| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625418
Identifier: 116625418
GI number: 116625418
Start: 7981800
End: 7982711
Strand: Direct
Name: 116625418
Synonym: Acid_6363
Alternate gene names: NA
Gene position: 7981800-7982711 (Clockwise)
Preceding gene: 116625417
Following gene: 116625423
Centisome position: 80.09
GC content: 65.13
Gene sequence:
>912_bases GTGGCCGGTGCACAGCAGCAGCAACCCCCGCCTGCTCCCCCCGCGGCAACTCCCCCTCCCGATGGTCCGCGCGTCCCCCG GCCCCGTACACCGCCAAAACCCCGCGGCACTCCCGCGGTCTGCCTCTATTCCCAACTGCTGATCAAAGTGGAGTACGAAG CCGTCGGCATGGTGCTGCGCGATCTCGGCTTCGACGGCGCCGATCTCGCCGTGGTTCCGGGCAGCCACGTGCCGCCCGAC CAGGCCAATTCGGACCTGATGCGCGCTATCGAAGCCATCAGCGGCGTCGGACTCGAAGTCCCGATCATCTCCACTTCCGT GGTCAGCGGCCAGGACCCTTACGGCCGCCAGATTCTCGGTATCGCGGGTTTCATGGGCATCGGCCTCTTCCGCCCCGGGT ATTGGAAATACGGCGCATCTCCGAATCGCCAGATGCGCATCGCGGAGGTGCAGCGCGACCTGCTCGGACTGGCTTCCATT GCGCGCGCCTACAACGTCGCCACCGCTTTTCACAATGGAAACGACGATGCCGTTGGCGCCAATCTCGGTGACGTGAACAC CTTCCTGCGCAACATTGATCCGCGCTGGGTCGGCTACGATTTCGACCCCGGCTTCGCCGCCGAAATGGCCGGGCGCGATG CCGCCGACACATCGTTGAGCCTGGCCCTGCCGCGCCTCAAAGCAGTCACCGTTCGCGATTTCACCTGGTCTAAGGAAGGT AAGGCCAGCCCATGTCCGCTCGGCCAGGGCGTGGTCGATTGGAAGGCCTTTTTCACCGCCCTCGCCCGCGCCCGCTTCAC CGGACCGATCACGATCCAGGTGGCCTACTCGTCACCCAACGAATTGAACGCCTTCCGCCGGGATCTCGAGTTCGTCCGCA AACAAATCGCCGCCGCTTACCCCGCGCTCTGA
Upstream 100 bases:
>100_bases TACCACACCGGTCGCCAAACCCAAGGCCAAGTAGAACGTACAATAGCAACAGCGGATGGCGATCAGCAGACGACAACTTC TCGCGGGTTTGGCGGCGACC
Downstream 100 bases:
>100_bases TCCCACCGGATCTGCTGCAGCAGCGCCTTCATCCGCTCCCCCTGCAGCGGATTCACCATTTGCACGAAGCCGACGCGTCC TTCCAGATGCGCACGAAAAT
Product: xylose isomerase domain-containing protein
Products: NA
Alternate protein names: Xylose Isomerase Domain-Containing Protein; TIM Barrel Domain-Containing Protein; Signal Peptide
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MAGAQQQQPPPAPPAATPPPDGPRVPRPRTPPKPRGTPAVCLYSQLLIKVEYEAVGMVLRDLGFDGADLAVVPGSHVPPD QANSDLMRAIEAISGVGLEVPIISTSVVSGQDPYGRQILGIAGFMGIGLFRPGYWKYGASPNRQMRIAEVQRDLLGLASI ARAYNVATAFHNGNDDAVGANLGDVNTFLRNIDPRWVGYDFDPGFAAEMAGRDAADTSLSLALPRLKAVTVRDFTWSKEG KASPCPLGQGVVDWKAFFTALARARFTGPITIQVAYSSPNELNAFRRDLEFVRKQIAAAYPAL
Sequences:
>Translated_303_residues MAGAQQQQPPPAPPAATPPPDGPRVPRPRTPPKPRGTPAVCLYSQLLIKVEYEAVGMVLRDLGFDGADLAVVPGSHVPPD QANSDLMRAIEAISGVGLEVPIISTSVVSGQDPYGRQILGIAGFMGIGLFRPGYWKYGASPNRQMRIAEVQRDLLGLASI ARAYNVATAFHNGNDDAVGANLGDVNTFLRNIDPRWVGYDFDPGFAAEMAGRDAADTSLSLALPRLKAVTVRDFTWSKEG KASPCPLGQGVVDWKAFFTALARARFTGPITIQVAYSSPNELNAFRRDLEFVRKQIAAAYPAL >Mature_302_residues AGAQQQQPPPAPPAATPPPDGPRVPRPRTPPKPRGTPAVCLYSQLLIKVEYEAVGMVLRDLGFDGADLAVVPGSHVPPDQ ANSDLMRAIEAISGVGLEVPIISTSVVSGQDPYGRQILGIAGFMGIGLFRPGYWKYGASPNRQMRIAEVQRDLLGLASIA RAYNVATAFHNGNDDAVGANLGDVNTFLRNIDPRWVGYDFDPGFAAEMAGRDAADTSLSLALPRLKAVTVRDFTWSKEGK ASPCPLGQGVVDWKAFFTALARARFTGPITIQVAYSSPNELNAFRRDLEFVRKQIAAAYPAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32483; Mature: 32352
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAQQQQPPPAPPAATPPPDGPRVPRPRTPPKPRGTPAVCLYSQLLIKVEYEAVGMVLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DLGFDGADLAVVPGSHVPPDQANSDLMRAIEAISGVGLEVPIISTSVVSGQDPYGRQILG HCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHH IAGFMGIGLFRPGYWKYGASPNRQMRIAEVQRDLLGLASIARAYNVATAFHNGNDDAVGA HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC NLGDVNTFLRNIDPRWVGYDFDPGFAAEMAGRDAADTSLSLALPRLKAVTVRDFTWSKEG CCHHHHHHHHCCCCCEECCCCCCCHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCCCC KASPCPLGQGVVDWKAFFTALARARFTGPITIQVAYSSPNELNAFRRDLEFVRKQIAAAY CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHC PAL CCC >Mature Secondary Structure AGAQQQQPPPAPPAATPPPDGPRVPRPRTPPKPRGTPAVCLYSQLLIKVEYEAVGMVLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DLGFDGADLAVVPGSHVPPDQANSDLMRAIEAISGVGLEVPIISTSVVSGQDPYGRQILG HCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHH IAGFMGIGLFRPGYWKYGASPNRQMRIAEVQRDLLGLASIARAYNVATAFHNGNDDAVGA HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC NLGDVNTFLRNIDPRWVGYDFDPGFAAEMAGRDAADTSLSLALPRLKAVTVRDFTWSKEG CCHHHHHHHHCCCCCEECCCCCCCHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCCCC KASPCPLGQGVVDWKAFFTALARARFTGPITIQVAYSSPNELNAFRRDLEFVRKQIAAAY CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHC PAL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA