| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625527
Identifier: 116625527
GI number: 116625527
Start: 8115821
End: 8116318
Strand: Reverse
Name: 116625527
Synonym: Acid_6474
Alternate gene names: NA
Gene position: 8116318-8115821 (Counterclockwise)
Preceding gene: 116625528
Following gene: 116625525
Centisome position: 81.44
GC content: 56.22
Gene sequence:
>498_bases TTGACCTACGTCATCACCTTTGCCTGCTACGGGTGTCACTTACACGGGACTGATTCCGGTTCTGTCGATCGAACCCAGAA TCTCCCGGGCACCGCCACAATCGAACCCAATTCAAAACGCAGCGAACAGGAGCGAAGCCAAATGGATCAGCCGCCTTATC ACCTCGATCGAGTCCGCAGAGATGCAGTGCTCAAAGCAATCCAGGAAGTCTGCTCCAATCGGTGCTGGAGTCTATTGGCG GCACATGTACGCAGCAACCACGTGCATACCGTGGTCGACGGCGAGATTTCCCCGGAACTGATCATGAATTCCTTCAAGTC TTATGCCAGCCGGCGCTTGAATTGCTTGAGGCTAGATCCACGCGGGCGCAAGCGTTGGGCCCGTCACGGAAGCACACGTT GGTTGTGGAAGCCGCAACACGTCTCGGCAGCCATGCAATACGTCATCGCCGAACAGGGCGATGCAATGTCCGTCCTCGAC GGTGAACACCCAGATTAG
Upstream 100 bases:
>100_bases AAACCCCCTCAGCCCTTGTAGATTATTTTCTTGACAGAGGGGGGCCTTCTCATGGAAGCCGCGACCGTCAGGGAGCGGTC GGTAGTCAGGTATTCCGCCA
Downstream 100 bases:
>100_bases CAACCGCTCCTTGACAGTCGCGGCTCGGATAGAAGTTCTCAGCCGCTACGCGGATTGCGCCGCACCCTTCGCGCGCTCCA CGACGGATTCCACCTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTYVITFACYGCHLHGTDSGSVDRTQNLPGTATIEPNSKRSEQERSQMDQPPYHLDRVRRDAVLKAIQEVCSNRCWSLLA AHVRSNHVHTVVDGEISPELIMNSFKSYASRRLNCLRLDPRGRKRWARHGSTRWLWKPQHVSAAMQYVIAEQGDAMSVLD GEHPD
Sequences:
>Translated_165_residues MTYVITFACYGCHLHGTDSGSVDRTQNLPGTATIEPNSKRSEQERSQMDQPPYHLDRVRRDAVLKAIQEVCSNRCWSLLA AHVRSNHVHTVVDGEISPELIMNSFKSYASRRLNCLRLDPRGRKRWARHGSTRWLWKPQHVSAAMQYVIAEQGDAMSVLD GEHPD >Mature_164_residues TYVITFACYGCHLHGTDSGSVDRTQNLPGTATIEPNSKRSEQERSQMDQPPYHLDRVRRDAVLKAIQEVCSNRCWSLLAA HVRSNHVHTVVDGEISPELIMNSFKSYASRRLNCLRLDPRGRKRWARHGSTRWLWKPQHVSAAMQYVIAEQGDAMSVLDG EHPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18797; Mature: 18666
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYVITFACYGCHLHGTDSGSVDRTQNLPGTATIEPNSKRSEQERSQMDQPPYHLDRVRR CEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCHHHHHHHH DAVLKAIQEVCSNRCWSLLAAHVRSNHVHTVVDGEISPELIMNSFKSYASRRLNCLRLDP HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECC RGRKRWARHGSTRWLWKPQHVSAAMQYVIAEQGDAMSVLDGEHPD CHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCCEEEECCCCCCC >Mature Secondary Structure TYVITFACYGCHLHGTDSGSVDRTQNLPGTATIEPNSKRSEQERSQMDQPPYHLDRVRR EEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCHHHHHHHH DAVLKAIQEVCSNRCWSLLAAHVRSNHVHTVVDGEISPELIMNSFKSYASRRLNCLRLDP HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECC RGRKRWARHGSTRWLWKPQHVSAAMQYVIAEQGDAMSVLDGEHPD CHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA