| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625494
Identifier: 116625494
GI number: 116625494
Start: 8070893
End: 8071867
Strand: Reverse
Name: 116625494
Synonym: Acid_6441
Alternate gene names: NA
Gene position: 8071867-8070893 (Counterclockwise)
Preceding gene: 116625495
Following gene: 116625492
Centisome position: 81.0
GC content: 64.62
Gene sequence:
>975_bases ATGCTGCGCGCATTGATCGTCCTGGTTCTGATTGCTGGAGCGGTATTGTTCACTCTGCCGTTCCTGGTCTCCTCGCTCTA CGTCGATCAACGCGGCATAACGATTCCGGGCAAGGTGCATTCGAAGCGCGAAGACGTCACGGTCCACAATTCCACGTGGC AGCGATCCTGCGAGATGACGGTGGAGTACTCTCCGCCGGATACCTCCAGTGTCGCCTTCCTCGCCGTTCAACTTCCGCCT GACCGGTACGATGAATTCCGCAAGGGACTGGCGGTGACCCTGCACTACCTCCCTCGAAAGGATGTCCCCCACCTGCCGCT GGCGCATATCCTCAGCGAGGTCCACGCGCTGACCACGGCGCGCATCGCCGGCCAGACGGCGTTTTCCAACTGGGAGGACT TCTTCACGCGGGACACGCTGGTGGTCTGCGCTCTGCTATGCGCAGCCGTGGTGGTGTTACTCGTGTGGCGGCTCTCGCGC TTGCCGGGCTTCGCGTGGGCGGTCTGCGGGTGTGTGATCGTGGGCCTGGTCGCGATGGCGATCAGCGATTTTCCCACCAC GGTTCCAGGACCCTTGGTGGACGTCCGCAGCGGGTCCGGCAAAGTGAAGAGCGTGGACCGCATCGATCGCCTCTTCCAGG GCAAGCGTTCGCGCGGTTTCGATGCGGACCAGCCGGTGGCCGTCGTCGGCGTGGAGTTCCTCCCGGCCGGCCGCACCGAG CCCGTACTGGGCGTAGACCTGATCGACGCCGGCTCGATCGCTGGCCTGAAGCCGGGGGCGACGGTGGCTGTGGACTACGA GGCCGCCTCCCCTCGAACCGCGCACATTCGAAACGCCACCCGAAGCTTCCCCTGGCGCAACGTCAGGGGAATCGCCGTCG AAAGCGTCTTGAGCCTCCTGCTCCTGGTCGGCGCGTTCGCAGCATGGGAGTATCTCGGGCGAGCGTGGAGCCGGAAAATG GGTAGCCGAGCGTAA
Upstream 100 bases:
>100_bases CGAGCACGGCAAAAAAATCTGCCGCGATAAGAGCCCGGCCTGCCACGAATGTCCGCTCGAGGATACCTGCGCCTTCCGTC ATCCCGGGATCGCGAATTGA
Downstream 100 bases:
>100_bases AAGGCGGTTAGCGAACGAAGTTCAACCCGAACTCCCGGGCGGCTTCGGCCAGCCGTTTATCCAGCGTCCAAAACGTGCAA TGTGAGAGTAGCGCGGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MLRALIVLVLIAGAVLFTLPFLVSSLYVDQRGITIPGKVHSKREDVTVHNSTWQRSCEMTVEYSPPDTSSVAFLAVQLPP DRYDEFRKGLAVTLHYLPRKDVPHLPLAHILSEVHALTTARIAGQTAFSNWEDFFTRDTLVVCALLCAAVVVLLVWRLSR LPGFAWAVCGCVIVGLVAMAISDFPTTVPGPLVDVRSGSGKVKSVDRIDRLFQGKRSRGFDADQPVAVVGVEFLPAGRTE PVLGVDLIDAGSIAGLKPGATVAVDYEAASPRTAHIRNATRSFPWRNVRGIAVESVLSLLLLVGAFAAWEYLGRAWSRKM GSRA
Sequences:
>Translated_324_residues MLRALIVLVLIAGAVLFTLPFLVSSLYVDQRGITIPGKVHSKREDVTVHNSTWQRSCEMTVEYSPPDTSSVAFLAVQLPP DRYDEFRKGLAVTLHYLPRKDVPHLPLAHILSEVHALTTARIAGQTAFSNWEDFFTRDTLVVCALLCAAVVVLLVWRLSR LPGFAWAVCGCVIVGLVAMAISDFPTTVPGPLVDVRSGSGKVKSVDRIDRLFQGKRSRGFDADQPVAVVGVEFLPAGRTE PVLGVDLIDAGSIAGLKPGATVAVDYEAASPRTAHIRNATRSFPWRNVRGIAVESVLSLLLLVGAFAAWEYLGRAWSRKM GSRA >Mature_324_residues MLRALIVLVLIAGAVLFTLPFLVSSLYVDQRGITIPGKVHSKREDVTVHNSTWQRSCEMTVEYSPPDTSSVAFLAVQLPP DRYDEFRKGLAVTLHYLPRKDVPHLPLAHILSEVHALTTARIAGQTAFSNWEDFFTRDTLVVCALLCAAVVVLLVWRLSR LPGFAWAVCGCVIVGLVAMAISDFPTTVPGPLVDVRSGSGKVKSVDRIDRLFQGKRSRGFDADQPVAVVGVEFLPAGRTE PVLGVDLIDAGSIAGLKPGATVAVDYEAASPRTAHIRNATRSFPWRNVRGIAVESVLSLLLLVGAFAAWEYLGRAWSRKM GSRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35212; Mature: 35212
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRALIVLVLIAGAVLFTLPFLVSSLYVDQRGITIPGKVHSKREDVTVHNSTWQRSCEMT CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHCCCCEE VEYSPPDTSSVAFLAVQLPPDRYDEFRKGLAVTLHYLPRKDVPHLPLAHILSEVHALTTA EEECCCCCCCEEEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH RIAGQTAFSNWEDFFTRDTLVVCALLCAAVVVLLVWRLSRLPGFAWAVCGCVIVGLVAMA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ISDFPTTVPGPLVDVRSGSGKVKSVDRIDRLFQGKRSRGFDADQPVAVVGVEFLPAGRTE HHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCC PVLGVDLIDAGSIAGLKPGATVAVDYEAASPRTAHIRNATRSFPWRNVRGIAVESVLSLL CEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH LLVGAFAAWEYLGRAWSRKMGSRA HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLRALIVLVLIAGAVLFTLPFLVSSLYVDQRGITIPGKVHSKREDVTVHNSTWQRSCEMT CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHCCCCEE VEYSPPDTSSVAFLAVQLPPDRYDEFRKGLAVTLHYLPRKDVPHLPLAHILSEVHALTTA EEECCCCCCCEEEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH RIAGQTAFSNWEDFFTRDTLVVCALLCAAVVVLLVWRLSRLPGFAWAVCGCVIVGLVAMA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ISDFPTTVPGPLVDVRSGSGKVKSVDRIDRLFQGKRSRGFDADQPVAVVGVEFLPAGRTE HHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCC PVLGVDLIDAGSIAGLKPGATVAVDYEAASPRTAHIRNATRSFPWRNVRGIAVESVLSLL CEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH LLVGAFAAWEYLGRAWSRKMGSRA HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA