| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is quiP [H]
Identifier: 116625049
GI number: 116625049
Start: 7500661
End: 7502856
Strand: Direct
Name: quiP [H]
Synonym: Acid_5979
Alternate gene names: 116625049
Gene position: 7500661-7502856 (Clockwise)
Preceding gene: 116625044
Following gene: 116625053
Centisome position: 75.27
GC content: 65.94
Gene sequence:
>2196_bases ATGAAGCGCGTATGCAGCGTACTCTTCCTCTGCTCGGGCCTGCTCTGCGCAGCCCCGATCCGCACCCCTGGACTGCGGAA GCCCGTCGAAATCCTGCGGGATCGATGGGGCGTGCCGCACATTTACGCCGCCACCGTTCACGACCTTTTCTTCGCACAGG GCTACATCACCGCCACCGATCGCCTTTTCCAGATCGACCTGTGGCGGCGGGTCGGGTCGGGCAAACTCGCCGAGGTCATG GGTCCCGCGTACATCGATCGCGACCGGCTGGCGCGAGCGGTAAACTATCGCGGCGATTGGGCGGCGGAGTGGGCCGCCTA CGGCAGCGACGCGCGCGAGATCGTCACGGCGTTCACGGAAGGCGTGAATGCGTACATCCATTCGCTGGGCGCCAACCTGC CGCGGGAGTTCAAAATCGCGGGCTACGCGCCGGGCTTGTGGGTTCCCGAGGATTGCCTGAGCCGTGTCGCCGGCCTCACC ATGACTGGCAACCTGACGCGCGAAGTGACCCATGCCGAGGATATACGGCGATACGGAATCGAGCGCACGCTCCAGTTCAC TCGAATCGAACCGCACGCCGCTATGACAGTGCCCGCCGGCCTCGACCTTGCGGCGATCACGGCGGACATTCTGCGCACCT ACCGGCAGACCGTCGGACCGGTGCGGTTGACGACCGAGCAGGGCAGCAATAACTGGGTGGTGGATGGAACGCTCACCGCG ACGGGCCGCCCGATTCTGGCCAACGATCCGCACCGGCCGGTGCAGCTTCCCTCGCTCCGGAAAACGGTCCACCTGAACGG GCCGGGGTGGAACGCGATCGGGTCGGGCGAGCCGGGGCTTCCCGGGATCGCGCTCGGCCACAACGATAGCGTGGCCTTCG GTTTTACGATCGTGGGCATCGATCAGCAGGACTTGTACGTGGAGAGCGTCAACCCCTCAAACGCCGCGCAGTATCGCTAC AGGGGCGCGTGGAAGGACTTCGAGACGCGACAACAGCAGCTGGCCCTGAAGGGCGAAGCGGCGCGGACGATTACGCTGCG GTACACGGTGCATGGTCCGGTGATCGCGGAGGACGGCGCCGCGCATCGCGTGTATGCGCTGCGCTGGGTGGGCAGCGAAC CGGGGACGGCCGGCTATCTGGCGGGCCTCTCGCTGGCGCGCGCCCGCGATTGGACCGAATTTCGCGCCGCGATGGCGCGC TACCGCGTCCCTTCGGAGAACCTGGTCTACGCCGATACCAAGGGCAATATCGGCTGGCAGGTCGGCGGCCTCACGCCGAT CCGGGACGGTTGGAATGGCCTGCTACCCGTTCCCGGGGATGAGGGCCGATACGAATGGACCGGTTTCAGGAAGCCGGAGG AACTGCCGTTCGAGTTCAATCCGGCGCGGCACTACATCGCCACCGCGAATCACAACATCCTGCCCGAGGGGTACAAGATC CCGATCGGCTACGACGGGTGGGCGCTGCCTTTCCGGGTCACGCGCATTCGCGAGATGCTGGCGGCGGGCAAGAAGTTCGA TATTGCCGATTTCGTGCGCATGCAGCAGGACGTCACATCGCTGCCGGCGCAGCGCTTCCAGGCGGCGGTGCGCGGCTGGC ATCCGGCGGAGGGGACCGCGACGGCGCGCGCCCTCGCGGAGGTATTGCAATGGCACGCGGTGCTGGCGGCAAACTCGCAC GCCGCGCTGCTCTACGAATTGTGGATGTCGAAACTGCCGTCCGCGCTGTTTGGGGAGATGGCGGCGAAAGCCGATCTCGA CATGCAGCTTCGCAAACTCGAGGCCGGCGTGGATCCGGCGATTCTTGAGAAGACGCTGGAGGGAGCGCTCGCCGAGGTGG ATCGGCGCAAGGTGACGACCTGGGGCGCGCTGCACCAACTCACGCTGGCGCACCCGCTCGGTAAAGCCGAATTCCAGCTC GGCCCCGTGCCGCGGCCCGGCGATGCCAACACGGTAAACGCCACCAGCGGAACCAACTTCCGGCAGACCAATGGCGCCTC CTGGCGCGAGGTGCTCGACGTGGGCGATTGGGACCGGTCGGTGATGACCAACGTCCCCGGCGAATCCGGCAATCCCGGCA GTTCGCATTATTCGGATCTGCTGGCCGATTGGGCGGCGGGGCGATATCATCCACTGCCTTTTTCGCGCAAAGCAGTCGAG GCAGCCACCGAAGAACGCATCGAACTAATACCGTGA
Upstream 100 bases:
>100_bases TGTGATTTTCCGGTCCAAAGTACGGCCGGCCTCCTCTTGTGTATACGATATCACCGGATGTAATGGATTCAACATTATTA GCCCGTGTTATCTTTGGCCA
Downstream 100 bases:
>100_bases AGTGTGGCTGCTAAGGTGTGGATCCGGATCTGATACGGCCAAAATGGGAAATTCCTACTGGAGCTTGGCTTCCAGTTCGG CCCAGCGGGCGTAGAGCTGG
Product: penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Quorum signal utilization and inactivation protein; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 731; Mature: 731
Protein sequence:
>731_residues MKRVCSVLFLCSGLLCAAPIRTPGLRKPVEILRDRWGVPHIYAATVHDLFFAQGYITATDRLFQIDLWRRVGSGKLAEVM GPAYIDRDRLARAVNYRGDWAAEWAAYGSDAREIVTAFTEGVNAYIHSLGANLPREFKIAGYAPGLWVPEDCLSRVAGLT MTGNLTREVTHAEDIRRYGIERTLQFTRIEPHAAMTVPAGLDLAAITADILRTYRQTVGPVRLTTEQGSNNWVVDGTLTA TGRPILANDPHRPVQLPSLRKTVHLNGPGWNAIGSGEPGLPGIALGHNDSVAFGFTIVGIDQQDLYVESVNPSNAAQYRY RGAWKDFETRQQQLALKGEAARTITLRYTVHGPVIAEDGAAHRVYALRWVGSEPGTAGYLAGLSLARARDWTEFRAAMAR YRVPSENLVYADTKGNIGWQVGGLTPIRDGWNGLLPVPGDEGRYEWTGFRKPEELPFEFNPARHYIATANHNILPEGYKI PIGYDGWALPFRVTRIREMLAAGKKFDIADFVRMQQDVTSLPAQRFQAAVRGWHPAEGTATARALAEVLQWHAVLAANSH AALLYELWMSKLPSALFGEMAAKADLDMQLRKLEAGVDPAILEKTLEGALAEVDRRKVTTWGALHQLTLAHPLGKAEFQL GPVPRPGDANTVNATSGTNFRQTNGASWREVLDVGDWDRSVMTNVPGESGNPGSSHYSDLLADWAAGRYHPLPFSRKAVE AATEERIELIP
Sequences:
>Translated_731_residues MKRVCSVLFLCSGLLCAAPIRTPGLRKPVEILRDRWGVPHIYAATVHDLFFAQGYITATDRLFQIDLWRRVGSGKLAEVM GPAYIDRDRLARAVNYRGDWAAEWAAYGSDAREIVTAFTEGVNAYIHSLGANLPREFKIAGYAPGLWVPEDCLSRVAGLT MTGNLTREVTHAEDIRRYGIERTLQFTRIEPHAAMTVPAGLDLAAITADILRTYRQTVGPVRLTTEQGSNNWVVDGTLTA TGRPILANDPHRPVQLPSLRKTVHLNGPGWNAIGSGEPGLPGIALGHNDSVAFGFTIVGIDQQDLYVESVNPSNAAQYRY RGAWKDFETRQQQLALKGEAARTITLRYTVHGPVIAEDGAAHRVYALRWVGSEPGTAGYLAGLSLARARDWTEFRAAMAR YRVPSENLVYADTKGNIGWQVGGLTPIRDGWNGLLPVPGDEGRYEWTGFRKPEELPFEFNPARHYIATANHNILPEGYKI PIGYDGWALPFRVTRIREMLAAGKKFDIADFVRMQQDVTSLPAQRFQAAVRGWHPAEGTATARALAEVLQWHAVLAANSH AALLYELWMSKLPSALFGEMAAKADLDMQLRKLEAGVDPAILEKTLEGALAEVDRRKVTTWGALHQLTLAHPLGKAEFQL GPVPRPGDANTVNATSGTNFRQTNGASWREVLDVGDWDRSVMTNVPGESGNPGSSHYSDLLADWAAGRYHPLPFSRKAVE AATEERIELIP >Mature_731_residues MKRVCSVLFLCSGLLCAAPIRTPGLRKPVEILRDRWGVPHIYAATVHDLFFAQGYITATDRLFQIDLWRRVGSGKLAEVM GPAYIDRDRLARAVNYRGDWAAEWAAYGSDAREIVTAFTEGVNAYIHSLGANLPREFKIAGYAPGLWVPEDCLSRVAGLT MTGNLTREVTHAEDIRRYGIERTLQFTRIEPHAAMTVPAGLDLAAITADILRTYRQTVGPVRLTTEQGSNNWVVDGTLTA TGRPILANDPHRPVQLPSLRKTVHLNGPGWNAIGSGEPGLPGIALGHNDSVAFGFTIVGIDQQDLYVESVNPSNAAQYRY RGAWKDFETRQQQLALKGEAARTITLRYTVHGPVIAEDGAAHRVYALRWVGSEPGTAGYLAGLSLARARDWTEFRAAMAR YRVPSENLVYADTKGNIGWQVGGLTPIRDGWNGLLPVPGDEGRYEWTGFRKPEELPFEFNPARHYIATANHNILPEGYKI PIGYDGWALPFRVTRIREMLAAGKKFDIADFVRMQQDVTSLPAQRFQAAVRGWHPAEGTATARALAEVLQWHAVLAANSH AALLYELWMSKLPSALFGEMAAKADLDMQLRKLEAGVDPAILEKTLEGALAEVDRRKVTTWGALHQLTLAHPLGKAEFQL GPVPRPGDANTVNATSGTNFRQTNGASWREVLDVGDWDRSVMTNVPGESGNPGSSHYSDLLADWAAGRYHPLPFSRKAVE AATEERIELIP
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 80515; Mature: 80515
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVCSVLFLCSGLLCAAPIRTPGLRKPVEILRDRWGVPHIYAATVHDLFFAQGYITATD CHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHCCEEEECC RLFQIDLWRRVGSGKLAEVMGPAYIDRDRLARAVNYRGDWAAEWAAYGSDAREIVTAFTE EEEEEEHHHHCCCCCHHHHHCCHHCCHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHH GVNAYIHSLGANLPREFKIAGYAPGLWVPEDCLSRVAGLTMTGNLTREVTHAEDIRRYGI HHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHCEEEECCCHHHHHHHHHHHHHCH ERTLQFTRIEPHAAMTVPAGLDLAAITADILRTYRQTVGPVRLTTEQGSNNWVVDGTLTA HHCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEE TGRPILANDPHRPVQLPSLRKTVHLNGPGWNAIGSGEPGLPGIALGHNDSVAFGFTIVGI CCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEE DQQDLYVESVNPSNAAQYRYRGAWKDFETRQQQLALKGEAARTITLRYTVHGPVIAEDGA CCCCCEEEECCCCCCHHEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCEEECCCC AHRVYALRWVGSEPGTAGYLAGLSLARARDWTEFRAAMARYRVPSENLVYADTKGNIGWQ CCEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEE VGGLTPIRDGWNGLLPVPGDEGRYEWTGFRKPEELPFEFNPARHYIATANHNILPEGYKI ECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCEEEEECCCCCCCCCCEE PIGYDGWALPFRVTRIREMLAAGKKFDIADFVRMQQDVTSLPAQRFQAAVRGWHPAEGTA ECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHH TARALAEVLQWHAVLAANSHAALLYELWMSKLPSALFGEMAAKADLDMQLRKLEAGVDPA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHH ILEKTLEGALAEVDRRKVTTWGALHQLTLAHPLGKAEFQLGPVPRPGDANTVNATSGTNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEECCCCCCC RQTNGASWREVLDVGDWDRSVMTNVPGESGNPGSSHYSDLLADWAAGRYHPLPFSRKAVE CCCCCCCHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH AATEERIELIP HHHHHHHCCCC >Mature Secondary Structure MKRVCSVLFLCSGLLCAAPIRTPGLRKPVEILRDRWGVPHIYAATVHDLFFAQGYITATD CHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHCCEEEECC RLFQIDLWRRVGSGKLAEVMGPAYIDRDRLARAVNYRGDWAAEWAAYGSDAREIVTAFTE EEEEEEHHHHCCCCCHHHHHCCHHCCHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHH GVNAYIHSLGANLPREFKIAGYAPGLWVPEDCLSRVAGLTMTGNLTREVTHAEDIRRYGI HHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHCEEEECCCHHHHHHHHHHHHHCH ERTLQFTRIEPHAAMTVPAGLDLAAITADILRTYRQTVGPVRLTTEQGSNNWVVDGTLTA HHCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEE TGRPILANDPHRPVQLPSLRKTVHLNGPGWNAIGSGEPGLPGIALGHNDSVAFGFTIVGI CCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEE DQQDLYVESVNPSNAAQYRYRGAWKDFETRQQQLALKGEAARTITLRYTVHGPVIAEDGA CCCCCEEEECCCCCCHHEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCEEECCCC AHRVYALRWVGSEPGTAGYLAGLSLARARDWTEFRAAMARYRVPSENLVYADTKGNIGWQ CCEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEE VGGLTPIRDGWNGLLPVPGDEGRYEWTGFRKPEELPFEFNPARHYIATANHNILPEGYKI ECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCEEEEECCCCCCCCCCEE PIGYDGWALPFRVTRIREMLAAGKKFDIADFVRMQQDVTSLPAQRFQAAVRGWHPAEGTA ECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHH TARALAEVLQWHAVLAANSHAALLYELWMSKLPSALFGEMAAKADLDMQLRKLEAGVDPA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHH ILEKTLEGALAEVDRRKVTTWGALHQLTLAHPLGKAEFQLGPVPRPGDANTVNATSGTNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEECCCCCCC RQTNGASWREVLDVGDWDRSVMTNVPGESGNPGSSHYSDLLADWAAGRYHPLPFSRKAVE CCCCCCCHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH AATEERIELIP HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]