| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625509
Identifier: 116625509
GI number: 116625509
Start: 8093075
End: 8093410
Strand: Direct
Name: 116625509
Synonym: Acid_6456
Alternate gene names: NA
Gene position: 8093075-8093410 (Clockwise)
Preceding gene: 116625508
Following gene: 116625510
Centisome position: 81.21
GC content: 62.8
Gene sequence:
>336_bases ATGAAGCCGCCGGTGAAGATGCTGGTGATCTATGTGGACGAGACCGACCTATGGGGCACAGTGACGCTGTACGAGGCGAT TGTGCGCAGGCTGCGGCAGCTGGGAATGGCCGGGGCCACGGCGCAATCCGGCATGATGGGCTTCGGCAGTCACGGCAAGG TGCATCGCAAGCGGCTTTTCGGGGTGTCCGACGACCGGCCCGTGATGATCACGGTGGTCGATACCGAGTCCAAGATCCGC GAAGTGGTTCCCGAGATCCGGGGGATGGTAAAGGAAGGGCTTGTCGTCCTGCTGGACGCCGAAGTGGTGGATCCGGCGGA TGAGACAACGGCGTAG
Upstream 100 bases:
>100_bases CGCTGGCGACCGTGGTCGTAGGCGGCCTGCTTTCCACGCTATTGTTGACGTTACTGGTTCTGCCGAGCCTGTACTACCTC ACAGCGAGGAAGGGGGAGCG
Downstream 100 bases:
>100_bases AACGATCGGGGAATTCTTCGGCCAGCTGGGCCCCGGGCTGATCACGGGGGCGGCGGACGATGACCCGTCGGGGATCGCGA CCTACTCGGTGAGCGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MKPPVKMLVIYVDETDLWGTVTLYEAIVRRLRQLGMAGATAQSGMMGFGSHGKVHRKRLFGVSDDRPVMITVVDTESKIR EVVPEIRGMVKEGLVVLLDAEVVDPADETTA
Sequences:
>Translated_111_residues MKPPVKMLVIYVDETDLWGTVTLYEAIVRRLRQLGMAGATAQSGMMGFGSHGKVHRKRLFGVSDDRPVMITVVDTESKIR EVVPEIRGMVKEGLVVLLDAEVVDPADETTA >Mature_111_residues MKPPVKMLVIYVDETDLWGTVTLYEAIVRRLRQLGMAGATAQSGMMGFGSHGKVHRKRLFGVSDDRPVMITVVDTESKIR EVVPEIRGMVKEGLVVLLDAEVVDPADETTA
Specific function: Unknown
COG id: COG1993
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0166 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003793 - InterPro: IPR011322 - InterPro: IPR015867 [H]
Pfam domain/function: PF02641 DUF190 [H]
EC number: NA
Molecular weight: Translated: 12227; Mature: 12227
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPPVKMLVIYVDETDLWGTVTLYEAIVRRLRQLGMAGATAQSGMMGFGSHGKVHRKRLF CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC GVSDDRPVMITVVDTESKIREVVPEIRGMVKEGLVVLLDAEVVDPADETTA CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure MKPPVKMLVIYVDETDLWGTVTLYEAIVRRLRQLGMAGATAQSGMMGFGSHGKVHRKRLF CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC GVSDDRPVMITVVDTESKIREVVPEIRGMVKEGLVVLLDAEVVDPADETTA CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]