| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625053
Identifier: 116625053
GI number: 116625053
Start: 7507574
End: 7507981
Strand: Direct
Name: 116625053
Synonym: Acid_5983
Alternate gene names: NA
Gene position: 7507574-7507981 (Clockwise)
Preceding gene: 116625049
Following gene: 116625056
Centisome position: 75.33
GC content: 59.56
Gene sequence:
>408_bases ATGAAGGATCGCCCCGTCATGCCGATACTTCGTCTGGCTTATACGACGCTTTTTCTGATTGCTTTGATCGCAATTTTTGT GCTGTGGGCCCAGGTGGGCGGACAAAGTCATCTGGATCTGCTGCCCTGGTTCGTCAAACTGGGACTGGGGGTGGCGGCGG CCTGGTCGATTGTGCGGGCGACCGCCGCGGCGGTGGCCGGGGAGCGCGGCTGGAACGGACAGAGCATGCGCTGGCTGGCC ATCACGCTGGCCGTGATGTTCCTATGCGGAATGGCAACCTACTACGCACACATGAATCTGGAAGACGGCGACGAGGAAGA CCAGCAGCAGGATACGACGGTTTCGCGACTGATCGGGATGGGACCGGGCAAGATAGCCAATGTTATCGGGCCGGTAAAGG CAACTTAG
Upstream 100 bases:
>100_bases GAATCCATCGCCAGGCGGAACGCGTTTTGGAAATTATGCCAGGAGCGGGCTGCCCCCGAGCCGTTGTGAGCCATGTGTCT TTCCTTCAGGATAACGTAAG
Downstream 100 bases:
>100_bases AACCGGCGAGCGACTTGAGTATGTCGAGATTGCGCCGGTCGTCGCCGGGCTCGTCTACCGGGGTCTCGAGAATGAAGGGC TTGCGCCGCAGTTTGGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKDRPVMPILRLAYTTLFLIALIAIFVLWAQVGGQSHLDLLPWFVKLGLGVAAAWSIVRATAAAVAGERGWNGQSMRWLA ITLAVMFLCGMATYYAHMNLEDGDEEDQQQDTTVSRLIGMGPGKIANVIGPVKAT
Sequences:
>Translated_135_residues MKDRPVMPILRLAYTTLFLIALIAIFVLWAQVGGQSHLDLLPWFVKLGLGVAAAWSIVRATAAAVAGERGWNGQSMRWLA ITLAVMFLCGMATYYAHMNLEDGDEEDQQQDTTVSRLIGMGPGKIANVIGPVKAT >Mature_135_residues MKDRPVMPILRLAYTTLFLIALIAIFVLWAQVGGQSHLDLLPWFVKLGLGVAAAWSIVRATAAAVAGERGWNGQSMRWLA ITLAVMFLCGMATYYAHMNLEDGDEEDQQQDTTVSRLIGMGPGKIANVIGPVKAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14674; Mature: 14674
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDRPVMPILRLAYTTLFLIALIAIFVLWAQVGGQSHLDLLPWFVKLGLGVAAAWSIVRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH TAAAVAGERGWNGQSMRWLAITLAVMFLCGMATYYAHMNLEDGDEEDQQQDTTVSRLIGM HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC GPGKIANVIGPVKAT CCHHHHHHHCCCCCC >Mature Secondary Structure MKDRPVMPILRLAYTTLFLIALIAIFVLWAQVGGQSHLDLLPWFVKLGLGVAAAWSIVRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH TAAAVAGERGWNGQSMRWLAITLAVMFLCGMATYYAHMNLEDGDEEDQQQDTTVSRLIGM HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC GPGKIANVIGPVKAT CCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA