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The map label for this gene is 116624350

Identifier: 116624350

GI number: 116624350

Start: 6608281

End: 6609060

Strand: Direct

Name: 116624350

Synonym: Acid_5270

Alternate gene names: NA

Gene position: 6608281-6609060 (Clockwise)

Preceding gene: 116624346

Following gene: 116624351

Centisome position: 66.31

GC content: 58.33

Gene sequence:

>780_bases
ATGAAAATCGTAGTAATGGGCGGTACCGGGCTCATTGGATCCAGGCTTGTCAAGAAGCTTGGCGAACACGGGCACGAAGC
TGTAGCTGCGTCGCCGAGTTCCGGTGTCAACAGTCTTACCGGCGAGGGACTCGCGGGTGCATTAAAAGGAGCTTCGGTAA
TCGTAGATGTCACGAACGCACCCTCATGGGAGGATTCGGCGGTGCTGAATTTCTTCGAGACGTCAACCCGGAATCTGCTC
GCCAATGGAGCGGCCGCCGGCGTTGGACAGTACGTTGCGCTGTCGGTCGTGGGAACGGAGCGTCTGCTCGAAAGCGGGTA
CTTCCGAGCAAAACTCGCGCAGGAGAACTTGATCAAGGCCTCCTCGATTCCCCATTCAATCGTGCGCGCGACCCAGTTCT
TCGAGTTCGTGAAGCAGATCGCCGATTATTCCACCGAGGGCAACAAAGTACGCCTGCCTCCGGCGCTCATCCAGCCCATG
GCAGCCGACGATGTGGCCAGTGCCCTAGCCGGCATCGCTGTGAGTTCACCCGTGAATGGCACCGTTGAAGTCGCGGGACC
GGAAAAGTTTCGTCTCGATGAACTCGTGCGGCGCGACCTGACGGCGCTTCACGATCCCCGCGAAGTGACCACCGACCCCA
ACGGACGCTACTACGGCATCCAGATAAGTGAGAAATCGCTGGTTCCTGAAAATGACGCGCGGCTCGGCGAGTCCCGTTTC
GGAGAGTGGCTGATTCACGCAACCCAACAAGTCCAAAAAATGGGAGAGCAGTCCGCTTAA

Upstream 100 bases:

>100_bases
CCGGGGATTGCCTCGGGGCGCTAAACCAAGGGTTTAACAGGAAACTCACTCGCGTTTGGTGAACGAAGTGCACCGATAAT
AGTCGAAAGGGAGGAGAGCA

Downstream 100 bases:

>100_bases
GTGCGAGGGAGGCGAACCATGAAAAGCTCACGATTCCTATTAGCGCCGGCATTTCTGATCGCCGGCGCCCTGTTTGCGCA
GGACGCTCAAGTCACAGCCC

Product: NmrA family protein

Products: NA

Alternate protein names: NAD-Dependent Epimerase/Dehydratase; Secreted Protein; DTDP-4-Dehydrorhamnose Reductase; Nucleoside-Diphosphate Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; NmrA-Like; Nucleotide-Diphosphate-Sugar Epimerase/NmrA Family Protein; GCN5-Related N-Acetyltransferase; Transcriptional Regulator LysR-Family; LysR Family Transcriptional Regulator; NmrA-Like Protein; NADH-Ubiquinone Oxidoreductase; Nmra-Like Family Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKIVVMGGTGLIGSRLVKKLGEHGHEAVAASPSSGVNSLTGEGLAGALKGASVIVDVTNAPSWEDSAVLNFFETSTRNLL
ANGAAAGVGQYVALSVVGTERLLESGYFRAKLAQENLIKASSIPHSIVRATQFFEFVKQIADYSTEGNKVRLPPALIQPM
AADDVASALAGIAVSSPVNGTVEVAGPEKFRLDELVRRDLTALHDPREVTTDPNGRYYGIQISEKSLVPENDARLGESRF
GEWLIHATQQVQKMGEQSA

Sequences:

>Translated_259_residues
MKIVVMGGTGLIGSRLVKKLGEHGHEAVAASPSSGVNSLTGEGLAGALKGASVIVDVTNAPSWEDSAVLNFFETSTRNLL
ANGAAAGVGQYVALSVVGTERLLESGYFRAKLAQENLIKASSIPHSIVRATQFFEFVKQIADYSTEGNKVRLPPALIQPM
AADDVASALAGIAVSSPVNGTVEVAGPEKFRLDELVRRDLTALHDPREVTTDPNGRYYGIQISEKSLVPENDARLGESRF
GEWLIHATQQVQKMGEQSA
>Mature_259_residues
MKIVVMGGTGLIGSRLVKKLGEHGHEAVAASPSSGVNSLTGEGLAGALKGASVIVDVTNAPSWEDSAVLNFFETSTRNLL
ANGAAAGVGQYVALSVVGTERLLESGYFRAKLAQENLIKASSIPHSIVRATQFFEFVKQIADYSTEGNKVRLPPALIQPM
AADDVASALAGIAVSSPVNGTVEVAGPEKFRLDELVRRDLTALHDPREVTTDPNGRYYGIQISEKSLVPENDARLGESRF
GEWLIHATQQVQKMGEQSA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27470; Mature: 27470

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVVMGGTGLIGSRLVKKLGEHGHEAVAASPSSGVNSLTGEGLAGALKGASVIVDVTNA
CEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHCCCEEEEECCCC
PSWEDSAVLNFFETSTRNLLANGAAAGVGQYVALSVVGTERLLESGYFRAKLAQENLIKA
CCCCCHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHH
SSIPHSIVRATQFFEFVKQIADYSTEGNKVRLPPALIQPMAADDVASALAGIAVSSPVNG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHCCCCCCC
TVEVAGPEKFRLDELVRRDLTALHDPREVTTDPNGRYYGIQISEKSLVPENDARLGESRF
EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCHHHH
GEWLIHATQQVQKMGEQSA
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIVVMGGTGLIGSRLVKKLGEHGHEAVAASPSSGVNSLTGEGLAGALKGASVIVDVTNA
CEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHCCCEEEEECCCC
PSWEDSAVLNFFETSTRNLLANGAAAGVGQYVALSVVGTERLLESGYFRAKLAQENLIKA
CCCCCHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHH
SSIPHSIVRATQFFEFVKQIADYSTEGNKVRLPPALIQPMAADDVASALAGIAVSSPVNG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHCCCCCCC
TVEVAGPEKFRLDELVRRDLTALHDPREVTTDPNGRYYGIQISEKSLVPENDARLGESRF
EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCHHHH
GEWLIHATQQVQKMGEQSA
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA