Click here to switch to the map view.

The map label for this gene is 116625197

Identifier: 116625197

GI number: 116625197

Start: 7681167

End: 7681805

Strand: Direct

Name: 116625197

Synonym: Acid_6142

Alternate gene names: NA

Gene position: 7681167-7681805 (Clockwise)

Preceding gene: 116625196

Following gene: 116625203

Centisome position: 77.08

GC content: 55.4

Gene sequence:

>639_bases
ATGCTGCGCATGTTGCTCGTGATGCTGTCGATTCCGGTCTGGATTGCGGCTCAGGTTCCGAAGAACCGGGCGCCCTATCC
CAACGAACAGTGGGTCCAGCTTTTCAATGGCAAGGACCTCTCGGGATGGGTCAACGTAGGTCACGAGAAATGGACCGTCG
AAGACGGCACGATTCACGGCCAGGGCGTCACGAAGGAGTATGGCTACCTCAGGACCGAGAAGCAGTACAAGGATTTCTGG
CTCTCCATCCGGTTCAAATGCGAGGACGATGGCAATAGTGGAGTTTACTTCCACACCGATTTCAAACCGGGAACCGTGGA
TGTTTCCAAGGGAATGCAGTTCGAGATTGACCGCACGCTCAACCATCACAACGGCGGACTGTACGGCGATGGCCGCGGAT
GGATCGCGTGGCCCTCTCCCGAATACGAACAGGTGATCCGCCCAACCGATTGGAACGAGTTCCTGCTGAAAGTCGAAGGA
AATCACATGGTGGCTATTCTGAACGGTATCGCCATCATCGACTTCACCGATCCGACGCCGAAATCCTTCGATGGCTACAT
CGCACTGCAGTTGCATTCGGGCGGCGAGGGTAACATGCGGTTCAAGGACATCTATCTTCGTGATATGTCGGCGCGATAG

Upstream 100 bases:

>100_bases
AATATGAAGTACCGGAATATCATGATTTCGGTGCCAAAAAAGTAGACCAGGCTCTCACCGAGGCCCCGAGTATTTCATAA
TCGTTCAGGAGAAAACTTCT

Downstream 100 bases:

>100_bases
GACGATCAGGCCATAGCCACAATCTTGTCCAGTGCCGCGGACTTCGCCTGCGCGAAACACTCAGGCCGGGGCATCTCTCG
TGGAAAAATGATGGAACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Conserved Domain Protein; Rhamnosidase; Signal Peptide; Crp/Fnr Family Transcriptional Regulator; N-Acetyl-Galactosamine-6-Sulfatase; Cytochrome C

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MLRMLLVMLSIPVWIAAQVPKNRAPYPNEQWVQLFNGKDLSGWVNVGHEKWTVEDGTIHGQGVTKEYGYLRTEKQYKDFW
LSIRFKCEDDGNSGVYFHTDFKPGTVDVSKGMQFEIDRTLNHHNGGLYGDGRGWIAWPSPEYEQVIRPTDWNEFLLKVEG
NHMVAILNGIAIIDFTDPTPKSFDGYIALQLHSGGEGNMRFKDIYLRDMSAR

Sequences:

>Translated_212_residues
MLRMLLVMLSIPVWIAAQVPKNRAPYPNEQWVQLFNGKDLSGWVNVGHEKWTVEDGTIHGQGVTKEYGYLRTEKQYKDFW
LSIRFKCEDDGNSGVYFHTDFKPGTVDVSKGMQFEIDRTLNHHNGGLYGDGRGWIAWPSPEYEQVIRPTDWNEFLLKVEG
NHMVAILNGIAIIDFTDPTPKSFDGYIALQLHSGGEGNMRFKDIYLRDMSAR
>Mature_212_residues
MLRMLLVMLSIPVWIAAQVPKNRAPYPNEQWVQLFNGKDLSGWVNVGHEKWTVEDGTIHGQGVTKEYGYLRTEKQYKDFW
LSIRFKCEDDGNSGVYFHTDFKPGTVDVSKGMQFEIDRTLNHHNGGLYGDGRGWIAWPSPEYEQVIRPTDWNEFLLKVEG
NHMVAILNGIAIIDFTDPTPKSFDGYIALQLHSGGEGNMRFKDIYLRDMSAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24345; Mature: 24345

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRMLLVMLSIPVWIAAQVPKNRAPYPNEQWVQLFNGKDLSGWVNVGHEKWTVEDGTIHG
CHHHHHHHHHCCEEEEEECCCCCCCCCCHHHEEEECCCCCCCEEECCCEEEEEECCEEEC
QGVTKEYGYLRTEKQYKDFWLSIRFKCEDDGNSGVYFHTDFKPGTVDVSKGMQFEIDRTL
CCCCCCCCCEECCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCEEECCCCCEEEEEECC
NHHNGGLYGDGRGWIAWPSPEYEQVIRPTDWNEFLLKVEGNHMVAILNGIAIIDFTDPTP
CCCCCCEEECCCEEEECCCCCHHHHCCCCCCCEEEEEECCCEEEEEEECEEEEECCCCCC
KSFDGYIALQLHSGGEGNMRFKDIYLRDMSAR
CCCCCEEEEEEECCCCCCEEEEEEEEEECCCC
>Mature Secondary Structure
MLRMLLVMLSIPVWIAAQVPKNRAPYPNEQWVQLFNGKDLSGWVNVGHEKWTVEDGTIHG
CHHHHHHHHHCCEEEEEECCCCCCCCCCHHHEEEECCCCCCCEEECCCEEEEEECCEEEC
QGVTKEYGYLRTEKQYKDFWLSIRFKCEDDGNSGVYFHTDFKPGTVDVSKGMQFEIDRTL
CCCCCCCCCEECCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCEEECCCCCEEEEEECC
NHHNGGLYGDGRGWIAWPSPEYEQVIRPTDWNEFLLKVEGNHMVAILNGIAIIDFTDPTP
CCCCCCEEECCCEEEECCCCCHHHHCCCCCCCEEEEEECCCEEEEEEECEEEEECCCCCC
KSFDGYIALQLHSGGEGNMRFKDIYLRDMSAR
CCCCCEEEEEEECCCCCCEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA