Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116625492

Identifier: 116625492

GI number: 116625492

Start: 8064500

End: 8066764

Strand: Reverse

Name: 116625492

Synonym: Acid_6438

Alternate gene names: NA

Gene position: 8066764-8064500 (Counterclockwise)

Preceding gene: 116625494

Following gene: 116625491

Centisome position: 80.95

GC content: 62.43

Gene sequence:

>2265_bases
GTGGACTTCATGTTCGAATTCCTGTTCAAATATCCGGCTAACATCTTCCATAAGGGCCAGTTCGTCCTCCTGACGCCGTG
GCCTGTTTGGGTGTTGGCGTTCGCCATTCTCATCGCCGCCGGCGCCCTCTTCTGGCACGTCCGGCGCAATCACGGAATGC
TCAGCGGGGCTCGGCCAATCGCCATCTGGCTGCTGGAAAGCGGCCTCATTGCGCTGATTCTCTTCCTCCTATGGCACCCG
GCCTTGAGCATCGCCACCCTCAAGCCCCAACAGAACGTGGTGGCCGTCCTGGTGGACGATTCGCGCAGCATGGCGATCAA
CGACAACTCGGGAACCCGCGAAGCGGCCGCGCAGGCGGCGCTCAACTCCGGACTGCTCAAGGGCCTCACCGACAAGTTTC
AAGTCAGACTTTACAAGTTCGGCAAAGACCCCGAGCGCATCCAGAAAGCCGATCAACTGACGGCCGCGGCGCCGGCCACC
CGCATCGGCGATACCCTGGAACGCGTCCTTGCGGAAAGCTCGAGCCTGCCCCTGGGCGCGATCGTGCTCTTGAGCGACGG
CGCGGATAACGCGGGCGGCATCGATCTCGCGACCATCGCGGCCATCCGGCGGCAGCGCATTCCCATCCACACTGTGGGCT
TCGGCAAGGAGCACCCGGACCGCGACATCGAAATCACCGACGCCGTGACCCCCGCGAGGGCGCTCCCCGATTCCAAGCTG
ACCGCGACCGTGACCCTGCAAAGCTGGGGACTCTCCGGCAGCAAAGCGAAGTTGAACGTCAAGGAGAGCGGCAAGGTCCT
TACGTCGCAGGAAATCGTATTAAAGGATAGCGGGCAGTTGCAGTCGGAGACCCTGGTCTTTAACGGCGGCCAGGCGGGTC
CCAAGACCTTCGAGATCTCGGTGGACCCGGTCCAGGGCGAAGAAAATCAGCTGAACAACAAGATCACGCGCGTCGTCAAC
GTGGAAAAACGCCGTCCGCGCATCCTCTATATACAGGGTGAGCCGGTATGGGAATTCAAGTTCATCCGCCGCGCGATCGA
TGACTACCCCGATATCGGCATCGACCTGCCCACCATGCTGCGCACCACCCAGAACAAGATCTACCGGCAGGGCGGCAGCA
GTCCCAAGGAACTCGAGGACGGCTTCCCCACCAAGCCCGAGGAACTGTTTGCCTACCAGGGCCTGATCATCGGCGGCGTG
GAGGCCAGCTATTTCACCCCCGCGCAGCAACAAGCCATCAAGGACTTTGTGGACCGGCGCGGCGGCGGCGTTCTGTTCAT
CGCCGGGCGCGCGAGCTTGAGCGATGGCGGCTGGCAGAATTCGCCGATGGCCGACCTGATCCCGGTCAAGCTGCCCGATT
CGCGCGGCACCTTTCATCGCGATTTCTCCAGCGTGACGTTGACGCCGCAGGGCGCTCAGAGCATCCTCTGCCGGCTGGAT
GAGAATCCGGCGCGCAACCTGGAGCGCTGGAAAAAGATCCCGCAGATCGCCAACTATCAGGATGTGGGCGACCCCAAGCC
CGGAGCCACCACGCTGCTTCAAGTGACCACCCCCGCCAAGCGGGTGCAGCCCCTGCTGGTGACCGAGAACTTCGGCCGCG
GCCGCACCGTGCTCTTCGCGACCGAGGGCAGTTGGCGCTGGAAGATGTGGCTGGACCACGCCGACAAAACACACCCCACC
TTCTGGCAGCAGATGTTCCGCCAGTTGGTTGCGGATTCGCCCGGCCAGGTGCTGGCGTCCACGCCGAAATCCGTGCTGAG
CGACGATACCAAGGTGCCCATCCGCGTCGAAGTCCGCGACAAGCAATATAAACCCGTGACCAACGCCAAAGTGCAGGCGC
GCTTCCTCGAACCCGATGGAACCAGCGCGACGATGGAACTAAATCCCGTTCCGATGGAAGAAGGTATATACGGCGGGGAA
TGGACGGCGGAGAAGCCGGGCTCGTACGTGGTCGATATTTTGGCCGGACATGACCAGGAAGAGACCGGGCATGACCTGCT
GACCTTCCGCCGCGAGGACGGGGTGGCGGAAAACTTCCACACATCGCAGAATAAGGAACTGCTCCAGAAGCTCAGCGAAC
AGACCGGCGGACGGTACTACAAGGGCAGTGAGGCGTCCAAGCTATCGAATGAAATTTCCTACTCCGAGGCCGGCATCACC
ACCCGCGAGACCCGCGACCTTTGGGATATGCCGGTCGTCTTCCTCCTCGCCCTCGGCATCCGCGCCTCCGAATGGCTGCT
GCGCCGGAAGTGGGGCGTAGTATGA

Upstream 100 bases:

>100_bases
GAGGGCCGCGCGCCTGTGGAACTTCCCGCCAATTTACAGCTGTCTGTAACGCCAACCTGCACCTGGCACGTCCCTATACC
TATCGTGATCTGTCTCTGAC

Downstream 100 bases:

>100_bases
AGACGCTCGTCCTTCTCGCGCTCTCCGCCCTTTCCGCTCCCGCCGCCACCTTCTACCTCAACATGGCCGGCATCGGTGGT
GAGACGGATTACACTCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide; En/Spm-Like Transposon Protein

Number of amino acids: Translated: 754; Mature: 754

Protein sequence:

>754_residues
MDFMFEFLFKYPANIFHKGQFVLLTPWPVWVLAFAILIAAGALFWHVRRNHGMLSGARPIAIWLLESGLIALILFLLWHP
ALSIATLKPQQNVVAVLVDDSRSMAINDNSGTREAAAQAALNSGLLKGLTDKFQVRLYKFGKDPERIQKADQLTAAAPAT
RIGDTLERVLAESSSLPLGAIVLLSDGADNAGGIDLATIAAIRRQRIPIHTVGFGKEHPDRDIEITDAVTPARALPDSKL
TATVTLQSWGLSGSKAKLNVKESGKVLTSQEIVLKDSGQLQSETLVFNGGQAGPKTFEISVDPVQGEENQLNNKITRVVN
VEKRRPRILYIQGEPVWEFKFIRRAIDDYPDIGIDLPTMLRTTQNKIYRQGGSSPKELEDGFPTKPEELFAYQGLIIGGV
EASYFTPAQQQAIKDFVDRRGGGVLFIAGRASLSDGGWQNSPMADLIPVKLPDSRGTFHRDFSSVTLTPQGAQSILCRLD
ENPARNLERWKKIPQIANYQDVGDPKPGATTLLQVTTPAKRVQPLLVTENFGRGRTVLFATEGSWRWKMWLDHADKTHPT
FWQQMFRQLVADSPGQVLASTPKSVLSDDTKVPIRVEVRDKQYKPVTNAKVQARFLEPDGTSATMELNPVPMEEGIYGGE
WTAEKPGSYVVDILAGHDQEETGHDLLTFRREDGVAENFHTSQNKELLQKLSEQTGGRYYKGSEASKLSNEISYSEAGIT
TRETRDLWDMPVVFLLALGIRASEWLLRRKWGVV

Sequences:

>Translated_754_residues
MDFMFEFLFKYPANIFHKGQFVLLTPWPVWVLAFAILIAAGALFWHVRRNHGMLSGARPIAIWLLESGLIALILFLLWHP
ALSIATLKPQQNVVAVLVDDSRSMAINDNSGTREAAAQAALNSGLLKGLTDKFQVRLYKFGKDPERIQKADQLTAAAPAT
RIGDTLERVLAESSSLPLGAIVLLSDGADNAGGIDLATIAAIRRQRIPIHTVGFGKEHPDRDIEITDAVTPARALPDSKL
TATVTLQSWGLSGSKAKLNVKESGKVLTSQEIVLKDSGQLQSETLVFNGGQAGPKTFEISVDPVQGEENQLNNKITRVVN
VEKRRPRILYIQGEPVWEFKFIRRAIDDYPDIGIDLPTMLRTTQNKIYRQGGSSPKELEDGFPTKPEELFAYQGLIIGGV
EASYFTPAQQQAIKDFVDRRGGGVLFIAGRASLSDGGWQNSPMADLIPVKLPDSRGTFHRDFSSVTLTPQGAQSILCRLD
ENPARNLERWKKIPQIANYQDVGDPKPGATTLLQVTTPAKRVQPLLVTENFGRGRTVLFATEGSWRWKMWLDHADKTHPT
FWQQMFRQLVADSPGQVLASTPKSVLSDDTKVPIRVEVRDKQYKPVTNAKVQARFLEPDGTSATMELNPVPMEEGIYGGE
WTAEKPGSYVVDILAGHDQEETGHDLLTFRREDGVAENFHTSQNKELLQKLSEQTGGRYYKGSEASKLSNEISYSEAGIT
TRETRDLWDMPVVFLLALGIRASEWLLRRKWGVV
>Mature_754_residues
MDFMFEFLFKYPANIFHKGQFVLLTPWPVWVLAFAILIAAGALFWHVRRNHGMLSGARPIAIWLLESGLIALILFLLWHP
ALSIATLKPQQNVVAVLVDDSRSMAINDNSGTREAAAQAALNSGLLKGLTDKFQVRLYKFGKDPERIQKADQLTAAAPAT
RIGDTLERVLAESSSLPLGAIVLLSDGADNAGGIDLATIAAIRRQRIPIHTVGFGKEHPDRDIEITDAVTPARALPDSKL
TATVTLQSWGLSGSKAKLNVKESGKVLTSQEIVLKDSGQLQSETLVFNGGQAGPKTFEISVDPVQGEENQLNNKITRVVN
VEKRRPRILYIQGEPVWEFKFIRRAIDDYPDIGIDLPTMLRTTQNKIYRQGGSSPKELEDGFPTKPEELFAYQGLIIGGV
EASYFTPAQQQAIKDFVDRRGGGVLFIAGRASLSDGGWQNSPMADLIPVKLPDSRGTFHRDFSSVTLTPQGAQSILCRLD
ENPARNLERWKKIPQIANYQDVGDPKPGATTLLQVTTPAKRVQPLLVTENFGRGRTVLFATEGSWRWKMWLDHADKTHPT
FWQQMFRQLVADSPGQVLASTPKSVLSDDTKVPIRVEVRDKQYKPVTNAKVQARFLEPDGTSATMELNPVPMEEGIYGGE
WTAEKPGSYVVDILAGHDQEETGHDLLTFRREDGVAENFHTSQNKELLQKLSEQTGGRYYKGSEASKLSNEISYSEAGIT
TRETRDLWDMPVVFLLALGIRASEWLLRRKWGVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83641; Mature: 83641

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFMFEFLFKYPANIFHKGQFVLLTPWPVWVLAFAILIAAGALFWHVRRNHGMLSGARPI
CCHHHHHHHHCCHHHEECCCEEEECCCHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCE
AIWLLESGLIALILFLLWHPALSIATLKPQQNVVAVLVDDSRSMAINDNSGTREAAAQAA
EEEEECCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHHHH
LNSGLLKGLTDKFQVRLYKFGKDPERIQKADQLTAAAPATRIGDTLERVLAESSSLPLGA
HHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEE
IVLLSDGADNAGGIDLATIAAIRRQRIPIHTVGFGKEHPDRDIEITDAVTPARALPDSKL
EEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCHHCCCCCCE
TATVTLQSWGLSGSKAKLNVKESGKVLTSQEIVLKDSGQLQSETLVFNGGQAGPKTFEIS
EEEEEEEECCCCCCCEEEEECCCCCEEECCEEEEECCCCCCCCEEEEECCCCCCEEEEEE
VDPVQGEENQLNNKITRVVNVEKRRPRILYIQGEPVWEFKFIRRAIDDYPDIGIDLPTML
ECCCCCCHHHHHHHHHHEEEHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHH
RTTQNKIYRQGGSSPKELEDGFPTKPEELFAYQGLIIGGVEASYFTPAQQQAIKDFVDRR
HHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCC
GGGVLFIAGRASLSDGGWQNSPMADLIPVKLPDSRGTFHRDFSSVTLTPQGAQSILCRLD
CCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHCCC
ENPARNLERWKKIPQIANYQDVGDPKPGATTLLQVTTPAKRVQPLLVTENFGRGRTVLFA
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCHHHCCEEEEEECCCCCCEEEEE
TEGSWRWKMWLDHADKTHPTFWQQMFRQLVADSPGQVLASTPKSVLSDDTKVPIRVEVRD
ECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCCHHHHCCCCCCEEEEEECC
KQYKPVTNAKVQARFLEPDGTSATMELNPVPMEEGIYGGEWTAEKPGSYVVDILAGHDQE
CCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCEEEEEEECCCCC
ETGHDLLTFRREDGVAENFHTSQNKELLQKLSEQTGGRYYKGSEASKLSNEISYSEAGIT
CCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHCCHHHCCCC
TRETRDLWDMPVVFLLALGIRASEWLLRRKWGVV
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MDFMFEFLFKYPANIFHKGQFVLLTPWPVWVLAFAILIAAGALFWHVRRNHGMLSGARPI
CCHHHHHHHHCCHHHEECCCEEEECCCHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCE
AIWLLESGLIALILFLLWHPALSIATLKPQQNVVAVLVDDSRSMAINDNSGTREAAAQAA
EEEEECCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHHHH
LNSGLLKGLTDKFQVRLYKFGKDPERIQKADQLTAAAPATRIGDTLERVLAESSSLPLGA
HHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEE
IVLLSDGADNAGGIDLATIAAIRRQRIPIHTVGFGKEHPDRDIEITDAVTPARALPDSKL
EEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCHHCCCCCCE
TATVTLQSWGLSGSKAKLNVKESGKVLTSQEIVLKDSGQLQSETLVFNGGQAGPKTFEIS
EEEEEEEECCCCCCCEEEEECCCCCEEECCEEEEECCCCCCCCEEEEECCCCCCEEEEEE
VDPVQGEENQLNNKITRVVNVEKRRPRILYIQGEPVWEFKFIRRAIDDYPDIGIDLPTML
ECCCCCCHHHHHHHHHHEEEHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHH
RTTQNKIYRQGGSSPKELEDGFPTKPEELFAYQGLIIGGVEASYFTPAQQQAIKDFVDRR
HHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCC
GGGVLFIAGRASLSDGGWQNSPMADLIPVKLPDSRGTFHRDFSSVTLTPQGAQSILCRLD
CCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHCCC
ENPARNLERWKKIPQIANYQDVGDPKPGATTLLQVTTPAKRVQPLLVTENFGRGRTVLFA
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCHHHCCEEEEEECCCCCCEEEEE
TEGSWRWKMWLDHADKTHPTFWQQMFRQLVADSPGQVLASTPKSVLSDDTKVPIRVEVRD
ECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCCHHHHCCCCCCEEEEEECC
KQYKPVTNAKVQARFLEPDGTSATMELNPVPMEEGIYGGEWTAEKPGSYVVDILAGHDQE
CCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCEEEEEEECCCCC
ETGHDLLTFRREDGVAENFHTSQNKELLQKLSEQTGGRYYKGSEASKLSNEISYSEAGIT
CCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHCCHHHCCCC
TRETRDLWDMPVVFLLALGIRASEWLLRRKWGVV
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA