| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624482
Identifier: 116624482
GI number: 116624482
Start: 6769759
End: 6770757
Strand: Reverse
Name: 116624482
Synonym: Acid_5404
Alternate gene names: NA
Gene position: 6770757-6769759 (Counterclockwise)
Preceding gene: 116624483
Following gene: 116624481
Centisome position: 67.94
GC content: 60.96
Gene sequence:
>999_bases ATGAGATACGTTTTTGCGAATCCGAAACGTCCGGGACATGTTTCGATTCTCCTGGCCGCGGCGTTGGCCTGCGCGTCCGC ATGGGCGCTGCTTGCCGTTCCGTCTTCTGGCGCCAGTGCCGCCCGGCATACTATCGCCGGGAGCCCGCAAGGCGCGAAGG GTTTTGATACTCCGCAAAGGGCTGCGGATGCGCTGGTTGACGCGGCTGGGAAGTTCGACGTGGCCGCGCTCGCGGAGATA TTCGGTCCCGAGGGAGATGACGTTGTCTTCACCGGCGAATTCGCGCAGGATCGGAAGCAAGCCGCCGATTTCGCCGCGGA GGCCCGCAAGAAGAACCGCATTTCGATCGACCCCAAGCGTGGAGATCGCGCCTTCCTCCTCGTCGGTGACACGGCCTGGC CTTTCTCCGTGCCGCTCGTGAAGCAGGGCGGCAAATGGTATTTCGACAGCAGGACCGGCCGCCAGGAACTGTTGTATCGC CGCATCGGAGCGAACGAGCTCGACGCCGTACAAATCTGCCGCGGGTATGTGGACGCGCAGCAGGAATATGCCCTTGAACC GAGGGGCCTCTACGACGTAAATCAGTACGCTCAACGCATCGTCAGCAGTCCCGGCAAACAGGATGGCCTGGCCTGGCAAA ACCCTGATGGCACATGGGCCGGTCCTATCGGCGAGAATATCGCTCGAGCGCTCGAACAGGGCTACACCAGCGGCGCTGAG CCTTATCATGGCTACTTCTTCAAGATCCTGAAGGGGCAGGGACCGGCCGCTCCTCTCGGCAAACTGGACTTTGTCGTGGA GGGAGCGATGATCGGCGGTTTTGCTCTTGCCGCTGCACCCGCTGAGTATGGTGTTACCGGTGTGCGGACCTTTATCGTCA GCCACGACGGCGTGGTCTACGAGAAGGACCTCGGGCCGGCAACCCTCGATGCATTTAAAAAGTTGGAGCGTTTCAACCCT GATGCATCCTGGAAACCGGTCCAGGCGGAAGAGGAATAA
Upstream 100 bases:
>100_bases GTGGCGGTGGTTTCCGTGGCGGCGGTGGCGGACGCCGGGGCGGAGGCGGACGGCGCCGTTAGCGGGGCGAATCTCAGAAA GGCAATCGCAGGAGCAATAT
Downstream 100 bases:
>100_bases AGCTCCGCTTGTGACGTGAACAGTCTGGCAGGCCCCGCCTGCGCTCAACAGTTCTCGCCCTGTCTCCCGACGAATGATTC GGACTACGCAGCCGTCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MRYVFANPKRPGHVSILLAAALACASAWALLAVPSSGASAARHTIAGSPQGAKGFDTPQRAADALVDAAGKFDVAALAEI FGPEGDDVVFTGEFAQDRKQAADFAAEARKKNRISIDPKRGDRAFLLVGDTAWPFSVPLVKQGGKWYFDSRTGRQELLYR RIGANELDAVQICRGYVDAQQEYALEPRGLYDVNQYAQRIVSSPGKQDGLAWQNPDGTWAGPIGENIARALEQGYTSGAE PYHGYFFKILKGQGPAAPLGKLDFVVEGAMIGGFALAAAPAEYGVTGVRTFIVSHDGVVYEKDLGPATLDAFKKLERFNP DASWKPVQAEEE
Sequences:
>Translated_332_residues MRYVFANPKRPGHVSILLAAALACASAWALLAVPSSGASAARHTIAGSPQGAKGFDTPQRAADALVDAAGKFDVAALAEI FGPEGDDVVFTGEFAQDRKQAADFAAEARKKNRISIDPKRGDRAFLLVGDTAWPFSVPLVKQGGKWYFDSRTGRQELLYR RIGANELDAVQICRGYVDAQQEYALEPRGLYDVNQYAQRIVSSPGKQDGLAWQNPDGTWAGPIGENIARALEQGYTSGAE PYHGYFFKILKGQGPAAPLGKLDFVVEGAMIGGFALAAAPAEYGVTGVRTFIVSHDGVVYEKDLGPATLDAFKKLERFNP DASWKPVQAEEE >Mature_332_residues MRYVFANPKRPGHVSILLAAALACASAWALLAVPSSGASAARHTIAGSPQGAKGFDTPQRAADALVDAAGKFDVAALAEI FGPEGDDVVFTGEFAQDRKQAADFAAEARKKNRISIDPKRGDRAFLLVGDTAWPFSVPLVKQGGKWYFDSRTGRQELLYR RIGANELDAVQICRGYVDAQQEYALEPRGLYDVNQYAQRIVSSPGKQDGLAWQNPDGTWAGPIGENIARALEQGYTSGAE PYHGYFFKILKGQGPAAPLGKLDFVVEGAMIGGFALAAAPAEYGVTGVRTFIVSHDGVVYEKDLGPATLDAFKKLERFNP DASWKPVQAEEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35697; Mature: 35697
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYVFANPKRPGHVSILLAAALACASAWALLAVPSSGASAARHTIAGSPQGAKGFDTPQR CCEEECCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCCCCHHH AADALVDAAGKFDVAALAEIFGPEGDDVVFTGEFAQDRKQAADFAAEARKKNRISIDPKR HHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEECCCC GDRAFLLVGDTAWPFSVPLVKQGGKWYFDSRTGRQELLYRRIGANELDAVQICRGYVDAQ CCEEEEEECCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCH QEYALEPRGLYDVNQYAQRIVSSPGKQDGLAWQNPDGTWAGPIGENIARALEQGYTSGAE HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCC PYHGYFFKILKGQGPAAPLGKLDFVVEGAMIGGFALAAAPAEYGVTGVRTFIVSHDGVVY CCCCEEEEEEECCCCCCCCCCCHHEEECHHHCCHHHHHCCHHHCHHHEEEEEEECCCEEE EKDLGPATLDAFKKLERFNPDASWKPVQAEEE ECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRYVFANPKRPGHVSILLAAALACASAWALLAVPSSGASAARHTIAGSPQGAKGFDTPQR CCEEECCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCCCCHHH AADALVDAAGKFDVAALAEIFGPEGDDVVFTGEFAQDRKQAADFAAEARKKNRISIDPKR HHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEECCCC GDRAFLLVGDTAWPFSVPLVKQGGKWYFDSRTGRQELLYRRIGANELDAVQICRGYVDAQ CCEEEEEECCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCH QEYALEPRGLYDVNQYAQRIVSSPGKQDGLAWQNPDGTWAGPIGENIARALEQGYTSGAE HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCC PYHGYFFKILKGQGPAAPLGKLDFVVEGAMIGGFALAAAPAEYGVTGVRTFIVSHDGVVY CCCCEEEEEEECCCCCCCCCCCHHEEECHHHCCHHHHHCCHHHCHHHEEEEEEECCCEEE EKDLGPATLDAFKKLERFNPDASWKPVQAEEE ECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA