Click here to switch to the map view.

The map label for this gene is 116624564

Identifier: 116624564

GI number: 116624564

Start: 6882401

End: 6882808

Strand: Direct

Name: 116624564

Synonym: Acid_5488

Alternate gene names: NA

Gene position: 6882401-6882808 (Clockwise)

Preceding gene: 116624562

Following gene: 116624565

Centisome position: 69.06

GC content: 61.52

Gene sequence:

>408_bases
ATGGCATCGAAACCTCCGCGGCCCACCGAGGCCGAACTCAACATCCTGCAGGTGCTCTGGCAGGGAGGGCCGCGCTCGGT
TCGCGCTATCCAGCAGGTGCTGAACGAAGTCAAACCGACCGGCTACACTACCGTCCTGAAGATGCTGCAGATCATGACGG
AAAAAGGCCTGGTGGATCGCGACGACAAGGTGCGCCCGCAGATCTATCGCGCACGCCACTCGCGGGAACTCACCCAGCGG
CGGCTGCTCGGCGACCTGGTGCACCGTGCCTTTGGTGGCAGCGTGAAAGCGCTCGTGCTGCAGGCGCTGGCCACGAAGAA
GTCGTCGCCGGAGGAATTGGCAGCCCTCGAAAAACTCCTGGATCGCATGGAGGACAGGAAAAATGACACCTCTACTGGAA
GCTTTTAG

Upstream 100 bases:

>100_bases
CTAAACGCACCAGCGTTATCAGTTCACACATTTGTCTTCCGGCCATAGCTTGACGAAAGTTTTCGTTGACAATGACGAAG
ATCTTCGTCATGATAGCCGC

Downstream 100 bases:

>100_bases
CGCGGCGCTGCTGCACTTCGCGTGGCAGGGCTGCCTGATTATGGCCCTACTATGGGTGACGCTGTTCGTCTTACGGGCAG
GCTCCGCAAAGGCTCGCTAC

Product: CopY family transcriptional regulator

Products: NA

Alternate protein names: CopY Family Transcriptional Regulator; Penicillinase Repressor; Transcriptional Regulator; Transcriptional Repressor Copy Family; MarR Family Transcriptional Regulatory Protein

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MASKPPRPTEAELNILQVLWQGGPRSVRAIQQVLNEVKPTGYTTVLKMLQIMTEKGLVDRDDKVRPQIYRARHSRELTQR
RLLGDLVHRAFGGSVKALVLQALATKKSSPEELAALEKLLDRMEDRKNDTSTGSF

Sequences:

>Translated_135_residues
MASKPPRPTEAELNILQVLWQGGPRSVRAIQQVLNEVKPTGYTTVLKMLQIMTEKGLVDRDDKVRPQIYRARHSRELTQR
RLLGDLVHRAFGGSVKALVLQALATKKSSPEELAALEKLLDRMEDRKNDTSTGSF
>Mature_134_residues
ASKPPRPTEAELNILQVLWQGGPRSVRAIQQVLNEVKPTGYTTVLKMLQIMTEKGLVDRDDKVRPQIYRARHSRELTQRR
LLGDLVHRAFGGSVKALVLQALATKKSSPEELAALEKLLDRMEDRKNDTSTGSF

Specific function: Unknown

COG id: COG3682

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15206; Mature: 15075

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKPPRPTEAELNILQVLWQGGPRSVRAIQQVLNEVKPTGYTTVLKMLQIMTEKGLVDR
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
DDKVRPQIYRARHSRELTQRRLLGDLVHRAFGGSVKALVLQALATKKSSPEELAALEKLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
DRMEDRKNDTSTGSF
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
ASKPPRPTEAELNILQVLWQGGPRSVRAIQQVLNEVKPTGYTTVLKMLQIMTEKGLVDR
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
DDKVRPQIYRARHSRELTQRRLLGDLVHRAFGGSVKALVLQALATKKSSPEELAALEKLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
DRMEDRKNDTSTGSF
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA