| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625551
Identifier: 116625551
GI number: 116625551
Start: 8145208
End: 8146017
Strand: Direct
Name: 116625551
Synonym: Acid_6498
Alternate gene names: NA
Gene position: 8145208-8146017 (Clockwise)
Preceding gene: 116625550
Following gene: 116625553
Centisome position: 81.73
GC content: 57.28
Gene sequence:
>810_bases ATGCGAATCATTGCTCTCTTGACTCTAGTCTTGCTGGGACTGGTTCCAGTGTCAGTCGCCACCGTGATTACAAATGGGAC ATTTGGTTTTTCCGGTACGATCGTGGCAACAGGCCCGGGGCTCGTGGTGACCCCGGCGGGTACCTGTCCAGTTGGTGTTA GTTGCGTGTTCTGGCAAGACCCGAGGATGGCCTTCAACAACAAAGTCGATATCAGCGCGGCCGGACTCCCCAACGGAGAC ATCCCACTCGCGATATCGGGACTCGACGCTGGGAATATTTTCAGCCTCTTCTTTCCTCCCGAGGTTGTCGGTTCGACGTT TCCCCCAACTCCATTCATGAGCTTCAACAATGGGGGTGTTACGACCGTGCTCGAAATGAACTTCATCGCGCCTGGCTTTT TCCCCGCCGCAGGGTGCTTTGCGCCGCCCGCCCCGGGCCAGCTTTGCACGCCAGTCGGATCTTTCTTCAACTTTCAGAAC ATTACATCAACCTCGTCCATAGCAACGTGGAGTTTCAGTGGTATCACGAACGATGGCTTGAGCGCTTGGACCGCGAGTTT CGCGTCCCTCTTCAGTACTTCGTACCAGGACGTTCTCGCCAACGTCACGAGCAGCGGATTCGTATCGAACCCATTTGGCG GGACCGGCATCGCCAGTCTGGCGGGGGACGCAGCAGCCCCATCTGCCCTCACCACCATAACCTTGACCCCGATTCCGGAA CCCGCGACTCTGCCTCTCATGGTCGTTACCGGAGTGATGGGCCTGCTCTTGTTTCTGCGCGGTCGTTTGACCGGCGCGAA AACATCGTGA
Upstream 100 bases:
>100_bases TGAATTCCGGGGAGTATACTGCTCAGCGAGCCACTCAAGTTGTAAGTAGGCGTTAGCCGACTCGCGGAGAAACTACATTC CCGACCAGGAGGATTAAACG
Downstream 100 bases:
>100_bases GGACACTTATACCGCTATCCTCGTCCCATCAAAAAACAGCGGCCTTGGCATCACGCCGGCGTTGGGCAATCGTCAGTTCT TCGCCGTCTGGCGGAGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRIIALLTLVLLGLVPVSVATVITNGTFGFSGTIVATGPGLVVTPAGTCPVGVSCVFWQDPRMAFNNKVDISAAGLPNGD IPLAISGLDAGNIFSLFFPPEVVGSTFPPTPFMSFNNGGVTTVLEMNFIAPGFFPAAGCFAPPAPGQLCTPVGSFFNFQN ITSTSSIATWSFSGITNDGLSAWTASFASLFSTSYQDVLANVTSSGFVSNPFGGTGIASLAGDAAAPSALTTITLTPIPE PATLPLMVVTGVMGLLLFLRGRLTGAKTS
Sequences:
>Translated_269_residues MRIIALLTLVLLGLVPVSVATVITNGTFGFSGTIVATGPGLVVTPAGTCPVGVSCVFWQDPRMAFNNKVDISAAGLPNGD IPLAISGLDAGNIFSLFFPPEVVGSTFPPTPFMSFNNGGVTTVLEMNFIAPGFFPAAGCFAPPAPGQLCTPVGSFFNFQN ITSTSSIATWSFSGITNDGLSAWTASFASLFSTSYQDVLANVTSSGFVSNPFGGTGIASLAGDAAAPSALTTITLTPIPE PATLPLMVVTGVMGLLLFLRGRLTGAKTS >Mature_269_residues MRIIALLTLVLLGLVPVSVATVITNGTFGFSGTIVATGPGLVVTPAGTCPVGVSCVFWQDPRMAFNNKVDISAAGLPNGD IPLAISGLDAGNIFSLFFPPEVVGSTFPPTPFMSFNNGGVTTVLEMNFIAPGFFPAAGCFAPPAPGQLCTPVGSFFNFQN ITSTSSIATWSFSGITNDGLSAWTASFASLFSTSYQDVLANVTSSGFVSNPFGGTGIASLAGDAAAPSALTTITLTPIPE PATLPLMVVTGVMGLLLFLRGRLTGAKTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27385; Mature: 27385
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIALLTLVLLGLVPVSVATVITNGTFGFSGTIVATGPGLVVTPAGTCPVGVSCVFWQD CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCCCEEEEECC PRMAFNNKVDISAAGLPNGDIPLAISGLDAGNIFSLFFPPEVVGSTFPPTPFMSFNNGGV CCHHCCCCEEEEECCCCCCCCCEEEECCCCCCEEEEECCHHHHCCCCCCCCCEEECCCCE TTVLEMNFIAPGFFPAAGCFAPPAPGQLCTPVGSFFNFQNITSTSSIATWSFSGITNDGL EEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCH SAWTASFASLFSTSYQDVLANVTSSGFVSNPFGGTGIASLAGDAAAPSALTTITLTPIPE HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCC PATLPLMVVTGVMGLLLFLRGRLTGAKTS CCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRIIALLTLVLLGLVPVSVATVITNGTFGFSGTIVATGPGLVVTPAGTCPVGVSCVFWQD CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCCCEEEEECC PRMAFNNKVDISAAGLPNGDIPLAISGLDAGNIFSLFFPPEVVGSTFPPTPFMSFNNGGV CCHHCCCCEEEEECCCCCCCCCEEEECCCCCCEEEEECCHHHHCCCCCCCCCEEECCCCE TTVLEMNFIAPGFFPAAGCFAPPAPGQLCTPVGSFFNFQNITSTSSIATWSFSGITNDGL EEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCH SAWTASFASLFSTSYQDVLANVTSSGFVSNPFGGTGIASLAGDAAAPSALTTITLTPIPE HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCC PATLPLMVVTGVMGLLLFLRGRLTGAKTS CCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA