| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625445
Identifier: 116625445
GI number: 116625445
Start: 8008344
End: 8009174
Strand: Reverse
Name: 116625445
Synonym: Acid_6390
Alternate gene names: NA
Gene position: 8009174-8008344 (Counterclockwise)
Preceding gene: 116625446
Following gene: 116625444
Centisome position: 80.37
GC content: 58.48
Gene sequence:
>831_bases ATGCCTCGAATCCTCCACTACGACCCGCAACGAAACGTGCTGGTGACCGAACTCCTTCCTTCCCTATCCCTCGGAGGACG GGTTCTTAATTCAGTGCACAACCTGCTGCCGGAACAGGTTGCATCCGCCGGAGAAACGCTGGCAAGGGTGCATTTGAGCA TCGCCCCTCCGGCAAGTGTGGAAAGCCAGTTCCCGCTTGGAATCGCGCTCTACAAGCCCGGTCTCGAACTCTACCGGAAC TCGAGCCGCAGAAATATACAGCTGCTTGCGGCCTTACAAAGCGACGAAACTCTGTGCCAACACCTGATGACCCTGGACCG CTCGTGGCAGCGCTCCAACTTCATCCACGGCGACGTAAAGCTCGACAACATAGTCCAAAGTGAGCGCGATGGACGACGAA TCTCCGTGCTGGTCGATTGGGAGTTTGCCGGGTCGGGGGATATCCGCTGGGACGTTGGTTCGGTTGCCGGCGAGATTCTC TATATGTGGATTGTCGATGTCGTACGCCGAGAGCTGGGCTCCGCCTCCCCACCGGAGAGCGACCACCGAGGCACGCAGGC ATTGGAGCAGGTGCGGCTCCTGATCGCTGCCTTCTTCAAAAGCTATTGCGACGCAGCGGGGAAACCTTTCGATGCGATAT TTATCGGGGAATGCTTCGGTTTCGCCGCGGCCCGCTTGCTTCAGACCACGTATGAGGCCGGGCAGTATCGCAGCGAGCTC GATCTCTTTGCGGTGAAGACGCTTCAGATGGCGGCAAACATCGCGGCCAATTGCGATGGATGCGTGCGCGTCTTTCTTGA CCCCGGAAAAGACCCCGGAAAACCGGTATGA
Upstream 100 bases:
>100_bases CAAGCAAGCGGGAACTCCGGCGTCCCAAATCACTCTTAGAAACGAAGCGCAGGCCTTGGGGTCACGGTCGGCAACCTGCC GCGAGGGTCCCGATCCCTAC
Downstream 100 bases:
>100_bases GCTCACCTTCGCCCGCCAACTCAGCCGGCGCACTCGAATCGCTGGTCCGACGCCTTCGCGTCTTCCCCGACCTGACGGGC TTCGAGTGGTTTGGGGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MPRILHYDPQRNVLVTELLPSLSLGGRVLNSVHNLLPEQVASAGETLARVHLSIAPPASVESQFPLGIALYKPGLELYRN SSRRNIQLLAALQSDETLCQHLMTLDRSWQRSNFIHGDVKLDNIVQSERDGRRISVLVDWEFAGSGDIRWDVGSVAGEIL YMWIVDVVRRELGSASPPESDHRGTQALEQVRLLIAAFFKSYCDAAGKPFDAIFIGECFGFAAARLLQTTYEAGQYRSEL DLFAVKTLQMAANIAANCDGCVRVFLDPGKDPGKPV
Sequences:
>Translated_276_residues MPRILHYDPQRNVLVTELLPSLSLGGRVLNSVHNLLPEQVASAGETLARVHLSIAPPASVESQFPLGIALYKPGLELYRN SSRRNIQLLAALQSDETLCQHLMTLDRSWQRSNFIHGDVKLDNIVQSERDGRRISVLVDWEFAGSGDIRWDVGSVAGEIL YMWIVDVVRRELGSASPPESDHRGTQALEQVRLLIAAFFKSYCDAAGKPFDAIFIGECFGFAAARLLQTTYEAGQYRSEL DLFAVKTLQMAANIAANCDGCVRVFLDPGKDPGKPV >Mature_275_residues PRILHYDPQRNVLVTELLPSLSLGGRVLNSVHNLLPEQVASAGETLARVHLSIAPPASVESQFPLGIALYKPGLELYRNS SRRNIQLLAALQSDETLCQHLMTLDRSWQRSNFIHGDVKLDNIVQSERDGRRISVLVDWEFAGSGDIRWDVGSVAGEILY MWIVDVVRRELGSASPPESDHRGTQALEQVRLLIAAFFKSYCDAAGKPFDAIFIGECFGFAAARLLQTTYEAGQYRSELD LFAVKTLQMAANIAANCDGCVRVFLDPGKDPGKPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30494; Mature: 30363
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRILHYDPQRNVLVTELLPSLSLGGRVLNSVHNLLPEQVASAGETLARVHLSIAPPASV CCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC ESQFPLGIALYKPGLELYRNSSRRNIQLLAALQSDETLCQHLMTLDRSWQRSNFIHGDVK CCCCCCEEEEECCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHCCCEECCEE LDNIVQSERDGRRISVLVDWEFAGSGDIRWDVGSVAGEILYMWIVDVVRRELGSASPPES HHHHHHCCCCCCEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DHRGTQALEQVRLLIAAFFKSYCDAAGKPFDAIFIGECFGFAAARLLQTTYEAGQYRSEL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH DLFAVKTLQMAANIAANCDGCVRVFLDPGKDPGKPV HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure PRILHYDPQRNVLVTELLPSLSLGGRVLNSVHNLLPEQVASAGETLARVHLSIAPPASV CCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC ESQFPLGIALYKPGLELYRNSSRRNIQLLAALQSDETLCQHLMTLDRSWQRSNFIHGDVK CCCCCCEEEEECCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHCCCEECCEE LDNIVQSERDGRRISVLVDWEFAGSGDIRWDVGSVAGEILYMWIVDVVRRELGSASPPES HHHHHHCCCCCCEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DHRGTQALEQVRLLIAAFFKSYCDAAGKPFDAIFIGECFGFAAARLLQTTYEAGQYRSEL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH DLFAVKTLQMAANIAANCDGCVRVFLDPGKDPGKPV HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA