| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625041
Identifier: 116625041
GI number: 116625041
Start: 7489263
End: 7489850
Strand: Reverse
Name: 116625041
Synonym: Acid_5971
Alternate gene names: NA
Gene position: 7489850-7489263 (Counterclockwise)
Preceding gene: 116625042
Following gene: 116625038
Centisome position: 75.16
GC content: 60.71
Gene sequence:
>588_bases ATGAAAAAACTAATGGTTTCCGCAGCCGCCCTTTCGGTGGCATTGCTGATCCCGGTTTACGCCCAGGAAAGGGGCCATGA GCGCGGACAGGAGCAACATGGTGGTCGCGTTGGGGGCGGGTATGTTCCGCCGCACGGCCCGGCGCCGCGGGCGCAGCAGC CTCAACACGAAGCGCAGCAGCCTCAACATGAAATGCAGCAGCGCGACCGTGCCGAGCCCAACCATAACTTTCGCGATGTG CCCAGTCACCCCGAAGCACCGCATGTCCACCCGAACGGCGAATGGGTCGGCCACGATAACTTCCGCCGCGGCGATGCCCG CCTACATGTGGATCGTCCGTTCGAACATGGCCGCTTCGCGCTCGGCTTCGGACCCAGTCACGTATTCCATATCCAGGGCG GCAATCGCGACCGCTTCTGGTTCAACGGCGCCTATTTCAGAGTCGCGCCTTTCGATTACGCCTACGTCGCCGATTGGGAT TGGAATGGCGATCCCATCGTGATCTACGAAGATCCCGACGATCCAGGCTGGTATCTCGCCTATAACCCCAGGCTCGGAAC TTACGTGCACGTGATGTACGGACAATAG
Upstream 100 bases:
>100_bases GTCGCTACCGATTTTCCGCTGCCCTCGATTTCCGACGCGATTTAGGGTCCCGGCACACACTGGCCACGCATGTGCCCTCC GTCACTGCGGAGAACGAAGC
Downstream 100 bases:
>100_bases TCTGCTTACCGCACGCTGAATAGCACATTCGCAGGCGAAGTCTTTCCGGCAGAGTTGGCGATGATCGGCTGATCGCCGCT CTGCGCTCCGTTAGGTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKKLMVSAAALSVALLIPVYAQERGHERGQEQHGGRVGGGYVPPHGPAPRAQQPQHEAQQPQHEMQQRDRAEPNHNFRDV PSHPEAPHVHPNGEWVGHDNFRRGDARLHVDRPFEHGRFALGFGPSHVFHIQGGNRDRFWFNGAYFRVAPFDYAYVADWD WNGDPIVIYEDPDDPGWYLAYNPRLGTYVHVMYGQ
Sequences:
>Translated_195_residues MKKLMVSAAALSVALLIPVYAQERGHERGQEQHGGRVGGGYVPPHGPAPRAQQPQHEAQQPQHEMQQRDRAEPNHNFRDV PSHPEAPHVHPNGEWVGHDNFRRGDARLHVDRPFEHGRFALGFGPSHVFHIQGGNRDRFWFNGAYFRVAPFDYAYVADWD WNGDPIVIYEDPDDPGWYLAYNPRLGTYVHVMYGQ >Mature_195_residues MKKLMVSAAALSVALLIPVYAQERGHERGQEQHGGRVGGGYVPPHGPAPRAQQPQHEAQQPQHEMQQRDRAEPNHNFRDV PSHPEAPHVHPNGEWVGHDNFRRGDARLHVDRPFEHGRFALGFGPSHVFHIQGGNRDRFWFNGAYFRVAPFDYAYVADWD WNGDPIVIYEDPDDPGWYLAYNPRLGTYVHVMYGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22302; Mature: 22302
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLMVSAAALSVALLIPVYAQERGHERGQEQHGGRVGGGYVPPHGPAPRAQQPQHEAQQ CCHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHCCCEECCCCCCCCCCCCCCCCCHHHHCC PQHEMQQRDRAEPNHNFRDVPSHPEAPHVHPNGEWVGHDNFRRGDARLHVDRPFEHGRFA HHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCCCCCEEEEECCCCCCCEEE LGFGPSHVFHIQGGNRDRFWFNGAYFRVAPFDYAYVADWDWNGDPIVIYEDPDDPGWYLA EEECCCEEEEEECCCCCCEEECCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCEEEE YNPRLGTYVHVMYGQ ECCCCCEEEEEEECC >Mature Secondary Structure MKKLMVSAAALSVALLIPVYAQERGHERGQEQHGGRVGGGYVPPHGPAPRAQQPQHEAQQ CCHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHCCCEECCCCCCCCCCCCCCCCCHHHHCC PQHEMQQRDRAEPNHNFRDVPSHPEAPHVHPNGEWVGHDNFRRGDARLHVDRPFEHGRFA HHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCCCCCEEEEECCCCCCCEEE LGFGPSHVFHIQGGNRDRFWFNGAYFRVAPFDYAYVADWDWNGDPIVIYEDPDDPGWYLA EEECCCEEEEEECCCCCCEEECCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCEEEE YNPRLGTYVHVMYGQ ECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA