Click here to switch to the map view.

The map label for this gene is 116624351

Identifier: 116624351

GI number: 116624351

Start: 6609079

End: 6609468

Strand: Direct

Name: 116624351

Synonym: Acid_5271

Alternate gene names: NA

Gene position: 6609079-6609468 (Clockwise)

Preceding gene: 116624350

Following gene: 116624353

Centisome position: 66.32

GC content: 53.33

Gene sequence:

>390_bases
ATGAAAAGCTCACGATTCCTATTAGCGCCGGCATTTCTGATCGCCGGCGCCCTGTTTGCGCAGGACGCTCAAGTCACAGC
CCTCATGTCGAAAGATCTTCCGGAGTGTCCGGGCAAGGAAGCTCTCATGATCACGGTGGTGTATCCTCCCGGCTCTTCCG
ACCCGATTCACCGTCACAATGCGCATGCATTCGTTTATGTCTTGGAAGGCACCATCGTGATGCAGTTGAAAGGCGGCAAA
GAGGTCACTCTCACGCCGGGCCAGACCTTTTATGAAGGTCCGAATGATGTTCATCTGGTTGGCCGGAACGCAAGCACCAC
GAAACCGGCTAAGTTTGTGGTGTTCTTAGTGAAGAACAAGGATGCTCCGGTGGTGATACCGGTCAAATAA

Upstream 100 bases:

>100_bases
GCGGCTCGGCGAGTCCCGTTTCGGAGAGTGGCTGATTCACGCAACCCAACAAGTCCAAAAAATGGGAGAGCAGTCCGCTT
AAGTGCGAGGGAGGCGAACC

Downstream 100 bases:

>100_bases
TCCAAGGGGATCAGGTTATCGCTGGGGCAGATCCCTGGCTAGGAGTCCACTCGCTCTGGCGCCCAATCTTCCAACTCGTC
CCGGTCGATACGGTCTTCGC

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Region; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin Domain-Containing Protein; Cupin 2 Barrel; Cupin Domain-Containing

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKSSRFLLAPAFLIAGALFAQDAQVTALMSKDLPECPGKEALMITVVYPPGSSDPIHRHNAHAFVYVLEGTIVMQLKGGK
EVTLTPGQTFYEGPNDVHLVGRNASTTKPAKFVVFLVKNKDAPVVIPVK

Sequences:

>Translated_129_residues
MKSSRFLLAPAFLIAGALFAQDAQVTALMSKDLPECPGKEALMITVVYPPGSSDPIHRHNAHAFVYVLEGTIVMQLKGGK
EVTLTPGQTFYEGPNDVHLVGRNASTTKPAKFVVFLVKNKDAPVVIPVK
>Mature_129_residues
MKSSRFLLAPAFLIAGALFAQDAQVTALMSKDLPECPGKEALMITVVYPPGSSDPIHRHNAHAFVYVLEGTIVMQLKGGK
EVTLTPGQTFYEGPNDVHLVGRNASTTKPAKFVVFLVKNKDAPVVIPVK

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13902; Mature: 13902

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSRFLLAPAFLIAGALFAQDAQVTALMSKDLPECPGKEALMITVVYPPGSSDPIHRHN
CCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCC
AHAFVYVLEGTIVMQLKGGKEVTLTPGQTFYEGPNDVHLVGRNASTTKPAKFVVFLVKNK
CEEEEEEECCEEEEEECCCCEEEECCCCCEECCCCEEEEEECCCCCCCCCEEEEEEEECC
DAPVVIPVK
CCCEEEEEC
>Mature Secondary Structure
MKSSRFLLAPAFLIAGALFAQDAQVTALMSKDLPECPGKEALMITVVYPPGSSDPIHRHN
CCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCC
AHAFVYVLEGTIVMQLKGGKEVTLTPGQTFYEGPNDVHLVGRNASTTKPAKFVVFLVKNK
CEEEEEEECCEEEEEECCCCEEEECCCCCEECCCCEEEEEECCCCCCCCCEEEEEEEECC
DAPVVIPVK
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA