| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624481
Identifier: 116624481
GI number: 116624481
Start: 6768687
End: 6769685
Strand: Reverse
Name: 116624481
Synonym: Acid_5403
Alternate gene names: NA
Gene position: 6769685-6768687 (Counterclockwise)
Preceding gene: 116624482
Following gene: 116624480
Centisome position: 67.93
GC content: 58.46
Gene sequence:
>999_bases ATGATTCGGACTACGCAGCCGTCGTCGTGGATGATGATGCTACCGCTTTCCAACGTGCAGCGTCCGATCATCGGGTATGA TCCTGCGACTTACGAGCACGGGAAGACGGTTGCGCTCCCCGGTCAGCGTAGTGTGCCGAAAGTCAAGTCAATCCACGGTA GGGTCACGAAGTTTGTTCCATTACTCCTCGCGGCCCGAAATAGTAAATCGGCGACCCGGCGGGTGCATCGCTTTTTTGGG ATGATCAAATTCCGAAATTTCGTGTTGGTCTTCGGGCTGTGGTCGGGGATGCTCGCCTCGGCGCAATCGGGAACGGGTGG CGATTGGCACATGTCGGTGAGCCCGTATCTTTGGTTTCCCGGAGTACACGGGACCTTAGGCGCGTTCGACCGCGACGCCA GCGTGTCTGCGAGCGCAATCGATCTGCTTTCGCATTTCCGCTTTGGCCTGATGGGGACTGCCGAAGCTCGCCGGGGACGG TTGCTCTTCCCGGTTGACGTGTTCTGGGTCAGGCTCGCGGATGACAAAGCGGTGACGAGGCTGGGCCTCGCGGCCACGAC GGCGGACGTGAAAGCGAGCCTGTTTATACTAACGCCGAAGATTGGCGTGCGCCTGCTCGACGAGCCAAAGATCAAGTGCG ATTTCCTGACCGGAGTGCGATACTGGCACCTCGGACAGACCCTGAATTTCAATCGCTCCGACCTTAGTTTTTCCACCGGC CAGAATTGGGTGGATCCGTTGGTGGGAGGGAGAATCGAGTCGCCGCTCTCGTCGAAGTTCGTCGCCACTGTTTTCGGCGA TGTTGGCGGATGGGGGACCGGTTCTCAACTGGAATATCAGGTGGGTGGCGTTCTGGGCTACAAAGTGAACGAGACGGCAA CATTGCAGGCGGGGTATCGTTATCTGGCCGTGGATTACCGCGGAGGCGGCGTCAGGCAACCCGTTTTCGATGGACACCTG TCTGGCGTCGTGCTCGGCGTTACCTTCAATCTCAAGTAA
Upstream 100 bases:
>100_bases AAACCGGTCCAGGCGGAAGAGGAATAAAGCTCCGCTTGTGACGTGAACAGTCTGGCAGGCCCCGCCTGCGCTCAACAGTT CTCGCCCTGTCTCCCGACGA
Downstream 100 bases:
>100_bases GGCTCACCGTCGCAATTCGTCAGTGAGGTGAACCATATGCAGATGATGCGCTTTTGTTTCCAGGTGCTCGCTTGCGCAAG TCTGTTATCCGCACAGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MIRTTQPSSWMMMLPLSNVQRPIIGYDPATYEHGKTVALPGQRSVPKVKSIHGRVTKFVPLLLAARNSKSATRRVHRFFG MIKFRNFVLVFGLWSGMLASAQSGTGGDWHMSVSPYLWFPGVHGTLGAFDRDASVSASAIDLLSHFRFGLMGTAEARRGR LLFPVDVFWVRLADDKAVTRLGLAATTADVKASLFILTPKIGVRLLDEPKIKCDFLTGVRYWHLGQTLNFNRSDLSFSTG QNWVDPLVGGRIESPLSSKFVATVFGDVGGWGTGSQLEYQVGGVLGYKVNETATLQAGYRYLAVDYRGGGVRQPVFDGHL SGVVLGVTFNLK
Sequences:
>Translated_332_residues MIRTTQPSSWMMMLPLSNVQRPIIGYDPATYEHGKTVALPGQRSVPKVKSIHGRVTKFVPLLLAARNSKSATRRVHRFFG MIKFRNFVLVFGLWSGMLASAQSGTGGDWHMSVSPYLWFPGVHGTLGAFDRDASVSASAIDLLSHFRFGLMGTAEARRGR LLFPVDVFWVRLADDKAVTRLGLAATTADVKASLFILTPKIGVRLLDEPKIKCDFLTGVRYWHLGQTLNFNRSDLSFSTG QNWVDPLVGGRIESPLSSKFVATVFGDVGGWGTGSQLEYQVGGVLGYKVNETATLQAGYRYLAVDYRGGGVRQPVFDGHL SGVVLGVTFNLK >Mature_332_residues MIRTTQPSSWMMMLPLSNVQRPIIGYDPATYEHGKTVALPGQRSVPKVKSIHGRVTKFVPLLLAARNSKSATRRVHRFFG MIKFRNFVLVFGLWSGMLASAQSGTGGDWHMSVSPYLWFPGVHGTLGAFDRDASVSASAIDLLSHFRFGLMGTAEARRGR LLFPVDVFWVRLADDKAVTRLGLAATTADVKASLFILTPKIGVRLLDEPKIKCDFLTGVRYWHLGQTLNFNRSDLSFSTG QNWVDPLVGGRIESPLSSKFVATVFGDVGGWGTGSQLEYQVGGVLGYKVNETATLQAGYRYLAVDYRGGGVRQPVFDGHL SGVVLGVTFNLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36404; Mature: 36404
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTTQPSSWMMMLPLSNVQRPIIGYDPATYEHGKTVALPGQRSVPKVKSIHGRVTKFVP CCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHH LLLAARNSKSATRRVHRFFGMIKFRNFVLVFGLWSGMLASAQSGTGGDWHMSVSPYLWFP HHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHCCCCCCCCCEEEECCCEEECC GVHGTLGAFDRDASVSASAIDLLSHFRFGLMGTAEARRGRLLFPVDVFWVRLADDKAVTR CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCEEEEEEEEEEEECCCCHHHH LGLAATTADVKASLFILTPKIGVRLLDEPKIKCDFLTGVRYWHLGQTLNFNRSDLSFSTG HCEEEECCCCEEEEEEEECCCCEEEECCCCEEEEEECCEEEEECCCEECCCCCCCCCCCC QNWVDPLVGGRIESPLSSKFVATVFGDVGGWGTGSQLEYQVGGVLGYKVNETATLQAGYR CCHHHHHHCCCCCCCCHHCEEEEECCCCCCCCCCCEEEEEECCEEEEEECCCEEEECCCE YLAVDYRGGGVRQPVFDGHLSGVVLGVTFNLK EEEEEECCCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MIRTTQPSSWMMMLPLSNVQRPIIGYDPATYEHGKTVALPGQRSVPKVKSIHGRVTKFVP CCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHH LLLAARNSKSATRRVHRFFGMIKFRNFVLVFGLWSGMLASAQSGTGGDWHMSVSPYLWFP HHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHCCCCCCCCCEEEECCCEEECC GVHGTLGAFDRDASVSASAIDLLSHFRFGLMGTAEARRGRLLFPVDVFWVRLADDKAVTR CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCEEEEEEEEEEEECCCCHHHH LGLAATTADVKASLFILTPKIGVRLLDEPKIKCDFLTGVRYWHLGQTLNFNRSDLSFSTG HCEEEECCCCEEEEEEEECCCCEEEECCCCEEEEEECCEEEEECCCEECCCCCCCCCCCC QNWVDPLVGGRIESPLSSKFVATVFGDVGGWGTGSQLEYQVGGVLGYKVNETATLQAGYR CCHHHHHHCCCCCCCCHHCEEEEECCCCCCCCCCCEEEEEECCEEEEEECCCEEEECCCE YLAVDYRGGGVRQPVFDGHLSGVVLGVTFNLK EEEEEECCCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA