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The map label for this gene is 116625203

Identifier: 116625203

GI number: 116625203

Start: 7687906

End: 7689525

Strand: Direct

Name: 116625203

Synonym: Acid_6148

Alternate gene names: NA

Gene position: 7687906-7689525 (Clockwise)

Preceding gene: 116625197

Following gene: 116625204

Centisome position: 77.14

GC content: 63.52

Gene sequence:

>1620_bases
ATGCCGAATCCGTTATGGAACAGACTAACTTCGCGGGGACTAAGCCGTCGCGCGCTCTTCCAACGGGGCAGCGTGCTGGC
CGCTGCGCACGCCTTGGGGACAGGCATGGAACAGACCGCGTCCGCGGACGCTATGCAGCCCGGCAATATCTATCGCTCGA
TCGGAGTGCGCCCGGTAATCAATGCCCGCGGCACTTTCACTATCATCACCGGGTCCACCACGCTCCCGGAAGTCAAGAGT
GCGATGGAAGAAGCCTCGCGCAGTTTCGTCAACATGGACGAACTCATGGAAGGCGTCGGCAAGCGGCTCGCCGAACTTAG
CGGCGCGGAGTGGGGCATCGTCACCGCGGGCTGCTGTGCCGCGATCACGCATTTTACCGCCTCGACGATCGCGGGCGGCA
ACCCGGAGCGCATGCAGCGCCTGCCGAATCTCAGCGGTTTGAAGAGCGAAGTCATCGTCCCGGCATACTCGCACAACGTC
TACGACCACGCAGTCCGCATGCTCGGCACAAAGCTCATAGTGGTCCACGATAGAGCCGACCTGGAAGGCGCGTTCAATGA
GCGCACCGCCATGGTCTATATTCTCGCGGGGCCCGGCGACGATGGTCCGCTCGGCACTCAGGCGATTTCTGAAGTCGCCC
GCCGCAAGAACGTGCCCGTCCTGGTGGACGCAGCGGCGGAGATCCTGACCCTCAAACCCAACGTCCATCTGCAGCGCGGC
GCGAGCGCCGTGGCATACAGCGGGGGTAAATGCATTCGGGGGCCGCAGGCGGCCGGACTTCTCCTCGGCGAAAAGAGCCT
GATCCAGGGCGCATGGATTAACAGCGCTCCGCACCACGCTTTCGGCCGCTCCGTGAAGGTCGGCAAGGAAGAAGTTATGG
GTATGCTGGCCGCGGTGGAGATGTGGGTGAAGCGCGATCACAAGGCCGAGTGGAAGCAGTGGGAAGGCTGGCTGGACCAG
ATCGCCACCTCCGTGAAGCGCGTGGACGGTGTGACCACACAACTGCGTCAACCGAGTGCGGATCTCTCCAACCGCACGCC
CTCGCTCGTGATCACGTGGGATGGCGCCAAACTCGGCATCACGGGGCAGGAAGCCGCGAAGCATTTACTGGATACCGACC
CGCGCATCGTGGTAGCCGGATCCAGCGGAGTTCGCGGCGGCAACATGGCGAGTTCGGTGTCGGTGGTCCCTTACCAGATG
ACTCCGGGCGATGAGAAGGTGGTGGCCGACCGGCTGTACGCGACTCTCTCCAAGCCGCCGAAGTTCGATACGCCCGCTCA
ACCCGAGGGCCAGCCGACTGCCGTCGCCGGGCAGTGGGAACTCCACATGGAATTCGTGCGCGGCTCGGTGAACCACAAGC
TGGTGCTGGAGCAGGATGGCGGCAAACTGATGGGCACCCACGAGGGCGAATTCGCCGCGGGCGATCTCACCGGCACGGTT
GCGGGCAACAGCGTTCGCTTCCAAAGCGGATACGGCACGGAAGGTACGCGCGTGTCCTATCAGTTCACGGGCAAACTGGA
AGGCGACAAGATGTCCGGCACGGTTTCGCTCGGCGAGTATGGCGATGCCAGTTGGACCGCCGAACGCCATCAATATCGCA
CGGGTACACGCCGCGGATAG

Upstream 100 bases:

>100_bases
GCTGAAAGTCTATACCGGGATCCCCCATGGGTCAATTGCCAAGTGTTGCTTCGCAGTAAGAGCTGTGATAGATTCCAGCA
AACAGAGAGGCGCACCCACT

Downstream 100 bases:

>100_bases
ATGTCATTGAAAGGGAGCAAACGAATGAGCACGACGAATCGACGCAAGTTTCTGGGCCGCGGTGTTGCCGCCGCAGCCGC
CGCCTCAGCGGCAGCCGTTC

Product: selenocysteine synthase-like protein

Products: L-selenocysteinyl-tRNA(Sec); H2O; phosphate

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MPNPLWNRLTSRGLSRRALFQRGSVLAAAHALGTGMEQTASADAMQPGNIYRSIGVRPVINARGTFTIITGSTTLPEVKS
AMEEASRSFVNMDELMEGVGKRLAELSGAEWGIVTAGCCAAITHFTASTIAGGNPERMQRLPNLSGLKSEVIVPAYSHNV
YDHAVRMLGTKLIVVHDRADLEGAFNERTAMVYILAGPGDDGPLGTQAISEVARRKNVPVLVDAAAEILTLKPNVHLQRG
ASAVAYSGGKCIRGPQAAGLLLGEKSLIQGAWINSAPHHAFGRSVKVGKEEVMGMLAAVEMWVKRDHKAEWKQWEGWLDQ
IATSVKRVDGVTTQLRQPSADLSNRTPSLVITWDGAKLGITGQEAAKHLLDTDPRIVVAGSSGVRGGNMASSVSVVPYQM
TPGDEKVVADRLYATLSKPPKFDTPAQPEGQPTAVAGQWELHMEFVRGSVNHKLVLEQDGGKLMGTHEGEFAAGDLTGTV
AGNSVRFQSGYGTEGTRVSYQFTGKLEGDKMSGTVSLGEYGDASWTAERHQYRTGTRRG

Sequences:

>Translated_539_residues
MPNPLWNRLTSRGLSRRALFQRGSVLAAAHALGTGMEQTASADAMQPGNIYRSIGVRPVINARGTFTIITGSTTLPEVKS
AMEEASRSFVNMDELMEGVGKRLAELSGAEWGIVTAGCCAAITHFTASTIAGGNPERMQRLPNLSGLKSEVIVPAYSHNV
YDHAVRMLGTKLIVVHDRADLEGAFNERTAMVYILAGPGDDGPLGTQAISEVARRKNVPVLVDAAAEILTLKPNVHLQRG
ASAVAYSGGKCIRGPQAAGLLLGEKSLIQGAWINSAPHHAFGRSVKVGKEEVMGMLAAVEMWVKRDHKAEWKQWEGWLDQ
IATSVKRVDGVTTQLRQPSADLSNRTPSLVITWDGAKLGITGQEAAKHLLDTDPRIVVAGSSGVRGGNMASSVSVVPYQM
TPGDEKVVADRLYATLSKPPKFDTPAQPEGQPTAVAGQWELHMEFVRGSVNHKLVLEQDGGKLMGTHEGEFAAGDLTGTV
AGNSVRFQSGYGTEGTRVSYQFTGKLEGDKMSGTVSLGEYGDASWTAERHQYRTGTRRG
>Mature_538_residues
PNPLWNRLTSRGLSRRALFQRGSVLAAAHALGTGMEQTASADAMQPGNIYRSIGVRPVINARGTFTIITGSTTLPEVKSA
MEEASRSFVNMDELMEGVGKRLAELSGAEWGIVTAGCCAAITHFTASTIAGGNPERMQRLPNLSGLKSEVIVPAYSHNVY
DHAVRMLGTKLIVVHDRADLEGAFNERTAMVYILAGPGDDGPLGTQAISEVARRKNVPVLVDAAAEILTLKPNVHLQRGA
SAVAYSGGKCIRGPQAAGLLLGEKSLIQGAWINSAPHHAFGRSVKVGKEEVMGMLAAVEMWVKRDHKAEWKQWEGWLDQI
ATSVKRVDGVTTQLRQPSADLSNRTPSLVITWDGAKLGITGQEAAKHLLDTDPRIVVAGSSGVRGGNMASSVSVVPYQMT
PGDEKVVADRLYATLSKPPKFDTPAQPEGQPTAVAGQWELHMEFVRGSVNHKLVLEQDGGKLMGTHEGEFAAGDLTGTVA
GNSVRFQSGYGTEGTRVSYQFTGKLEGDKMSGTVSLGEYGDASWTAERHQYRTGTRRG

Specific function: Unknown

COG id: COG1921

COG function: function code E; Selenocysteine synthase [seryl-tRNASer selenium transferase]

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000277
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR018319 [H]

Pfam domain/function: PF03841 SelA [H]

EC number: 2.9.1.1

Molecular weight: Translated: 57665; Mature: 57534

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNPLWNRLTSRGLSRRALFQRGSVLAAAHALGTGMEQTASADAMQPGNIYRSIGVRPVI
CCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHCCCCEEE
NARGTFTIITGSTTLPEVKSAMEEASRSFVNMDELMEGVGKRLAELSGAEWGIVTAGCCA
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHH
AITHFTASTIAGGNPERMQRLPNLSGLKSEVIVPAYSHNVYDHAVRMLGTKLIVVHDRAD
HHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCEEEEEECCCC
LEGAFNERTAMVYILAGPGDDGPLGTQAISEVARRKNVPVLVDAAAEILTLKPNVHLQRG
CCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCEEECC
ASAVAYSGGKCIRGPQAAGLLLGEKSLIQGAWINSAPHHAFGRSVKVGKEEVMGMLAAVE
CCEEEECCCCEECCCCCCEEEECCHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH
MWVKRDHKAEWKQWEGWLDQIATSVKRVDGVTTQLRQPSADLSNRTPSLVITWDGAKLGI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEECCCEECC
TGQEAAKHLLDTDPRIVVAGSSGVRGGNMASSVSVVPYQMTPGDEKVVADRLYATLSKPP
CHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCC
KFDTPAQPEGQPTAVAGQWELHMEFVRGSVNHKLVLEQDGGKLMGTHEGEFAAGDLTGTV
CCCCCCCCCCCCCEEECCHHEEHHHHCCCCCCEEEEECCCCEEECCCCCCEECCCEEEEE
AGNSVRFQSGYGTEGTRVSYQFTGKLEGDKMSGTVSLGEYGDASWTAERHQYRTGTRRG
CCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
PNPLWNRLTSRGLSRRALFQRGSVLAAAHALGTGMEQTASADAMQPGNIYRSIGVRPVI
CCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHCCCCEEE
NARGTFTIITGSTTLPEVKSAMEEASRSFVNMDELMEGVGKRLAELSGAEWGIVTAGCCA
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHH
AITHFTASTIAGGNPERMQRLPNLSGLKSEVIVPAYSHNVYDHAVRMLGTKLIVVHDRAD
HHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCEEEEEECCCC
LEGAFNERTAMVYILAGPGDDGPLGTQAISEVARRKNVPVLVDAAAEILTLKPNVHLQRG
CCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCEEECC
ASAVAYSGGKCIRGPQAAGLLLGEKSLIQGAWINSAPHHAFGRSVKVGKEEVMGMLAAVE
CCEEEECCCCEECCCCCCEEEECCHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH
MWVKRDHKAEWKQWEGWLDQIATSVKRVDGVTTQLRQPSADLSNRTPSLVITWDGAKLGI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEECCCEECC
TGQEAAKHLLDTDPRIVVAGSSGVRGGNMASSVSVVPYQMTPGDEKVVADRLYATLSKPP
CHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCC
KFDTPAQPEGQPTAVAGQWELHMEFVRGSVNHKLVLEQDGGKLMGTHEGEFAAGDLTGTV
CCCCCCCCCCCCCEEECCHHEEHHHHCCCCCCEEEEECCCCEEECCCCCCEECCCEEEEE
AGNSVRFQSGYGTEGTRVSYQFTGKLEGDKMSGTVSLGEYGDASWTAERHQYRTGTRRG
CCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-seryl-tRNA(Sec); selenophosphate

Specific reaction: L-seryl-tRNA(Sec) + selenophosphate = L-selenocysteinyl-tRNA(Sec) + H2O + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]