| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624663
Identifier: 116624663
GI number: 116624663
Start: 6997089
End: 6998408
Strand: Reverse
Name: 116624663
Synonym: Acid_5587
Alternate gene names: NA
Gene position: 6998408-6997089 (Counterclockwise)
Preceding gene: 116624664
Following gene: 116624658
Centisome position: 70.23
GC content: 65.83
Gene sequence:
>1320_bases ATGAGGTGGGGATTGGCGGCGGCGTTCGCGCTCTGTCTGGCCGCGCAGCTGCTTTTCCCAGGCTATATCGGGATAGCGAA CAACGGAGATTTCGGCAAGGTCTACGGGTGGCTGTGCCTCGCGCCGCGCGGTCCGGAGACGAATTTCACATACTTTCAGC CGGACTATTCGTGGTCGGCGGGTAACTATTGGAACAGTCCCTATCATTCGTCGCAGAGCGCGCTGGCGTGGGCCGCGACG CGGATGGCGGGGGCGACGCACCAGGGCGCGAGCTTCAATCTGCGATGGCTGGGCGCGATTCATGCGGTGCTGTGGCTGGG GGCGCTCGCGATGCTGCTGGCAGGGCGGCGGTGGACGGCCGCGCTGGCGCCGGCCGTGATCTTCACGGATGTGTGCTACA CCGCGTATCTCAATTCGTTCTATATGGACGCGGCCGCGCTTACCGGATTGCTGCTGATGACGGCCTGCGCGGTATGGATG TCATCGGGCGGGCGAATGAGCGCGCGGCAGGTGATTCTCTTCACGGCGTCCGCCCTACTGTTCGTGACGTCGAAGGCGCA GCACGCGGTGTGGATGGCGTTGCCGGCGGCATTCCTGATTGCGTGCGGCGTGTGGACGAAGGAATCGCGGCGGGTGGCGT GGAGCGGTGCGGGCATAGTGCTGCTGGCGGGGTGCTGGATTCTGGCGACGACCGACCAGGCGTATCGCGGGCAGGCGATG TTCAACGTGCTGTTCTACCGGCTGGCTCCGCGGGGCGTGGACCTTTCGTCGCTCGGTGTGGCGCCGGAGGAGATGCGGTA TCGCGGCATGCATTCTTACATGGAGAAATCGCCGGCGAATGATCGGGGATGGACGGAGGCGTTCTACCGGCGGACGGGGT TTGCGCGGTTGGTGACGTGGTACGCGCGGCATCCGGCGGACACGTTCGGATTCCTGCGGGAGACGCTGGTGCACGGTGCG CCGGAGATGCGGCCGGTAAGTCTATCGAATTTTCGCGTGGAGGATGGGCGGGCGCCGGGGGCGCGCACGTCGCGATTCGC TGCATGGAGCGATCTGCGAAGCGCGCTACTGCGGAAGTGGCCGTGGCACATCGTGCTTTGGTACGCGGTGTTCGCGATCG GGTGCGCAGTTAGCGGGTCGCGCGTGGCGTGGGTAGGGATTGGCGTGGCGGTGCTGGGCGCGGGAGAGTTCGCCGCAGCC TCGCTGGGGGATTGCCTGGATGCGGGGCGGCACTTGTTCCTGTTCCACGCAGCGACGGATTTGACGGTGTGTTTCGCGGC CGGATGGGCGATTCAGAAGGCGATGCGCCACAGGCCATAG
Upstream 100 bases:
>100_bases TTCTACTTTGCAGGGAATAGGACATTTCTACTTTGCGTTGACAGCGGAGCGCGGCGATGGAGAAAAAGACGCTATACTCC CGGTGGTGCGGGATCGGTGG
Downstream 100 bases:
>100_bases ACGCCGAAAGCCGCGAGGCAGGGTCCCCAAATCCGCGTCATGCGGCGAGCGTTCCAGAATGTTCCGGCGAGCATGACGAT GGCGAGCGGACTCAGCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MRWGLAAAFALCLAAQLLFPGYIGIANNGDFGKVYGWLCLAPRGPETNFTYFQPDYSWSAGNYWNSPYHSSQSALAWAAT RMAGATHQGASFNLRWLGAIHAVLWLGALAMLLAGRRWTAALAPAVIFTDVCYTAYLNSFYMDAAALTGLLLMTACAVWM SSGGRMSARQVILFTASALLFVTSKAQHAVWMALPAAFLIACGVWTKESRRVAWSGAGIVLLAGCWILATTDQAYRGQAM FNVLFYRLAPRGVDLSSLGVAPEEMRYRGMHSYMEKSPANDRGWTEAFYRRTGFARLVTWYARHPADTFGFLRETLVHGA PEMRPVSLSNFRVEDGRAPGARTSRFAAWSDLRSALLRKWPWHIVLWYAVFAIGCAVSGSRVAWVGIGVAVLGAGEFAAA SLGDCLDAGRHLFLFHAATDLTVCFAAGWAIQKAMRHRP
Sequences:
>Translated_439_residues MRWGLAAAFALCLAAQLLFPGYIGIANNGDFGKVYGWLCLAPRGPETNFTYFQPDYSWSAGNYWNSPYHSSQSALAWAAT RMAGATHQGASFNLRWLGAIHAVLWLGALAMLLAGRRWTAALAPAVIFTDVCYTAYLNSFYMDAAALTGLLLMTACAVWM SSGGRMSARQVILFTASALLFVTSKAQHAVWMALPAAFLIACGVWTKESRRVAWSGAGIVLLAGCWILATTDQAYRGQAM FNVLFYRLAPRGVDLSSLGVAPEEMRYRGMHSYMEKSPANDRGWTEAFYRRTGFARLVTWYARHPADTFGFLRETLVHGA PEMRPVSLSNFRVEDGRAPGARTSRFAAWSDLRSALLRKWPWHIVLWYAVFAIGCAVSGSRVAWVGIGVAVLGAGEFAAA SLGDCLDAGRHLFLFHAATDLTVCFAAGWAIQKAMRHRP >Mature_439_residues MRWGLAAAFALCLAAQLLFPGYIGIANNGDFGKVYGWLCLAPRGPETNFTYFQPDYSWSAGNYWNSPYHSSQSALAWAAT RMAGATHQGASFNLRWLGAIHAVLWLGALAMLLAGRRWTAALAPAVIFTDVCYTAYLNSFYMDAAALTGLLLMTACAVWM SSGGRMSARQVILFTASALLFVTSKAQHAVWMALPAAFLIACGVWTKESRRVAWSGAGIVLLAGCWILATTDQAYRGQAM FNVLFYRLAPRGVDLSSLGVAPEEMRYRGMHSYMEKSPANDRGWTEAFYRRTGFARLVTWYARHPADTFGFLRETLVHGA PEMRPVSLSNFRVEDGRAPGARTSRFAAWSDLRSALLRKWPWHIVLWYAVFAIGCAVSGSRVAWVGIGVAVLGAGEFAAA SLGDCLDAGRHLFLFHAATDLTVCFAAGWAIQKAMRHRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48133; Mature: 48133
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWGLAAAFALCLAAQLLFPGYIGIANNGDFGKVYGWLCLAPRGPETNFTYFQPDYSWSA CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHEEEEEEECCCCCCCCEEEECCCCCCCC GNYWNSPYHSSQSALAWAATRMAGATHQGASFNLRWLGAIHAVLWLGALAMLLAGRRWTA CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHH ALAPAVIFTDVCYTAYLNSFYMDAAALTGLLLMTACAVWMSSGGRMSARQVILFTASALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEHHHHHHH FVTSKAQHAVWMALPAAFLIACGVWTKESRRVAWSGAGIVLLAGCWILATTDQAYRGQAM HEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCEEEEECCHHHHHHHH FNVLFYRLAPRGVDLSSLGVAPEEMRYRGMHSYMEKSPANDRGWTEAFYRRTGFARLVTW HHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHH YARHPADTFGFLRETLVHGAPEMRPVSLSNFRVEDGRAPGARTSRFAAWSDLRSALLRKW HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHC PWHIVLWYAVFAIGCAVSGSRVAWVGIGVAVLGAGEFAAASLGDCLDAGRHLFLFHAATD CHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCHHHHHHHHHHHCCCEEEEEEEHHH LTVCFAAGWAIQKAMRHRP HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRWGLAAAFALCLAAQLLFPGYIGIANNGDFGKVYGWLCLAPRGPETNFTYFQPDYSWSA CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHEEEEEEECCCCCCCCEEEECCCCCCCC GNYWNSPYHSSQSALAWAATRMAGATHQGASFNLRWLGAIHAVLWLGALAMLLAGRRWTA CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHH ALAPAVIFTDVCYTAYLNSFYMDAAALTGLLLMTACAVWMSSGGRMSARQVILFTASALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEHHHHHHH FVTSKAQHAVWMALPAAFLIACGVWTKESRRVAWSGAGIVLLAGCWILATTDQAYRGQAM HEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCEEEEECCHHHHHHHH FNVLFYRLAPRGVDLSSLGVAPEEMRYRGMHSYMEKSPANDRGWTEAFYRRTGFARLVTW HHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHH YARHPADTFGFLRETLVHGAPEMRPVSLSNFRVEDGRAPGARTSRFAAWSDLRSALLRKW HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHC PWHIVLWYAVFAIGCAVSGSRVAWVGIGVAVLGAGEFAAASLGDCLDAGRHLFLFHAATD CHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCHHHHHHHHHHHCCCEEEEEEEHHH LTVCFAAGWAIQKAMRHRP HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA