSALFPNQLEGIPQAEAAAWVELSRVLLNLDEFITRD HHHHHHHCCCCCCCHHHCHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA