| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624646
Identifier: 116624646
GI number: 116624646
Start: 6981432
End: 6983966
Strand: Reverse
Name: 116624646
Synonym: Acid_5570
Alternate gene names: NA
Gene position: 6983966-6981432 (Counterclockwise)
Preceding gene: 116624648
Following gene: 116624645
Centisome position: 70.08
GC content: 65.36
Gene sequence:
>2535_bases ATGTCCAAGCGACGAACGTTTCTTCAACAAGTGGCGGCGGCGGGCGTGGCAACACAGGTGGGCGTTGGAGCGAACACGCC GATCGAGGCCGGGTATCCGCGAGTATTTTCGGGGCGGAAGCTGACGGCGATCGCGTTCCCGCTCGGCGGCGTGTGCGCGG GCTCGATCTCGCTGGGCGGCCGCGGGCAACTGCGCGATTGGGAGATCTTCAATCGTTCGGACAAGGGCAATGCCCCGAGC TACGCATTCCCGGCAATCTGGGTGCAGAGCGGCGCGCGCAAGCCGGTGGCGCGCGTATTGGAATCGCGCATCCAGCCGCC GTACGAAGGGCAGAATGGATTGGGCACGCGAAGCGCTCCCGGACTGGTGCGGCTCGCAGGGGCGACGTTCACCGGCGAAT TTCCGCTGGCGCGCATCGATTTCACGGACGCGGCGCTGCCGGTAAAAGTGTCGCTGGAGGCGTTCACTCCGTTCATCCCG CACGAGCCGGATGACTCGGGGCTGCCGGTGGCCGTACTGCGATACCGGGTGAGCAATCCGGGCGCGGCAGCGGCAAAGGT CTCGATCGCGTGGTCGATCGATAGCCCGGTAGGACGCACGCAAGCGGCGGACACGCGGACGAACGAGTACCGCGAGGCAG GCGGGCTCGCGGGTTTGATGATGACGAATGCCGAACTGCCGGCGGCGGATGCGCTGAAGGGAAGCTTCGCGCTGGCCGCC ATGGGGACGGCGGGCGCGCGCGTGACGCACCTGCGCGGCTGGGAGCAAGGGCGGTGGTGGAATTCACCGATGCTCTACTG GGACGATTTTTCGGCCGACGGCGAACTCGGTCCCGAGGCGGCGAAGATGAACGCGGTGGGCGCGCTTTGCGTGCAGCGCA CGATCGCGGCGGGCGGGCATGCGGACTTCCCGTTTCTGCTGGCGTGGCATTTCCCAAATCGTACGCCGCGGCGGATCGGC TGGTCGTCAACGAAAGGCGAGGAAGACACGCTGATCGGCAATCACTATTGCGCGCGCTTCGCGGACGCTTGGGCGGCGGC GGAGTACGCAGCGGCGAATCTGGAAAGGCTGGAGAAAAAGACGCGGCGGTTCGCGGCGGCGCTGAGAGAGTCAACGCTCC CGGCGGTGGTGAAGGAGGCGGCGATCGCGAACCTTTCGACGCTGGTGACCACCACGAGTTTCCGCACAGCCGATGGCGAG TTCCACGGCTGGGAGGGCGTGAACGATCATGGCGGGTGCTGTCACGGCAGTTGCACCCACGTCTGGAATTACGAGACCGC GACAGCGCACCTGTTCCCGAGTTTCGCGCGGTCGCTGCGCGGCGTGAGTTTCGGCTACAGCCTGGATGACGCGGGCGCAA TCCGGTTCCGCGAGACGCTGCCGCACAATCCGGAGAATCGCTGGGGGTATGCGGCGGCAGACGGGCAGATGGGGCAGATC ATGCACGCGTACCTGGACTGGTCGCTCAGCGGCGACGATGCATGGCTGCGCGAAATGTGGCCTCGGGTGAAGAAGGCGAT CGAGTTCGCGTGGATTCCAGGCGGCTGGGACGGCGACCGCGACGGCGTGCTGGAAGGCGCACAGCACAACACGTACGACG TGGAGTTCTACGGTCCCAATCCGATGTGCGGGATTTATTACCTGGGCGCGCTGCGCGCGGGTGAAGAGATGGCGCGCGCG GTGGGCGATACGGCATCGGCGGCGGAGTATCGCCGGCTGTTCGAGAGCGGACGTCAGTGGATCGATGCCAAGCTGTTCAA CGGCGAGTATTACATCCAGCAGATTCGCGGCGTGGCGAAGGACAAAGTGGCGAAAGCGATCATCGGCACGATGGGCAGCG ATGATACCGAGAATCCGCAATACCAGGTGGGCGCGGGCTGCCTGGTGGACCAACTGGTGGGGCAGTACATGGCCGAGGTC GCGGGGCTGGGGCCGCTGGTGTCGCCGGAGAATATCCGCAAGACTTTGCAATCGATCTACCGGTACAACTATAAGCGATC GATGGCGACGCACGAAACGGTGCAGCGCACGTTCGCGCTGAATGACGAGGCGGCGATCGTGATCTGCGATTACGGGAAGG CAGAGCGGCCGCGAATTCCGTTCCCCTATTACGCCGAGGTGATGACGGGATTCGAGTACGCGGCGGCGACGCACATGCTT TATGCAGGAATGACCCGCGAAGGCGTCGAGTGCATCGAAAATATTCGGGCGCGGTATGACGGAGAGAAGCGGAATCCGTG GGACGAAGCCGAGTGCGGGCATCATTACGCGCGCGCCATGGCGGCGTGGAGCGGAGTGCTGGCGCTGAGCGGGTTCCGCT ATCACGGCGGCGAGCGGTCGGTGACGATTCAGGCGCCCCCGGATTTCCGGTGCTTCTGGTCCAGCGCGAGCGGGTGGGGG ACGTTCCACGTGACGGCGGCGGGAACGACGCTGCGTGTGGATCACGGCACGCTGGAGTGCCGGATTGTGACGGTGAACGG CAAGCGCAGCACACCCAACCGGACGCTGAAGGAAGGGGAAGAGCTGCGCGTGTGA
Upstream 100 bases:
>100_bases GGTATAGCAAGGACGAAGAGCCAGAGTACCTGGTCCGCTAGAGGCATCGACTCCAGAGATGCACGTCGAGTGCCACGGGG ATATATTAGGAACGCGAAAT
Downstream 100 bases:
>100_bases AGCCGGCGATCGTGGTGGTGGGCGGTTTTCTGGGGGCAGGGAAGACGACGTTGATTCTGGCGGCGGCGCGCGTGCTGCAG CAGCGGGGCGTTCGCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 844; Mature: 843
Protein sequence:
>844_residues MSKRRTFLQQVAAAGVATQVGVGANTPIEAGYPRVFSGRKLTAIAFPLGGVCAGSISLGGRGQLRDWEIFNRSDKGNAPS YAFPAIWVQSGARKPVARVLESRIQPPYEGQNGLGTRSAPGLVRLAGATFTGEFPLARIDFTDAALPVKVSLEAFTPFIP HEPDDSGLPVAVLRYRVSNPGAAAAKVSIAWSIDSPVGRTQAADTRTNEYREAGGLAGLMMTNAELPAADALKGSFALAA MGTAGARVTHLRGWEQGRWWNSPMLYWDDFSADGELGPEAAKMNAVGALCVQRTIAAGGHADFPFLLAWHFPNRTPRRIG WSSTKGEEDTLIGNHYCARFADAWAAAEYAAANLERLEKKTRRFAAALRESTLPAVVKEAAIANLSTLVTTTSFRTADGE FHGWEGVNDHGGCCHGSCTHVWNYETATAHLFPSFARSLRGVSFGYSLDDAGAIRFRETLPHNPENRWGYAAADGQMGQI MHAYLDWSLSGDDAWLREMWPRVKKAIEFAWIPGGWDGDRDGVLEGAQHNTYDVEFYGPNPMCGIYYLGALRAGEEMARA VGDTASAAEYRRLFESGRQWIDAKLFNGEYYIQQIRGVAKDKVAKAIIGTMGSDDTENPQYQVGAGCLVDQLVGQYMAEV AGLGPLVSPENIRKTLQSIYRYNYKRSMATHETVQRTFALNDEAAIVICDYGKAERPRIPFPYYAEVMTGFEYAAATHML YAGMTREGVECIENIRARYDGEKRNPWDEAECGHHYARAMAAWSGVLALSGFRYHGGERSVTIQAPPDFRCFWSSASGWG TFHVTAAGTTLRVDHGTLECRIVTVNGKRSTPNRTLKEGEELRV
Sequences:
>Translated_844_residues MSKRRTFLQQVAAAGVATQVGVGANTPIEAGYPRVFSGRKLTAIAFPLGGVCAGSISLGGRGQLRDWEIFNRSDKGNAPS YAFPAIWVQSGARKPVARVLESRIQPPYEGQNGLGTRSAPGLVRLAGATFTGEFPLARIDFTDAALPVKVSLEAFTPFIP HEPDDSGLPVAVLRYRVSNPGAAAAKVSIAWSIDSPVGRTQAADTRTNEYREAGGLAGLMMTNAELPAADALKGSFALAA MGTAGARVTHLRGWEQGRWWNSPMLYWDDFSADGELGPEAAKMNAVGALCVQRTIAAGGHADFPFLLAWHFPNRTPRRIG WSSTKGEEDTLIGNHYCARFADAWAAAEYAAANLERLEKKTRRFAAALRESTLPAVVKEAAIANLSTLVTTTSFRTADGE FHGWEGVNDHGGCCHGSCTHVWNYETATAHLFPSFARSLRGVSFGYSLDDAGAIRFRETLPHNPENRWGYAAADGQMGQI MHAYLDWSLSGDDAWLREMWPRVKKAIEFAWIPGGWDGDRDGVLEGAQHNTYDVEFYGPNPMCGIYYLGALRAGEEMARA VGDTASAAEYRRLFESGRQWIDAKLFNGEYYIQQIRGVAKDKVAKAIIGTMGSDDTENPQYQVGAGCLVDQLVGQYMAEV AGLGPLVSPENIRKTLQSIYRYNYKRSMATHETVQRTFALNDEAAIVICDYGKAERPRIPFPYYAEVMTGFEYAAATHML YAGMTREGVECIENIRARYDGEKRNPWDEAECGHHYARAMAAWSGVLALSGFRYHGGERSVTIQAPPDFRCFWSSASGWG TFHVTAAGTTLRVDHGTLECRIVTVNGKRSTPNRTLKEGEELRV >Mature_843_residues SKRRTFLQQVAAAGVATQVGVGANTPIEAGYPRVFSGRKLTAIAFPLGGVCAGSISLGGRGQLRDWEIFNRSDKGNAPSY AFPAIWVQSGARKPVARVLESRIQPPYEGQNGLGTRSAPGLVRLAGATFTGEFPLARIDFTDAALPVKVSLEAFTPFIPH EPDDSGLPVAVLRYRVSNPGAAAAKVSIAWSIDSPVGRTQAADTRTNEYREAGGLAGLMMTNAELPAADALKGSFALAAM GTAGARVTHLRGWEQGRWWNSPMLYWDDFSADGELGPEAAKMNAVGALCVQRTIAAGGHADFPFLLAWHFPNRTPRRIGW SSTKGEEDTLIGNHYCARFADAWAAAEYAAANLERLEKKTRRFAAALRESTLPAVVKEAAIANLSTLVTTTSFRTADGEF HGWEGVNDHGGCCHGSCTHVWNYETATAHLFPSFARSLRGVSFGYSLDDAGAIRFRETLPHNPENRWGYAAADGQMGQIM HAYLDWSLSGDDAWLREMWPRVKKAIEFAWIPGGWDGDRDGVLEGAQHNTYDVEFYGPNPMCGIYYLGALRAGEEMARAV GDTASAAEYRRLFESGRQWIDAKLFNGEYYIQQIRGVAKDKVAKAIIGTMGSDDTENPQYQVGAGCLVDQLVGQYMAEVA GLGPLVSPENIRKTLQSIYRYNYKRSMATHETVQRTFALNDEAAIVICDYGKAERPRIPFPYYAEVMTGFEYAAATHMLY AGMTREGVECIENIRARYDGEKRNPWDEAECGHHYARAMAAWSGVLALSGFRYHGGERSVTIQAPPDFRCFWSSASGWGT FHVTAAGTTLRVDHGTLECRIVTVNGKRSTPNRTLKEGEELRV
Specific function: Unknown
COG id: COG4354
COG function: function code G; Predicted bile acid beta-glucosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24308251, Length=706, Percent_Identity=23.371104815864, Blast_Score=97, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92309; Mature: 92177
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRRTFLQQVAAAGVATQVGVGANTPIEAGYPRVFSGRKLTAIAFPLGGVCAGSISLGG CCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCEEECCEECCC RGQLRDWEIFNRSDKGNAPSYAFPAIWVQSGARKPVARVLESRIQPPYEGQNGLGTRSAP CCCCCCCCEECCCCCCCCCCCCCCHHEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC GLVRLAGATFTGEFPLARIDFTDAALPVKVSLEAFTPFIPHEPDDSGLPVAVLRYRVSNP CEEEEECCEEECCCCEEEEECCCCCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEEECCCC GAAAAKVSIAWSIDSPVGRTQAADTRTNEYREAGGLAGLMMTNAELPAADALKGSFALAA CCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCEEEEEEECCCCCHHHHHCCCEEEEE MGTAGARVTHLRGWEQGRWWNSPMLYWDDFSADGELGPEAAKMNAVGALCVQRTIAAGGH ECCCCCEEEEECCCCCCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC ADFPFLLAWHFPNRTPRRIGWSSTKGEEDTLIGNHYCARFADAWAAAEYAAANLERLEKK CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHH TRRFAAALRESTLPAVVKEAAIANLSTLVTTTSFRTADGEFHGWEGVNDHGGCCHGSCTH HHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCEEECCCCCCCCCCCCCCCCCCCCCCCE VWNYETATAHLFPSFARSLRGVSFGYSLDDAGAIRFRETLPHNPENRWGYAAADGQMGQI EECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHCCCCCCCCCEEEECCCCHHHH MHAYLDWSLSGDDAWLREMWPRVKKAIEFAWIPGGWDGDRDGVLEGAQHNTYDVEFYGPN HHHHHCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCC PMCGIYYLGALRAGEEMARAVGDTASAAEYRRLFESGRQWIDAKLFNGEYYIQQIRGVAK CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHEEEEEEECCHHHHHHHHHHHH DKVAKAIIGTMGSDDTENPQYQVGAGCLVDQLVGQYMAEVAGLGPLVSPENIRKTLQSIY HHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RYNYKRSMATHETVQRTFALNDEAAIVICDYGKAERPRIPFPYYAEVMTGFEYAAATHML HHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHH YAGMTREGVECIENIRARYDGEKRNPWDEAECGHHYARAMAAWSGVLALSGFRYHGGERS HHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEE VTIQAPPDFRCFWSSASGWGTFHVTAAGTTLRVDHGTLECRIVTVNGKRSTPNRTLKEGE EEEECCCCCEEEECCCCCCEEEEEEECCEEEEEECCEEEEEEEEECCCCCCCCCHHHCCH ELRV HCCC >Mature Secondary Structure SKRRTFLQQVAAAGVATQVGVGANTPIEAGYPRVFSGRKLTAIAFPLGGVCAGSISLGG CHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCEEECCEECCC RGQLRDWEIFNRSDKGNAPSYAFPAIWVQSGARKPVARVLESRIQPPYEGQNGLGTRSAP CCCCCCCCEECCCCCCCCCCCCCCHHEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC GLVRLAGATFTGEFPLARIDFTDAALPVKVSLEAFTPFIPHEPDDSGLPVAVLRYRVSNP CEEEEECCEEECCCCEEEEECCCCCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEEECCCC GAAAAKVSIAWSIDSPVGRTQAADTRTNEYREAGGLAGLMMTNAELPAADALKGSFALAA CCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCEEEEEEECCCCCHHHHHCCCEEEEE MGTAGARVTHLRGWEQGRWWNSPMLYWDDFSADGELGPEAAKMNAVGALCVQRTIAAGGH ECCCCCEEEEECCCCCCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC ADFPFLLAWHFPNRTPRRIGWSSTKGEEDTLIGNHYCARFADAWAAAEYAAANLERLEKK CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHH TRRFAAALRESTLPAVVKEAAIANLSTLVTTTSFRTADGEFHGWEGVNDHGGCCHGSCTH HHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCEEECCCCCCCCCCCCCCCCCCCCCCCE VWNYETATAHLFPSFARSLRGVSFGYSLDDAGAIRFRETLPHNPENRWGYAAADGQMGQI EECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHCCCCCCCCCEEEECCCCHHHH MHAYLDWSLSGDDAWLREMWPRVKKAIEFAWIPGGWDGDRDGVLEGAQHNTYDVEFYGPN HHHHHCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCC PMCGIYYLGALRAGEEMARAVGDTASAAEYRRLFESGRQWIDAKLFNGEYYIQQIRGVAK CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHEEEEEEECCHHHHHHHHHHHH DKVAKAIIGTMGSDDTENPQYQVGAGCLVDQLVGQYMAEVAGLGPLVSPENIRKTLQSIY HHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RYNYKRSMATHETVQRTFALNDEAAIVICDYGKAERPRIPFPYYAEVMTGFEYAAATHML HHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHH YAGMTREGVECIENIRARYDGEKRNPWDEAECGHHYARAMAAWSGVLALSGFRYHGGERS HHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEE VTIQAPPDFRCFWSSASGWGTFHVTAAGTTLRVDHGTLECRIVTVNGKRSTPNRTLKEGE EEEECCCCCEEEECCCCCCEEEEEEECCEEEEEECCEEEEEEEEECCCCCCCCCHHHCCH ELRV HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA