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The map label for this gene is allB [C]

Identifier: 116625209

GI number: 116625209

Start: 7696266

End: 7697537

Strand: Direct

Name: allB [C]

Synonym: Acid_6154

Alternate gene names: 116625209

Gene position: 7696266-7697537 (Clockwise)

Preceding gene: 116625205

Following gene: 116625212

Centisome position: 77.23

GC content: 60.46

Gene sequence:

>1272_bases
ATGACTCTCGGACGTTTTCTGACGGCTCTCGCCTTCGCTGCTTGCGCTTCGGCGCAACCCGATTTTGATCTGCTGATCAA
GGGCGGGCATGTCATAGATAGCAAGAACAAGCTCAACGCCGTCCGCGATATCGCGATCAAGGCCGGTAAGATTGCCGCGG
TGGATGCCAACATTCCGGCTTCGCGCGCGTCCAAAGTGGTGGACGCCTCCGGCCTCTACGTCACACCGGGACTGGTCGAT
ATTCATGTGCACGTCTATCCCGGCCTGGTGCGCAACTCTTACGCCGGAGGCTCGTTCGGGCTGCAGCCCGACGGCTTCAC
GCTTCGCTCCGGCGTAACCACGGTCGCCGATGCCGGCTCGTCGGGATGGCGTAACTTCGAGGACTTCAAGACGCGCATCA
TCGACAACCAGAAGACTCGCGTGCTCGCCTTCCTCAACATCGTCGGCGCGGGGATGGGTCCGGGACAAATTGAGCAGAAC
CTCGAGGATATGGAGGTAAAACCCGCGGCCGACACCGCCATAAAGTATAAAGGCACCATCGTCGGCATCAAGAGCGCGCA
TTTCAACGGCCCGGAATGGACCCCGTACATCAACGCTGAGGAGGTCGGGAAGATTGCTCACATTCCCGTGATGGTGGATT
TCGGCGGTAACGTCCGTGCCGGCCGCACCCTGTATGACTTACTGACGAAGTACTTCCGCCGGGGCGACATCTTCACCCAC
ATGTACGGCGGCCGCCGCGGCGAGCAGGACGCCGAAACGAAAGGCCCGAGCCAGGCAATGGTCGAGGGCCGTAAACGCGG
AGTGATCTTTGACGTCGGCCACGGCAATGGCAGTTTCCTATGGAACTGCGCGGTTCCGGTGATGAAGGCGGGCTTCATCC
CGGACTCGATTTCGACGGACCTGCACTACGCCAGCATGATGGGAGGAATGAAGGACATGCTCAACGTGATGGACAAGTTC
CTCGCCCTGGGAATGCCGCTGGATGAGGTGATCCTCCGCTCCACCTGGAATCCCGCGAAGGAGATCCAGCACGAAGAGCT
CGGCCACCTCTCCGTCGGAGCGCCGGCGGATATCGCGGTGCTTCGACTGGAGAAGGGCAAGTTCGGTTTCATTGACCAGA
TTGGCGGCAAGCTGGAAGGCACACAGAAGCTGGATTGCGAACTCACGCTCCGCGACGGAGTGGTTGTGTACGATCTGAAT
GGCATGGCTGCCACGCCGTGGGAAAAGCTTCCGGTGCAGCCCCTACCCACACCCCGGTCGCCCGCAAAATAG

Upstream 100 bases:

>100_bases
AAAGTCAAGGGTTTGTAATATAGCCTGCATTCCTCGGGCGCCTTGCAATTGCTGGCGGAGCAATGATATAAGTCTCGCGG
TGACCCCCGGAGGGCATCCC

Downstream 100 bases:

>100_bases
CTCCGGCCTCAGGTGCGGGCGAATTGCGATTCTTTCGGTGGCTGGTAGGCCACACCGAGATGGGGCGTCTCCAGGCGAGC
ATGGTCCTGTACTTTCGAAG

Product: dihydroorotase

Products: Allantoate; H+ [C]

Alternate protein names: Amidohydrolase; Amidohydrolase Family Protein; Metallo-Dependent Hydrolase; Aminohydrolase; Protein PhnM; LOW QUALITY PROTEIN Amidohydrolase

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MTLGRFLTALAFAACASAQPDFDLLIKGGHVIDSKNKLNAVRDIAIKAGKIAAVDANIPASRASKVVDASGLYVTPGLVD
IHVHVYPGLVRNSYAGGSFGLQPDGFTLRSGVTTVADAGSSGWRNFEDFKTRIIDNQKTRVLAFLNIVGAGMGPGQIEQN
LEDMEVKPAADTAIKYKGTIVGIKSAHFNGPEWTPYINAEEVGKIAHIPVMVDFGGNVRAGRTLYDLLTKYFRRGDIFTH
MYGGRRGEQDAETKGPSQAMVEGRKRGVIFDVGHGNGSFLWNCAVPVMKAGFIPDSISTDLHYASMMGGMKDMLNVMDKF
LALGMPLDEVILRSTWNPAKEIQHEELGHLSVGAPADIAVLRLEKGKFGFIDQIGGKLEGTQKLDCELTLRDGVVVYDLN
GMAATPWEKLPVQPLPTPRSPAK

Sequences:

>Translated_423_residues
MTLGRFLTALAFAACASAQPDFDLLIKGGHVIDSKNKLNAVRDIAIKAGKIAAVDANIPASRASKVVDASGLYVTPGLVD
IHVHVYPGLVRNSYAGGSFGLQPDGFTLRSGVTTVADAGSSGWRNFEDFKTRIIDNQKTRVLAFLNIVGAGMGPGQIEQN
LEDMEVKPAADTAIKYKGTIVGIKSAHFNGPEWTPYINAEEVGKIAHIPVMVDFGGNVRAGRTLYDLLTKYFRRGDIFTH
MYGGRRGEQDAETKGPSQAMVEGRKRGVIFDVGHGNGSFLWNCAVPVMKAGFIPDSISTDLHYASMMGGMKDMLNVMDKF
LALGMPLDEVILRSTWNPAKEIQHEELGHLSVGAPADIAVLRLEKGKFGFIDQIGGKLEGTQKLDCELTLRDGVVVYDLN
GMAATPWEKLPVQPLPTPRSPAK
>Mature_422_residues
TLGRFLTALAFAACASAQPDFDLLIKGGHVIDSKNKLNAVRDIAIKAGKIAAVDANIPASRASKVVDASGLYVTPGLVDI
HVHVYPGLVRNSYAGGSFGLQPDGFTLRSGVTTVADAGSSGWRNFEDFKTRIIDNQKTRVLAFLNIVGAGMGPGQIEQNL
EDMEVKPAADTAIKYKGTIVGIKSAHFNGPEWTPYINAEEVGKIAHIPVMVDFGGNVRAGRTLYDLLTKYFRRGDIFTHM
YGGRRGEQDAETKGPSQAMVEGRKRGVIFDVGHGNGSFLWNCAVPVMKAGFIPDSISTDLHYASMMGGMKDMLNVMDKFL
ALGMPLDEVILRSTWNPAKEIQHEELGHLSVGAPADIAVLRLEKGKFGFIDQIGGKLEGTQKLDCELTLRDGVVVYDLNG
MAATPWEKLPVQPLPTPRSPAK

Specific function: Involved In The Anaerobic Utilization Of Allantoin. [C]

COG id: COG3964

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.2.5 [C]

Molecular weight: Translated: 45656; Mature: 45525

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLGRFLTALAFAACASAQPDFDLLIKGGHVIDSKNKLNAVRDIAIKAGKIAAVDANIPA
CCHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCCHHHHHHHHHHHCCCEEEEEECCCCH
SRASKVVDASGLYVTPGLVDIHVHVYPGLVRNSYAGGSFGLQPDGFTLRSGVTTVADAGS
HHHHHEECCCCCEECCCEEEEEEEEECCHHHCCCCCCCCCCCCCCEEECCCCCEECCCCC
SGWRNFEDFKTRIIDNQKTRVLAFLNIVGAGMGPGQIEQNLEDMEVKPAADTAIKYKGTI
CCCCCHHHHHHHHCCCCCHHHEEEEHHHHCCCCCHHHHCCHHHCCCCCCCCCEEEECEEE
VGIKSAHFNGPEWTPYINAEEVGKIAHIPVMVDFGGNVRAGRTLYDLLTKYFRRGDIFTH
EEEEECCCCCCCCCCEECHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEE
MYGGRRGEQDAETKGPSQAMVEGRKRGVIFDVGHGNGSFLWNCAVPVMKAGFIPDSISTD
CCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCEEEEECHHHHHCCCCCCCCCCC
LHYASMMGGMKDMLNVMDKFLALGMPLDEVILRSTWNPAKEIQHEELGHLSVGAPADIAV
HHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCEEE
LRLEKGKFGFIDQIGGKLEGTQKLDCELTLRDGVVVYDLNGMAATPWEKLPVQPLPTPRS
EEEECCCCCCHHHHCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCCC
PAK
CCC
>Mature Secondary Structure 
TLGRFLTALAFAACASAQPDFDLLIKGGHVIDSKNKLNAVRDIAIKAGKIAAVDANIPA
CHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCCHHHHHHHHHHHCCCEEEEEECCCCH
SRASKVVDASGLYVTPGLVDIHVHVYPGLVRNSYAGGSFGLQPDGFTLRSGVTTVADAGS
HHHHHEECCCCCEECCCEEEEEEEEECCHHHCCCCCCCCCCCCCCEEECCCCCEECCCCC
SGWRNFEDFKTRIIDNQKTRVLAFLNIVGAGMGPGQIEQNLEDMEVKPAADTAIKYKGTI
CCCCCHHHHHHHHCCCCCHHHEEEEHHHHCCCCCHHHHCCHHHCCCCCCCCCEEEECEEE
VGIKSAHFNGPEWTPYINAEEVGKIAHIPVMVDFGGNVRAGRTLYDLLTKYFRRGDIFTH
EEEEECCCCCCCCCCEECHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEE
MYGGRRGEQDAETKGPSQAMVEGRKRGVIFDVGHGNGSFLWNCAVPVMKAGFIPDSISTD
CCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCEEEEECHHHHHCCCCCCCCCCC
LHYASMMGGMKDMLNVMDKFLALGMPLDEVILRSTWNPAKEIQHEELGHLSVGAPADIAV
HHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCEEE
LRLEKGKFGFIDQIGGKLEGTQKLDCELTLRDGVVVYDLNGMAATPWEKLPVQPLPTPRS
EEEECCCCCCHHHHCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCCC
PAK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Allantoin; H2O [C]

Specific reaction: Allantoin + H2O --> Allantoate + H+ [C]

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: Dithiothreitol; p-Chloromercuribenzene-sulphonic acid [C]

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA