| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624551
Identifier: 116624551
GI number: 116624551
Start: 6868376
End: 6869302
Strand: Direct
Name: 116624551
Synonym: Acid_5475
Alternate gene names: NA
Gene position: 6868376-6869302 (Clockwise)
Preceding gene: 116624549
Following gene: 116624553
Centisome position: 68.92
GC content: 63.43
Gene sequence:
>927_bases GTGACAGATATCGAATTGACCCCGGCGGGTTATCCGATCCGAGCGGTCTCTAAGCTCACCGGCATCAGCATCGACGTATT GCGGGTGTGGGAGCGGCGCTACAAATCCGTAGTCCCGGCGCGGACTGCGCGGGGGCGCCTGTACGACGCGGCGCAGGTGC GACGGCTGATGCTGCTGCGTGACGCAACGCTGGCTGGGCACGCGATCGGCCAGATATCGAAACTGGAAGATCAGCAGATC CGCGAACTCCTGAACACGCCTGCGGTCGCCGAGGCGCCGGATCCAGGTGGAGAAACAGCCGTAATCCGTCCCGTGCTGAA CGCGATCAACGAGTACGACTATACGACGGCGAATAGTGAACTGGGCGTGCTGGCTTCTCTGCTTCCGATTCCGGAGCTGG TATTTCGCGTAGTGCATCCATTGCTGGACACGGTGGGGAAACGCTGGTACAGCGGCGCGCTCACTGTCGCGCAGGAGCAC ATGGTAAGCGCGCTCTTACGGAACCTGTTGGGCGGGCTGATGCGGATTCATCATCCGCGCGAACCGCGGCGGCGGCTGCT GTTTGCGACGCCGGCCGGGGAACTGCATGAATTCGGCATCCTGTGCGGGGCCATGTTGTCGGTGGCGGCGGGAGCGGAAG CGGTTTACCTGGGTCCGAATCTGCCGGTGCCGGAAATCGTGGGAATCACCAACCGGTTGAAGCCGCGTGCGCTGGTTCTC GGCGTGGTGGCGCCGCAGTATATCGCCGATCTGCGAGGGTCGCTCGCATTCATCGGCGACCAGATACCCGGGGCGACGGA CCTCTGGGTGGGCGGGCACAAGGCGAAAGCGGCGATCTCCGACGGAGGTTCGACGCGCGCGGTCTTTTTGGAGACCTTCG AAGCGATGAAACCATATCTGGACCGGCTGCGGGAACCGGCGGTTTGA
Upstream 100 bases:
>100_bases CCGATCCGCACTATAAAGATCTCGGAGATTTCCATTTTGTCCAGTAAATGCCCCGGACAAATTATGGACAATAATTGACA AGGACATTAATCTAGAGGAC
Downstream 100 bases:
>100_bases AGTGAGAGATCGCTCCCTCACGGTCGCGGTTCGCGGCCGGGGCGATCGATGGCGCGGACGATCTCTTCGACGTCCTCGAT CTTTTCGCCAAGCAGGTTCA
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein MerR; Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator Merr Family; Transcriptional Regulatory Protein MerR-Family; MerR Family Regulatory Protein; MerR-Family Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator CarH; Transcriptional Regulator Marr Family; Cobalamin
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTDIELTPAGYPIRAVSKLTGISIDVLRVWERRYKSVVPARTARGRLYDAAQVRRLMLLRDATLAGHAIGQISKLEDQQI RELLNTPAVAEAPDPGGETAVIRPVLNAINEYDYTTANSELGVLASLLPIPELVFRVVHPLLDTVGKRWYSGALTVAQEH MVSALLRNLLGGLMRIHHPREPRRRLLFATPAGELHEFGILCGAMLSVAAGAEAVYLGPNLPVPEIVGITNRLKPRALVL GVVAPQYIADLRGSLAFIGDQIPGATDLWVGGHKAKAAISDGGSTRAVFLETFEAMKPYLDRLREPAV
Sequences:
>Translated_308_residues MTDIELTPAGYPIRAVSKLTGISIDVLRVWERRYKSVVPARTARGRLYDAAQVRRLMLLRDATLAGHAIGQISKLEDQQI RELLNTPAVAEAPDPGGETAVIRPVLNAINEYDYTTANSELGVLASLLPIPELVFRVVHPLLDTVGKRWYSGALTVAQEH MVSALLRNLLGGLMRIHHPREPRRRLLFATPAGELHEFGILCGAMLSVAAGAEAVYLGPNLPVPEIVGITNRLKPRALVL GVVAPQYIADLRGSLAFIGDQIPGATDLWVGGHKAKAAISDGGSTRAVFLETFEAMKPYLDRLREPAV >Mature_307_residues TDIELTPAGYPIRAVSKLTGISIDVLRVWERRYKSVVPARTARGRLYDAAQVRRLMLLRDATLAGHAIGQISKLEDQQIR ELLNTPAVAEAPDPGGETAVIRPVLNAINEYDYTTANSELGVLASLLPIPELVFRVVHPLLDTVGKRWYSGALTVAQEHM VSALLRNLLGGLMRIHHPREPRRRLLFATPAGELHEFGILCGAMLSVAAGAEAVYLGPNLPVPEIVGITNRLKPRALVLG VVAPQYIADLRGSLAFIGDQIPGATDLWVGGHKAKAAISDGGSTRAVFLETFEAMKPYLDRLREPAV
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33450; Mature: 33319
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIELTPAGYPIRAVSKLTGISIDVLRVWERRYKSVVPARTARGRLYDAAQVRRLMLLR CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHH DATLAGHAIGQISKLEDQQIRELLNTPAVAEAPDPGGETAVIRPVLNAINEYDYTTANSE HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH LGVLASLLPIPELVFRVVHPLLDTVGKRWYSGALTVAQEHMVSALLRNLLGGLMRIHHPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EPRRRLLFATPAGELHEFGILCGAMLSVAAGAEAVYLGPNLPVPEIVGITNRLKPRALVL CHHHCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCHHHEE GVVAPQYIADLRGSLAFIGDQIPGATDLWVGGHKAKAAISDGGSTRAVFLETFEAMKPYL HHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCHHHHEECCCCCCHHHHHHHHHHHHHHH DRLREPAV HHHCCCCC >Mature Secondary Structure TDIELTPAGYPIRAVSKLTGISIDVLRVWERRYKSVVPARTARGRLYDAAQVRRLMLLR CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHH DATLAGHAIGQISKLEDQQIRELLNTPAVAEAPDPGGETAVIRPVLNAINEYDYTTANSE HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH LGVLASLLPIPELVFRVVHPLLDTVGKRWYSGALTVAQEHMVSALLRNLLGGLMRIHHPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EPRRRLLFATPAGELHEFGILCGAMLSVAAGAEAVYLGPNLPVPEIVGITNRLKPRALVL CHHHCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCHHHEE GVVAPQYIADLRGSLAFIGDQIPGATDLWVGGHKAKAAISDGGSTRAVFLETFEAMKPYL HHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCHHHHEECCCCCCHHHHHHHHHHHHHHH DRLREPAV HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA