Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116624325

Identifier: 116624325

GI number: 116624325

Start: 6578400

End: 6578753

Strand: Direct

Name: 116624325

Synonym: Acid_5243

Alternate gene names: NA

Gene position: 6578400-6578753 (Clockwise)

Preceding gene: 116624321

Following gene: 116624326

Centisome position: 66.01

GC content: 54.8

Gene sequence:

>354_bases
ATGAGAAAACTAAATCAACTGACGCGTCTCCTCGCTGCAGGATTGTTGCTGTCAGGCCTTTCTGCAGGTCTCTTTGCCCA
GGCTCAACAGGACAAGAGTGAGCGGGACCGGATGAATAACACCACCCTCACCGGTTGTCTGAGCAAGGACGCTTCGGGCG
CCTACACGTTGACCGACGAGACCACCGGTGTAAAAACGACCGTGGCCGGGGCAGCCGACCTGGAAAAATATTCCGCCAAT
AACAAGGTAACTTTGACCGGGGCAGCTAAGACGGACGCCTCCGGTAAATCCATCTTCGAGGTAAGCAAGCTCAAGCACGT
CTCCGACACCTGCAAAGTACCCTCACAGCAGTAA

Upstream 100 bases:

>100_bases
GGGGTCGCCGCATAGCGCGCACGACGATGGGTCATCGCGTCACACTGGCCCTCCCGTTGCTGCCCTCCGGACGATACGAA
ATGAGAAAGGAGTCTCATTC

Downstream 100 bases:

>100_bases
CACCTCATGTCCTCAGCCAGCTCCCTGACGGTTGCGGCCCGATGACGTGACCGTTAGGGAGTGATTCGCACGTTCAGGAA
CTTGGCATCGGCCTGCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MRKLNQLTRLLAAGLLLSGLSAGLFAQAQQDKSERDRMNNTTLTGCLSKDASGAYTLTDETTGVKTTVAGAADLEKYSAN
NKVTLTGAAKTDASGKSIFEVSKLKHVSDTCKVPSQQ

Sequences:

>Translated_117_residues
MRKLNQLTRLLAAGLLLSGLSAGLFAQAQQDKSERDRMNNTTLTGCLSKDASGAYTLTDETTGVKTTVAGAADLEKYSAN
NKVTLTGAAKTDASGKSIFEVSKLKHVSDTCKVPSQQ
>Mature_117_residues
MRKLNQLTRLLAAGLLLSGLSAGLFAQAQQDKSERDRMNNTTLTGCLSKDASGAYTLTDETTGVKTTVAGAADLEKYSAN
NKVTLTGAAKTDASGKSIFEVSKLKHVSDTCKVPSQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12325; Mature: 12325

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLNQLTRLLAAGLLLSGLSAGLFAQAQQDKSERDRMNNTTLTGCLSKDASGAYTLTDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCCCCCCCEEECCC
TTGVKTTVAGAADLEKYSANNKVTLTGAAKTDASGKSIFEVSKLKHVSDTCKVPSQQ
CCCCEEEECCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRKLNQLTRLLAAGLLLSGLSAGLFAQAQQDKSERDRMNNTTLTGCLSKDASGAYTLTDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCCCCCCCEEECCC
TTGVKTTVAGAADLEKYSANNKVTLTGAAKTDASGKSIFEVSKLKHVSDTCKVPSQQ
CCCCEEEECCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA