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The map label for this gene is yehT [C]

Identifier: 116624658

GI number: 116624658

Start: 6993833

End: 6994588

Strand: Reverse

Name: yehT [C]

Synonym: Acid_5582

Alternate gene names: 116624658

Gene position: 6994588-6993833 (Counterclockwise)

Preceding gene: 116624663

Following gene: 116624654

Centisome position: 70.19

GC content: 62.96

Gene sequence:

>756_bases
GTGCGCGCGATCATCGTAGATGACGAGGAACTGGCGCGGGGCTACCTGCGCGAGTTGCTGAGTACGCACCCGGAAATCGA
AATCGCGGGCGAATGCGCCAACGGCTTCGAGGCGGTCAAGTCGATTTCGGAGATTCATCCGGACCTCGTTTTCCTCGATG
TAAAAATGCCCAAGTTAGACGGGTTTGAGGTGCTCGAGCTGATTGAGAGCAGTGCAATGCCCGTCGTGATCTTCGTCACG
GCATTCGACCAGTACGCAACGCGGGCTTTCGATGCGCATGCGGTGGACTATTTGCTGAAGCCGTTCAGCGCAGAGCGGCT
GGCGCGCGCGCTGGAGCGGGCGCGGTCGCGGATGGGAGAGCGTGGAATTCCGGCGGCGGTAGCGGCGGAGGCGCGCGCGT
CCGGCGAGCGGCCGCAGCGAATCGTGGTGAAGGACGGGACGCGGGTGCATGTGATCGCGCTCGGCAAGTTGGACTACGTG
GAGGCGCAGGATGATTATGTGGCGCTGCACAGTGAAGGCAAGACGTACTTGAAGCAGCAGGCGATCGGGAGCGTGGAAGC
CATGCTGGACCCGGCGCTGTTCGTGCGGATTCACCGCTCGGCGATCGTGAATCTGGAGCGGGTGGCGCGGATCGAGCCGT
ATGGTAAGGAGAGCCGCATCGCGATCTTGAGCGACGGCACGCGGCTACCGGTCAGTCGCACGGGATACGCGCGGCTGATG
GAAGTGATGGAATCGGGAAGTGGGCGCGTGGGATAA

Upstream 100 bases:

>100_bases
CCAAAATTAAGTGTTCTTCATTCTCGCACAATTGGAACCGATCTGAAACAGTTAATCTGGGGGAGTTGGGATGTAAACTC
CCGTCCGAGAAGGGGTGTAT

Downstream 100 bases:

>100_bases
GAAAAACAAAATGGGCCGCAGATGAACGCAGATAACAACAAAGACTATGTTAGGTTGCGGCCCGGTGTAAGCGTGACGCA
AGGGAAGCGGAGATTGACGC

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRAIIVDDEELARGYLRELLSTHPEIEIAGECANGFEAVKSISEIHPDLVFLDVKMPKLDGFEVLELIESSAMPVVIFVT
AFDQYATRAFDAHAVDYLLKPFSAERLARALERARSRMGERGIPAAVAAEARASGERPQRIVVKDGTRVHVIALGKLDYV
EAQDDYVALHSEGKTYLKQQAIGSVEAMLDPALFVRIHRSAIVNLERVARIEPYGKESRIAILSDGTRLPVSRTGYARLM
EVMESGSGRVG

Sequences:

>Translated_251_residues
MRAIIVDDEELARGYLRELLSTHPEIEIAGECANGFEAVKSISEIHPDLVFLDVKMPKLDGFEVLELIESSAMPVVIFVT
AFDQYATRAFDAHAVDYLLKPFSAERLARALERARSRMGERGIPAAVAAEARASGERPQRIVVKDGTRVHVIALGKLDYV
EAQDDYVALHSEGKTYLKQQAIGSVEAMLDPALFVRIHRSAIVNLERVARIEPYGKESRIAILSDGTRLPVSRTGYARLM
EVMESGSGRVG
>Mature_251_residues
MRAIIVDDEELARGYLRELLSTHPEIEIAGECANGFEAVKSISEIHPDLVFLDVKMPKLDGFEVLELIESSAMPVVIFVT
AFDQYATRAFDAHAVDYLLKPFSAERLARALERARSRMGERGIPAAVAAEARASGERPQRIVVKDGTRVHVIALGKLDYV
EAQDDYVALHSEGKTYLKQQAIGSVEAMLDPALFVRIHRSAIVNLERVARIEPYGKESRIAILSDGTRLPVSRTGYARLM
EVMESGSGRVG

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=247, Percent_Identity=33.1983805668016, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1788724, Length=248, Percent_Identity=31.0483870967742, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1788550, Length=118, Percent_Identity=35.5932203389831, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788192, Length=105, Percent_Identity=31.4285714285714, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 27722; Mature: 27722

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIIVDDEELARGYLRELLSTHPEIEIAGECANGFEAVKSISEIHPDLVFLDVKMPKLD
CEEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCC
GFEVLELIESSAMPVVIFVTAFDQYATRAFDAHAVDYLLKPFSAERLARALERARSRMGE
CHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
RGIPAAVAAEARASGERPQRIVVKDGTRVHVIALGKLDYVEAQDDYVALHSEGKTYLKQQ
CCCCHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCEEEEECCCCEEEEECCCHHHHHHH
AIGSVEAMLDPALFVRIHRSAIVNLERVARIEPYGKESRIAILSDGTRLPVSRTGYARLM
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHH
EVMESGSGRVG
HHHHCCCCCCC
>Mature Secondary Structure
MRAIIVDDEELARGYLRELLSTHPEIEIAGECANGFEAVKSISEIHPDLVFLDVKMPKLD
CEEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCC
GFEVLELIESSAMPVVIFVTAFDQYATRAFDAHAVDYLLKPFSAERLARALERARSRMGE
CHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
RGIPAAVAAEARASGERPQRIVVKDGTRVHVIALGKLDYVEAQDDYVALHSEGKTYLKQQ
CCCCHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCEEEEECCCCEEEEECCCHHHHHHH
AIGSVEAMLDPALFVRIHRSAIVNLERVARIEPYGKESRIAILSDGTRLPVSRTGYARLM
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHH
EVMESGSGRVG
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]