| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625351
Identifier: 116625351
GI number: 116625351
Start: 7914161
End: 7915534
Strand: Direct
Name: 116625351
Synonym: Acid_6296
Alternate gene names: NA
Gene position: 7914161-7915534 (Clockwise)
Preceding gene: 116625350
Following gene: 116625353
Centisome position: 79.41
GC content: 61.64
Gene sequence:
>1374_bases GTGGCGCAAAAAGCTTTTTCCAGAAGGCATTTCTTCTTTGGTTCCCTGCTGGCGGGCGCGGTCCCGAACGCGGGTTTCGG CAGTTCTGCCTCGCTCAAGCGGCTGGGATACAAATCTCCCAACGAAAAGCTGAATATCGCGGCGATCGGCGCGGGCGGCA AAGGGAACAGCGACATCGCCGGTTGCAGCACGGAGAACATCGTCGCGATGGCGGATCCCGACGATCAGCGAGCCGCCAAG ACCTTCGCGGCGTATCCGAAGGTGCCGAAGTACAAAGACTTCCGGCGCATGCTCGATAAAGAGGTTAAGAACATCGATGC CGTGCTGGTCTCCTGCCCGGATCACTTGCACGGCACCGCCGCCATGTGGGCGATGGCGCGCGGCAAACATGTGTACTGCC AGAAGCCATTGACGCGCACGGTTTGGGAGGCGCAGCAGTTGACCCTGGCGGCGGAGAAATACAACGTCGCTACCCAGATG GGAAACCAGGGCTACTCGCAGGTGGGCGCGCGCGAGTGCTGCGAGATTATCTGGAACGGCGATATCGGAAACGTGACCGA GGTCCACGCCTGGACCAACCGTCCCGACCCTTATTGGCCGCAGGGTCCGGATGTCGTGCCGAAGGATGGGCCCATTCCCG CCACGCTGGATTGGGACGCCTGGCTGGCCGACGCTGAACCGCGGACGTACAGCCCATCCTACGTGCCGCACAACTGGCGC GCGTTTCCGGATTTCGGCTGCGGCGCCATCGGCGACATGGCCTGTCACATTCTCGGCACGCCGAACATGGCGATGCGGCT CGACGCGCCGGTCAGTGTCGAGTGCCTCAAGATGGAAGGCAAGTCGCAGTACACCTTCCCGTACCGGGTCGCCATCCGCT TCGATTTTCCGGAGCGCGGCAATATGCCCGCGATGAAGCTCTTCTGGTATGACCGAATGACTGCGCCGCCCAAGTTCGAG GGCGTTCCCGAGGGAGAACTGATCGGCGATAAGGATGTCAACGGCAGCCTATTCATCGGCGATAAGGGCATGGTGACCAC CGGTTGCTACGGCGAGCGAACGCGGCTGGTTCCGGCCGAGAAAATGGCGGATTACAAGAAGCCGCCGGAAGTTTTGCCTC GCTGCCCCGGCCCCGCGGAGGATTGGGTGAAGGCGCATTACCGCGACTGGATCCGTGCCGCCAAAGGCGGTGTGCCGGCC TGCTCGAACTTCAGCGTCTCGGGACCCTTCGTGCAGTGGATGCTGCTCGGCGTGATCGCGATGCGGCTGGAAGGCAAGCT CATGTGGGACGCCGATAAATCGCGTTTCACCAACAATGAGGAAGCCAACCGGCTCTTAATGCCGAAGTTCCGCAAAGGCT GGAAGTTCGTATAA
Upstream 100 bases:
>100_bases TAACGCCTATCGGGGTCTGCCCCAACTGGCAATTGGGCAGGATTGCCTGCCCCGCAAACGGTACAACACCGTGCGATATG ATGGACGCCGGAGTTCCCAC
Downstream 100 bases:
>100_bases AAAACTCTACTTTGCCGGCACCTTTTCGAAAGCGGCGAGGTCTTTGGCTGCCTTCGTCTCCACGCCCGGTTTGCCCAGGA ACCCGAGGTCGCGGAACCAA
Product: oxidoreductase domain-containing protein
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; NADH-Dependent Dehydrogenase; Oxidoreductase; Dehydrogenase; NADH-Dependent Dyhydrogenase; Dehydrogenase-Like Protein; NADH-Dependent Dihydrogenase; NADH-Dependent Deydrogenase; Dehydrogenase And Relate Protein; Dehydrogenases Related Protein
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MAQKAFSRRHFFFGSLLAGAVPNAGFGSSASLKRLGYKSPNEKLNIAAIGAGGKGNSDIAGCSTENIVAMADPDDQRAAK TFAAYPKVPKYKDFRRMLDKEVKNIDAVLVSCPDHLHGTAAMWAMARGKHVYCQKPLTRTVWEAQQLTLAAEKYNVATQM GNQGYSQVGARECCEIIWNGDIGNVTEVHAWTNRPDPYWPQGPDVVPKDGPIPATLDWDAWLADAEPRTYSPSYVPHNWR AFPDFGCGAIGDMACHILGTPNMAMRLDAPVSVECLKMEGKSQYTFPYRVAIRFDFPERGNMPAMKLFWYDRMTAPPKFE GVPEGELIGDKDVNGSLFIGDKGMVTTGCYGERTRLVPAEKMADYKKPPEVLPRCPGPAEDWVKAHYRDWIRAAKGGVPA CSNFSVSGPFVQWMLLGVIAMRLEGKLMWDADKSRFTNNEEANRLLMPKFRKGWKFV
Sequences:
>Translated_457_residues MAQKAFSRRHFFFGSLLAGAVPNAGFGSSASLKRLGYKSPNEKLNIAAIGAGGKGNSDIAGCSTENIVAMADPDDQRAAK TFAAYPKVPKYKDFRRMLDKEVKNIDAVLVSCPDHLHGTAAMWAMARGKHVYCQKPLTRTVWEAQQLTLAAEKYNVATQM GNQGYSQVGARECCEIIWNGDIGNVTEVHAWTNRPDPYWPQGPDVVPKDGPIPATLDWDAWLADAEPRTYSPSYVPHNWR AFPDFGCGAIGDMACHILGTPNMAMRLDAPVSVECLKMEGKSQYTFPYRVAIRFDFPERGNMPAMKLFWYDRMTAPPKFE GVPEGELIGDKDVNGSLFIGDKGMVTTGCYGERTRLVPAEKMADYKKPPEVLPRCPGPAEDWVKAHYRDWIRAAKGGVPA CSNFSVSGPFVQWMLLGVIAMRLEGKLMWDADKSRFTNNEEANRLLMPKFRKGWKFV >Mature_456_residues AQKAFSRRHFFFGSLLAGAVPNAGFGSSASLKRLGYKSPNEKLNIAAIGAGGKGNSDIAGCSTENIVAMADPDDQRAAKT FAAYPKVPKYKDFRRMLDKEVKNIDAVLVSCPDHLHGTAAMWAMARGKHVYCQKPLTRTVWEAQQLTLAAEKYNVATQMG NQGYSQVGARECCEIIWNGDIGNVTEVHAWTNRPDPYWPQGPDVVPKDGPIPATLDWDAWLADAEPRTYSPSYVPHNWRA FPDFGCGAIGDMACHILGTPNMAMRLDAPVSVECLKMEGKSQYTFPYRVAIRFDFPERGNMPAMKLFWYDRMTAPPKFEG VPEGELIGDKDVNGSLFIGDKGMVTTGCYGERTRLVPAEKMADYKKPPEVLPRCPGPAEDWVKAHYRDWIRAAKGGVPAC SNFSVSGPFVQWMLLGVIAMRLEGKLMWDADKSRFTNNEEANRLLMPKFRKGWKFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50795; Mature: 50663
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKAFSRRHFFFGSLLAGAVPNAGFGSSASLKRLGYKSPNEKLNIAAIGAGGKGNSDIA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCCCC GCSTENIVAMADPDDQRAAKTFAAYPKVPKYKDFRRMLDKEVKNIDAVLVSCPDHLHGTA CCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHCHHH AMWAMARGKHVYCQKPLTRTVWEAQQLTLAAEKYNVATQMGNQGYSQVGARECCEIIWNG HHHHHHCCCEEEECCCHHHHHHHHHHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHEECC DIGNVTEVHAWTNRPDPYWPQGPDVVPKDGPIPATLDWDAWLADAEPRTYSPSYVPHNWR CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECHHHEECCCCCCCCCCCCCCCCCC AFPDFGCGAIGDMACHILGTPNMAMRLDAPVSVECLKMEGKSQYTFPYRVAIRFDFPERG CCCCCCCCCHHHHEEEEECCCCCEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCCC NMPAMKLFWYDRMTAPPKFEGVPEGELIGDKDVNGSLFIGDKGMVTTGCYGERTRLVPAE CCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCEEECCCCCCEECCCHH KMADYKKPPEVLPRCPGPAEDWVKAHYRDWIRAAKGGVPACSNFSVSGPFVQWMLLGVIA HHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH MRLEGKLMWDADKSRFTNNEEANRLLMPKFRKGWKFV HHHCCEEEECCCHHHCCCCHHHCEEECHHHCCCCCCC >Mature Secondary Structure AQKAFSRRHFFFGSLLAGAVPNAGFGSSASLKRLGYKSPNEKLNIAAIGAGGKGNSDIA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCCCC GCSTENIVAMADPDDQRAAKTFAAYPKVPKYKDFRRMLDKEVKNIDAVLVSCPDHLHGTA CCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHCHHH AMWAMARGKHVYCQKPLTRTVWEAQQLTLAAEKYNVATQMGNQGYSQVGARECCEIIWNG HHHHHHCCCEEEECCCHHHHHHHHHHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHEECC DIGNVTEVHAWTNRPDPYWPQGPDVVPKDGPIPATLDWDAWLADAEPRTYSPSYVPHNWR CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECHHHEECCCCCCCCCCCCCCCCCC AFPDFGCGAIGDMACHILGTPNMAMRLDAPVSVECLKMEGKSQYTFPYRVAIRFDFPERG CCCCCCCCCHHHHEEEEECCCCCEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCCC NMPAMKLFWYDRMTAPPKFEGVPEGELIGDKDVNGSLFIGDKGMVTTGCYGERTRLVPAE CCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCEEECCCCCCEECCCHH KMADYKKPPEVLPRCPGPAEDWVKAHYRDWIRAAKGGVPACSNFSVSGPFVQWMLLGVIA HHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH MRLEGKLMWDADKSRFTNNEEANRLLMPKFRKGWKFV HHHCCEEEECCCHHHCCCCHHHCEEECHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA