| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625417
Identifier: 116625417
GI number: 116625417
Start: 7980717
End: 7981733
Strand: Direct
Name: 116625417
Synonym: Acid_6362
Alternate gene names: NA
Gene position: 7980717-7981733 (Clockwise)
Preceding gene: 116625416
Following gene: 116625418
Centisome position: 80.08
GC content: 67.06
Gene sequence:
>1017_bases GTGCTCCGCCCGCTCGCGATACTCCTGCTCGCCCTGTCCGCAGCCGCCGCCCAGGCTCCCCTGACCGGCGATATCAATTT TTATGGCCTTCGTAAGCTGACGCCGGACAAGATGTTAGAGACGATCGCCCTGAAATCCGGCGACCCACTGCCACCCTCGA AAGGCGACCTCGAAGATCGCCTCGAAGAGATTCCGGGCGTGGCCGCGGCGCGCGTGGAGGCCGTCTGCTGCGACGGCCCG GTGGCGGTCCTCTTCATCGGCATCGAGGAGCGCGGCTCCCCCCACTTCGATACCCGCGCCGCGCCCATCGGCACCGCCAC TCTCCCGGAGGATCTGATGAGTTCCTACCGCGCCTATATGGCTGCCGTCGAGCGCGCCGCGCAGCTAGGCTCGGCCGCCG AAGATCTCACCGCCGGCGAATCGCGTATGTCCGACCCGGCCGCCCGCGCACTGCAGGAACAGTTCACCGCCTTCGCGACC GAGCACCTCGACACTCTTCGCGACGTTCTCCGCAACGGACCCGAACCGGAGGAGCGCGCGATCGCGGCGGCCGTCACCGG CTACGCGCCCAAGAAAAGCGACGTGATCAAGGACCTGCAATTCGCGCTGCAGGACCCGGAACCCGCGGTTCGCGCCAATG CCGTCCGCGCCCTTCGGGCCATAGCCGTCCTGGCCCAGAAGCGCCCCGAACTGAAGCTGAAAATCGAACCCACCTGGATG GTGGCCATGTTGAACTCCCTCTCGCTGAGCGACCGGCAGCAGGCCGCCGAGGCGCTGGTCACCTTGACCGAGCAACCGAA CCCGGCCGCGCTCGACCTGATCCGCGAACGCGGCCTGCCGGCGCTCGCCGAAATGGCGCGCTGGAAGACCCTGCGCTACG CACTCCCGTCCTTTCTCCTGCTGGGCCGCACCGCTGGAATTCCAGACCGGGAATTGCAGGACCAATGGCAAAAAGGCGAC CGCGAAACCGCCATCCGCACAGCTACCACACCGGTCGCCAAACCCAAGGCCAAGTAG
Upstream 100 bases:
>100_bases CCTACCAGGGAAACACCATCGAATTGCCGGTGATCGGGCCCATCGCCCGCCAGCAAGCGGGAGTCTGAACCGCAAATGGC GGGCAGCGCGTCTGATTAGT
Downstream 100 bases:
>100_bases AACGTACAATAGCAACAGCGGATGGCGATCAGCAGACGACAACTTCTCGCGGGTTTGGCGGCGACCGTGGCCGGTGCACA GCAGCAGCAACCCCCGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLRPLAILLLALSAAAAQAPLTGDINFYGLRKLTPDKMLETIALKSGDPLPPSKGDLEDRLEEIPGVAAARVEAVCCDGP VAVLFIGIEERGSPHFDTRAAPIGTATLPEDLMSSYRAYMAAVERAAQLGSAAEDLTAGESRMSDPAARALQEQFTAFAT EHLDTLRDVLRNGPEPEERAIAAAVTGYAPKKSDVIKDLQFALQDPEPAVRANAVRALRAIAVLAQKRPELKLKIEPTWM VAMLNSLSLSDRQQAAEALVTLTEQPNPAALDLIRERGLPALAEMARWKTLRYALPSFLLLGRTAGIPDRELQDQWQKGD RETAIRTATTPVAKPKAK
Sequences:
>Translated_338_residues MLRPLAILLLALSAAAAQAPLTGDINFYGLRKLTPDKMLETIALKSGDPLPPSKGDLEDRLEEIPGVAAARVEAVCCDGP VAVLFIGIEERGSPHFDTRAAPIGTATLPEDLMSSYRAYMAAVERAAQLGSAAEDLTAGESRMSDPAARALQEQFTAFAT EHLDTLRDVLRNGPEPEERAIAAAVTGYAPKKSDVIKDLQFALQDPEPAVRANAVRALRAIAVLAQKRPELKLKIEPTWM VAMLNSLSLSDRQQAAEALVTLTEQPNPAALDLIRERGLPALAEMARWKTLRYALPSFLLLGRTAGIPDRELQDQWQKGD RETAIRTATTPVAKPKAK >Mature_338_residues MLRPLAILLLALSAAAAQAPLTGDINFYGLRKLTPDKMLETIALKSGDPLPPSKGDLEDRLEEIPGVAAARVEAVCCDGP VAVLFIGIEERGSPHFDTRAAPIGTATLPEDLMSSYRAYMAAVERAAQLGSAAEDLTAGESRMSDPAARALQEQFTAFAT EHLDTLRDVLRNGPEPEERAIAAAVTGYAPKKSDVIKDLQFALQDPEPAVRANAVRALRAIAVLAQKRPELKLKIEPTWM VAMLNSLSLSDRQQAAEALVTLTEQPNPAALDLIRERGLPALAEMARWKTLRYALPSFLLLGRTAGIPDRELQDQWQKGD RETAIRTATTPVAKPKAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36540; Mature: 36540
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPLAILLLALSAAAAQAPLTGDINFYGLRKLTPDKMLETIALKSGDPLPPSKGDLEDR CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH LEEIPGVAAARVEAVCCDGPVAVLFIGIEERGSPHFDTRAAPIGTATLPEDLMSSYRAYM HHHCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH AAVERAAQLGSAAEDLTAGESRMSDPAARALQEQFTAFATEHLDTLRDVLRNGPEPEERA HHHHHHHHHCCHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IAAAVTGYAPKKSDVIKDLQFALQDPEPAVRANAVRALRAIAVLAQKRPELKLKIEPTWM HHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHH VAMLNSLSLSDRQQAAEALVTLTEQPNPAALDLIRERGLPALAEMARWKTLRYALPSFLL HHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LGRTAGIPDRELQDQWQKGDRETAIRTATTPVAKPKAK HHCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLRPLAILLLALSAAAAQAPLTGDINFYGLRKLTPDKMLETIALKSGDPLPPSKGDLEDR CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH LEEIPGVAAARVEAVCCDGPVAVLFIGIEERGSPHFDTRAAPIGTATLPEDLMSSYRAYM HHHCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH AAVERAAQLGSAAEDLTAGESRMSDPAARALQEQFTAFATEHLDTLRDVLRNGPEPEERA HHHHHHHHHCCHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IAAAVTGYAPKKSDVIKDLQFALQDPEPAVRANAVRALRAIAVLAQKRPELKLKIEPTWM HHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHH VAMLNSLSLSDRQQAAEALVTLTEQPNPAALDLIRERGLPALAEMARWKTLRYALPSFLL HHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LGRTAGIPDRELQDQWQKGDRETAIRTATTPVAKPKAK HHCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA