| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624792
Identifier: 116624792
GI number: 116624792
Start: 7164307
End: 7164762
Strand: Reverse
Name: 116624792
Synonym: Acid_5716
Alternate gene names: NA
Gene position: 7164762-7164307 (Counterclockwise)
Preceding gene: 116624793
Following gene: 116624791
Centisome position: 71.89
GC content: 62.5
Gene sequence:
>456_bases ATGAGTGAGGAACTGTTTACCGAACTGCCAGAGGCCGCCCGGCTGCTGGCGGAGAGCCTGGATCCGGTGGCGCCCGCGCC CGGCCTGAAGGCGCGGCTGATGACGCGGGTGGCGCAGTTCGAAGAGCTCAAGCCGGCGGCCGACATTCGCCGTGATGAAG GCGATTGGATCTCCGAGATCCCGGGGATCGCTATGAAGACGCTGTACACTGACGTCGCCAAGCGCACTTCCACGGTGCTG TTGCGGATGGATCCCGGGGTTACCTACCCCGCGCACAATCACCACGGCGCGGAGCAGTGCATGGTGCTGAAGGGCGACGT CCGGTGGGGGGAGCTGGTTTATGAAGAGGGAGATTTCCTGGTGATGGGAAAAGGCAGCCATCATCCGGAAATCACTACCG TCCACGGCAATCTTCTATTGCTGGTATCGGGCGGGCTGGAGTTCGTTCACGGCTGA
Upstream 100 bases:
>100_bases CTGAACTTGCGGAGCGATTAGGCGAGCCCCTCGGCACTGTGAAGAGCCGGATTCGCGCCGGCCTGATCCGCATGCGCGGC CTGCTCGAGGAGCCTGCACT
Downstream 100 bases:
>100_bases GGAACAACTCAAAGAACCGTTTTCGCGGCATAATAGCTGCATGCAGCGCGCTGTCTGGACTTTGTTTCTTCTGATCTTTC CCGCCTTCTCCGCCGAGTTC
Product: anti-ECFsigma factor, ChrR
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSEELFTELPEAARLLAESLDPVAPAPGLKARLMTRVAQFEELKPAADIRRDEGDWISEIPGIAMKTLYTDVAKRTSTVL LRMDPGVTYPAHNHHGAEQCMVLKGDVRWGELVYEEGDFLVMGKGSHHPEITTVHGNLLLLVSGGLEFVHG
Sequences:
>Translated_151_residues MSEELFTELPEAARLLAESLDPVAPAPGLKARLMTRVAQFEELKPAADIRRDEGDWISEIPGIAMKTLYTDVAKRTSTVL LRMDPGVTYPAHNHHGAEQCMVLKGDVRWGELVYEEGDFLVMGKGSHHPEITTVHGNLLLLVSGGLEFVHG >Mature_150_residues SEELFTELPEAARLLAESLDPVAPAPGLKARLMTRVAQFEELKPAADIRRDEGDWISEIPGIAMKTLYTDVAKRTSTVLL RMDPGVTYPAHNHHGAEQCMVLKGDVRWGELVYEEGDFLVMGKGSHHPEITTVHGNLLLLVSGGLEFVHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16614; Mature: 16483
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEELFTELPEAARLLAESLDPVAPAPGLKARLMTRVAQFEELKPAADIRRDEGDWISEI CCHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHC PGIAMKTLYTDVAKRTSTVLLRMDPGVTYPAHNHHGAEQCMVLKGDVRWGELVYEEGDFL CCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCEE VMGKGSHHPEITTVHGNLLLLVSGGLEFVHG EECCCCCCCEEEEECCCEEEEEECCEEECCC >Mature Secondary Structure SEELFTELPEAARLLAESLDPVAPAPGLKARLMTRVAQFEELKPAADIRRDEGDWISEI CHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHC PGIAMKTLYTDVAKRTSTVLLRMDPGVTYPAHNHHGAEQCMVLKGDVRWGELVYEEGDFL CCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCEE VMGKGSHHPEITTVHGNLLLLVSGGLEFVHG EECCCCCCCEEEEECCCEEEEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA