| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625444
Identifier: 116625444
GI number: 116625444
Start: 8005981
End: 8008347
Strand: Reverse
Name: 116625444
Synonym: Acid_6389
Alternate gene names: NA
Gene position: 8008347-8005981 (Counterclockwise)
Preceding gene: 116625445
Following gene: 116625442
Centisome position: 80.36
GC content: 61.81
Gene sequence:
>2367_bases ATGAGCTCACCTTCGCCCGCCAACTCAGCCGGCGCACTCGAATCGCTGGTCCGACGCCTTCGCGTCTTCCCCGACCTGAC GGGCTTCGAGTGGTTTGGGGTTCCGCAAGCAATCACCTCGTCTCCAACGCCTGGCGCCAGCGAAACCCGCAAACTCCTGC GGGATGCCGTGACTACCTGTTTGTACGAAAACTTCTATTGCACCGGAATAGCAATGCCGCACAGGGACCGCTCCCTGCGG GAGCGGTCCAACCGGTATAGCCGCTTTGTCCAATCGGTTTTGAACGCCAATAGCACTCGGGTTGCCTGGAGTCCAACGAA AGTGCTGCGCGTCACGGAGTCCGCCGTTGTCACTTCGCTGGGAGATGTTTCGATTTATACCGATCGTACGTCACGCCTCC TTAACACGCTTGACGGCCGGCCGATTCCCCCCGATGCCGCAAGCCCATTTCCTTCTGCTGTGAAGGTGGGCGCCCGCAGT TGGACTCTGAGCGCATCGCCAGGGTTCATCCTGATGATCGGCCGGCTCGAACTGACTGGAGGTCAGGGGGCGTTCCATCG CGTGTACTGGAATTTGAATCCCACGGGTGCGGCGGAGTTCGTGGCAGCGGCCACCCACAACCTCAATCGGTTGCGCATCC CGTTCCGGTTGAAGCTGCTCGCCGAACCCCGCCACTACGACCTCCGGCTCGACCGCGCCATTGTGTACGTGAATCTGCGA GCCGCGAAAGCCCGGGAGGCGCTCGCTGAGACTTACCGCCAGATTAGCCATCACCTTTCCGAAGGCGTTCCCGCAATGAC GTGCACGATTGCGCCGGGATTGGCCGTGGCTGAGGATCCCGGCGATGGCACGAGCTTTGGCATGCACCGCTGCCGACTCA TTGCGGAAGGGTTCGTGCGGTCCGCGGAGAACGCGCTCACCGCGCCGACCGACGTGCTCGCGCAGGTTGAGCGGGTATTT GCGCATAACGGAATTAACCTCGACCGGCCGCACCACCGCCGTGAAATCGACGATGCTTATACGGTCGATTTTGCGCGTCT GCTCGACCGAACGCCAAGTCCGAAGTCCATCCAAGCAGACGCGGCGCCGGATGTTCCGCCAGAGGTATCATGGCTTTCAA TCGCGGACACAATCGGGCGGCAAGTGGCTGCGGACGCGTTTTGGAGCGGGGATCGGTGCCAATGGATGGGCGGCGAGATG GACCGTTCCAACCAGGTCGTCTTTCGTACTCTCTCTGGAAACCTTTACGGCGGAGTGGCAGGTATCGGCCATTTTCTCGC CGAACTGGCCTACCGAACGCAGAGGGACGAATTGGCTGCAACTGCGCTTGGCGCCATGAGGCAGGCCCTTGTCACGGCGG AACCGGATGGGCCTGGCGGGCTTTATGATGGCACGCTCGGAACAGTCCTGACTGCAACCCGGGCAGCCCGCGCTCTGGGA GATTCGAAGCTCCTGGAACAGGCCTCGGCCATGGCGCGTCGCCTCGCGGCACGAACTCCTGAACGAGGTCCGGACCTGCT GAACGGACTTGCAGGGCAGATCGTAGGTTTTCTGATATTGGCGGATCTTGTTCCGGACCACGGCTTCAGATGCAGGGCGA TTGAGGTCGGCGGACTTCTCGTCGAGAGTGCGGAGTATGCTGACACAGGATGCTCCTGGTCAAACCCGCTGATCGAATCG ACGGCGAACTTGACGGGACTCTCCCACGGCACCACCGGCATAGCGGTCGCGCTGGCAGAATTGTGGCGAAGCACCGGAGA CCGGGCGTTCTTCGATGCCGCCGCCGGAGCGATCGCGTACGAGGATGCGGCCTTCAGCGAAAAGCACTCGAATTGGCCCG ACTATCGGCTGTCCCGGGATGGGACGAAGCACCTCAGATACACAAACTTCTGGTGTCATGGGGCACCCGGGATAATACTC GGCCGCCTCCGCCTGAGCCAGTTGATGGGGCTGAGAGAACCTCCACCTCATCTGGCAATCGCGATGGAGTCATTCCGCCG CGCCGTCGAGATAAACGCGCATCGACGGGGCGTCAATTTCAGCCTCTGTCATGGCGTGGCCGGGAACACAGAAATTTTGC GGGAGACATCCCGATTCGAACCGGCCGGAGCGGCCTGGCAGCAGCGTGCCGCCGAGACTGCCGACGCGTGCTGGCGCGCC GGTGCTGGCTTCTATACAACCTCGCGAGTGTGGCCATGTGGAGACATCGGCGACAACCCGTCTATGATGCTCGGCCGGTC GGGAATAGGCTACGCCTATTTGCGCCTCCACGATGGCTCGGTCCCCTCTATTCTCGCCATGGACCCGACGGCGTGGGGCT CGAATTCACTACTTCCTATCTCGCGCCTCAATCGTCGCTCAAGGTGA
Upstream 100 bases:
>100_bases TTGCGGTGAAGACGCTTCAGATGGCGGCAAACATCGCGGCCAATTGCGATGGATGCGTGCGCGTCTTTCTTGACCCCGGA AAAGACCCCGGAAAACCGGT
Downstream 100 bases:
>100_bases TTGTTAAGACAGTCGGGTTAATCAGCGAAACAAAATCACTCGCGTTGCAGTGATCGTCACTTTGAAACGCATAGGCGAGG CCATCGATCGCGTTCGCATG
Product: lanthionine synthetase C family protein
Products: NA
Alternate protein names: Lantibiotic Mersacidin Modifying; Aminoglycoside Phosphotransferase; Lanthionine Synthetase C-Like; Mrsm Protein; Lantibiotic Protein; Lanthionine Synthetase C-Like Protein
Number of amino acids: Translated: 788; Mature: 787
Protein sequence:
>788_residues MSSPSPANSAGALESLVRRLRVFPDLTGFEWFGVPQAITSSPTPGASETRKLLRDAVTTCLYENFYCTGIAMPHRDRSLR ERSNRYSRFVQSVLNANSTRVAWSPTKVLRVTESAVVTSLGDVSIYTDRTSRLLNTLDGRPIPPDAASPFPSAVKVGARS WTLSASPGFILMIGRLELTGGQGAFHRVYWNLNPTGAAEFVAAATHNLNRLRIPFRLKLLAEPRHYDLRLDRAIVYVNLR AAKAREALAETYRQISHHLSEGVPAMTCTIAPGLAVAEDPGDGTSFGMHRCRLIAEGFVRSAENALTAPTDVLAQVERVF AHNGINLDRPHHRREIDDAYTVDFARLLDRTPSPKSIQADAAPDVPPEVSWLSIADTIGRQVAADAFWSGDRCQWMGGEM DRSNQVVFRTLSGNLYGGVAGIGHFLAELAYRTQRDELAATALGAMRQALVTAEPDGPGGLYDGTLGTVLTATRAARALG DSKLLEQASAMARRLAARTPERGPDLLNGLAGQIVGFLILADLVPDHGFRCRAIEVGGLLVESAEYADTGCSWSNPLIES TANLTGLSHGTTGIAVALAELWRSTGDRAFFDAAAGAIAYEDAAFSEKHSNWPDYRLSRDGTKHLRYTNFWCHGAPGIIL GRLRLSQLMGLREPPPHLAIAMESFRRAVEINAHRRGVNFSLCHGVAGNTEILRETSRFEPAGAAWQQRAAETADACWRA GAGFYTTSRVWPCGDIGDNPSMMLGRSGIGYAYLRLHDGSVPSILAMDPTAWGSNSLLPISRLNRRSR
Sequences:
>Translated_788_residues MSSPSPANSAGALESLVRRLRVFPDLTGFEWFGVPQAITSSPTPGASETRKLLRDAVTTCLYENFYCTGIAMPHRDRSLR ERSNRYSRFVQSVLNANSTRVAWSPTKVLRVTESAVVTSLGDVSIYTDRTSRLLNTLDGRPIPPDAASPFPSAVKVGARS WTLSASPGFILMIGRLELTGGQGAFHRVYWNLNPTGAAEFVAAATHNLNRLRIPFRLKLLAEPRHYDLRLDRAIVYVNLR AAKAREALAETYRQISHHLSEGVPAMTCTIAPGLAVAEDPGDGTSFGMHRCRLIAEGFVRSAENALTAPTDVLAQVERVF AHNGINLDRPHHRREIDDAYTVDFARLLDRTPSPKSIQADAAPDVPPEVSWLSIADTIGRQVAADAFWSGDRCQWMGGEM DRSNQVVFRTLSGNLYGGVAGIGHFLAELAYRTQRDELAATALGAMRQALVTAEPDGPGGLYDGTLGTVLTATRAARALG DSKLLEQASAMARRLAARTPERGPDLLNGLAGQIVGFLILADLVPDHGFRCRAIEVGGLLVESAEYADTGCSWSNPLIES TANLTGLSHGTTGIAVALAELWRSTGDRAFFDAAAGAIAYEDAAFSEKHSNWPDYRLSRDGTKHLRYTNFWCHGAPGIIL GRLRLSQLMGLREPPPHLAIAMESFRRAVEINAHRRGVNFSLCHGVAGNTEILRETSRFEPAGAAWQQRAAETADACWRA GAGFYTTSRVWPCGDIGDNPSMMLGRSGIGYAYLRLHDGSVPSILAMDPTAWGSNSLLPISRLNRRSR >Mature_787_residues SSPSPANSAGALESLVRRLRVFPDLTGFEWFGVPQAITSSPTPGASETRKLLRDAVTTCLYENFYCTGIAMPHRDRSLRE RSNRYSRFVQSVLNANSTRVAWSPTKVLRVTESAVVTSLGDVSIYTDRTSRLLNTLDGRPIPPDAASPFPSAVKVGARSW TLSASPGFILMIGRLELTGGQGAFHRVYWNLNPTGAAEFVAAATHNLNRLRIPFRLKLLAEPRHYDLRLDRAIVYVNLRA AKAREALAETYRQISHHLSEGVPAMTCTIAPGLAVAEDPGDGTSFGMHRCRLIAEGFVRSAENALTAPTDVLAQVERVFA HNGINLDRPHHRREIDDAYTVDFARLLDRTPSPKSIQADAAPDVPPEVSWLSIADTIGRQVAADAFWSGDRCQWMGGEMD RSNQVVFRTLSGNLYGGVAGIGHFLAELAYRTQRDELAATALGAMRQALVTAEPDGPGGLYDGTLGTVLTATRAARALGD SKLLEQASAMARRLAARTPERGPDLLNGLAGQIVGFLILADLVPDHGFRCRAIEVGGLLVESAEYADTGCSWSNPLIEST ANLTGLSHGTTGIAVALAELWRSTGDRAFFDAAAGAIAYEDAAFSEKHSNWPDYRLSRDGTKHLRYTNFWCHGAPGIILG RLRLSQLMGLREPPPHLAIAMESFRRAVEINAHRRGVNFSLCHGVAGNTEILRETSRFEPAGAAWQQRAAETADACWRAG AGFYTTSRVWPCGDIGDNPSMMLGRSGIGYAYLRLHDGSVPSILAMDPTAWGSNSLLPISRLNRRSR
Specific function: Unknown
COG id: COG4403
COG function: function code V; Lantibiotic modifying enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85640; Mature: 85509
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPSPANSAGALESLVRRLRVFPDLTGFEWFGVPQAITSSPTPGASETRKLLRDAVTTC CCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCHHHHHHHHHHHHHHH LYENFYCTGIAMPHRDRSLRERSNRYSRFVQSVLNANSTRVAWSPTKVLRVTESAVVTSL HHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHEEEHHHHHHHHC GDVSIYTDRTSRLLNTLDGRPIPPDAASPFPSAVKVGARSWTLSASPGFILMIGRLELTG CCEEEEECHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCEEEEEEEEEECC GQGAFHRVYWNLNPTGAAEFVAAATHNLNRLRIPFRLKLLAEPRHYDLRLDRAIVYVNLR CCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCEEEEEEECCCCCCEEEEEEEEEEEEH AAKAREALAETYRQISHHLSEGVPAMTCTIAPGLAVAEDPGDGTSFGMHRCRLIAEGFVR HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHH SAENALTAPTDVLAQVERVFAHNGINLDRPHHRREIDDAYTVDFARLLDRTPSPKSIQAD HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCEECC AAPDVPPEVSWLSIADTIGRQVAADAFWSGDRCQWMGGEMDRSNQVVFRTLSGNLYGGVA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCHHH GIGHFLAELAYRTQRDELAATALGAMRQALVTAEPDGPGGLYDGTLGTVLTATRAARALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHC DSKLLEQASAMARRLAARTPERGPDLLNGLAGQIVGFLILADLVPDHGFRCRAIEVGGLL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEE VESAEYADTGCSWSNPLIESTANLTGLSHGTTGIAVALAELWRSTGDRAFFDAAAGAIAY EECCHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEE EDAAFSEKHSNWPDYRLSRDGTKHLRYTNFWCHGAPGIILGRLRLSQLMGLREPPPHLAI CCCHHHHCCCCCCCCEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHH AMESFRRAVEINAHRRGVNFSLCHGVAGNTEILRETSRFEPAGAAWQQRAAETADACWRA HHHHHHHHHHHCHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC GAGFYTTSRVWPCGDIGDNPSMMLGRSGIGYAYLRLHDGSVPSILAMDPTAWGSNSLLPI CCCCEECCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCH SRLNRRSR HHHHCCCC >Mature Secondary Structure SSPSPANSAGALESLVRRLRVFPDLTGFEWFGVPQAITSSPTPGASETRKLLRDAVTTC CCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCHHHHHHHHHHHHHHH LYENFYCTGIAMPHRDRSLRERSNRYSRFVQSVLNANSTRVAWSPTKVLRVTESAVVTSL HHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHEEEHHHHHHHHC GDVSIYTDRTSRLLNTLDGRPIPPDAASPFPSAVKVGARSWTLSASPGFILMIGRLELTG CCEEEEECHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCEEEEEEEEEECC GQGAFHRVYWNLNPTGAAEFVAAATHNLNRLRIPFRLKLLAEPRHYDLRLDRAIVYVNLR CCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCEEEEEEECCCCCCEEEEEEEEEEEEH AAKAREALAETYRQISHHLSEGVPAMTCTIAPGLAVAEDPGDGTSFGMHRCRLIAEGFVR HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHH SAENALTAPTDVLAQVERVFAHNGINLDRPHHRREIDDAYTVDFARLLDRTPSPKSIQAD HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCEECC AAPDVPPEVSWLSIADTIGRQVAADAFWSGDRCQWMGGEMDRSNQVVFRTLSGNLYGGVA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCHHH GIGHFLAELAYRTQRDELAATALGAMRQALVTAEPDGPGGLYDGTLGTVLTATRAARALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHC DSKLLEQASAMARRLAARTPERGPDLLNGLAGQIVGFLILADLVPDHGFRCRAIEVGGLL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEE VESAEYADTGCSWSNPLIESTANLTGLSHGTTGIAVALAELWRSTGDRAFFDAAAGAIAY EECCHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEE EDAAFSEKHSNWPDYRLSRDGTKHLRYTNFWCHGAPGIILGRLRLSQLMGLREPPPHLAI CCCHHHHCCCCCCCCEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHH AMESFRRAVEINAHRRGVNFSLCHGVAGNTEILRETSRFEPAGAAWQQRAAETADACWRA HHHHHHHHHHHCHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC GAGFYTTSRVWPCGDIGDNPSMMLGRSGIGYAYLRLHDGSVPSILAMDPTAWGSNSLLPI CCCCEECCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCH SRLNRRSR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA