| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116624298
GI number: 116624298
Start: 6543208
End: 6545856
Strand: Direct
Name: macB [H]
Synonym: Acid_5216
Alternate gene names: 116624298
Gene position: 6543208-6545856 (Clockwise)
Preceding gene: 116624297
Following gene: 116624300
Centisome position: 65.66
GC content: 63.27
Gene sequence:
>2649_bases ATGACATGGTGGCGGCGTAAAGGGCGCGAGTGCGACCTGGATCGCGAGATTCGCGCCGACCTGGAATTGGAGGCCGAGGA GCAGCGTGAGAATGGTCTCTCGCCGCAAGAGGCCGAGTATGCCGCGCGGAGAGCCTTCGGCAACGTGACTTGGGTCAAGG AGGAGGTGCGCTTCATGTGGGGCTGGACGCTTTGGGAGACCATCTGGCAGGAACTCCGGTATGCCGCGCGGACTCTGCGA AAAACGCCCGGCTTCGCCGCTACCGCAATTCTGACGCTGGCGTTGGGCATCGGCGCCAGCACAGCCGTTTTTACGGTTGT GGATTCGGTGCTTCTGAAGCCGCTCACCTTTCGCGATAGCGGCCGGCTGGTGGCTTGCTGGGAGCGCGTCCGGTTTCTCC GGGACGATGCCACCGGCCCCAATCCCAGACACGTCGAGCTCTGGCGTCAGCGCACCACGGCTTTCAGCGGCTTGACGTAC TTGCAGTACGCCACGATGGGATTCACTTTAGGGGCCGAACATCCTCGCCTCACGAACGCGGTCGTATCCATTCCGAACCT GTTCGACGTTCTCCAGGTGCACGCGCAGGTCGGCCGCTTGTTTGTCCCGGAGGACGGCATCGAAGGGCACGACAGTGTCG CGGTTTTAAGCTACAAGGCTTGGCAGGAGCTGTTCCACGGCGATTTGGGAGCGATCGGCGCGACGATCCGCCTCGGCGAT GTTTCCCGCCAGATCGTGGGCGTGCTGCCGGCCAACTTTCACTTTCCGAGCAGCAGCGCCCTGCGCTCCTTCCACCACGC CGGTCAGACGATGAGCGCTACGCCCGAGCCCACTATATTCTTTCCCGCCGCCATGGACGTTACGAAATTCACATGGAATG GAAATTATGGGAATTGGGTCACACTGGGGCGGCTCAATCCCAGCGTTAACCTGGCGCAAGCTTCGGCCCAGCTCAATACG ATTCAGGCGCAAATCCTGGCCGATCCTGCCTGGCATGCCGACCGCCGCCCCGGCTCGCTCGGAGCGTGGGTGCAGCCGAT GCAAGAGGCCGTAGTCGGCGATTCGCGGACCGCCCTGTGGCTCCTGATGGCCTCCGTTCTGGGACTGGTGCTGATTGCCT GCCTGAACCTGGCAAACGCGCAACTCGGACGCGCGCTGGCGCGCCAGCGAGAATCGGCCGTGCGCATCGCATTAGGGGCC GCCAAGTGGCGGCTTGTCTGGAATGCGCTGGCCGAAAACCTGTTGCTGGCGCTGATCGGCGGCGCGGCTGGCATCTTGCT GGCGAAGGCGGCTCTGGATGTTTTCCTGCGCGAGACTCCCCTTGGCCTGCCGCGCCTCTCTGAGGTCTATCTGAACCTCA ACGTGCTGCTGTTCGCTATTCTGCTGACCTTTGCGGCAAGCCTGCTTTGCGGACTGTTGCCCGCGCTGCGCCTCCTCACG GCCGATCCGCAAGCCGCGCTGAAGCAATCGGGTACCCGCTCGATTGGAAGCCGCGAGGGCAATCGCTTGCGCCGATGGCT GATCGGTTTGCAGGTGGCGGGCTGCACCGCGTTGCTACTCGTAACCGGTCTCTTCTCCAAGAGCCTGCTCCATCTGCTGA GTGAGAACAAGGGTTTCGACACCCGCGAGCTCGTTGTGGCCGAAGTTCGACTCACGCCCCAAAGCTACGGCAAGGACCAG AACCGCCTCAATTTCGACGACGCGGTCCTCGCGAACCTACGCGCCATTGCCGGCGTTCAATCTGCTGCGCTCGTGAGCGC CATGCCGCTCGGCGGCGAGTCGTGGGTCGAGCCTGTTCAGCGTATGGACAAGCCGCAACTGGAATCGCCGCTGATCAATT TTCGCTGGGTGAGCCCCGGATATTTCGAGGTCACCAGGCAGCGGCTCGTCGCCGGACGCCTCTTCGAAGAACGCGACCGC GATCTCACCAACGTCGTGCTATCGGAGAATGAGGCCAAGGCGCTTTGGGACACGGACGACCCGATCGGCGGACACGTGAA AATCGAAGGCCGCATTTTTACGGTGATCGGGGTAGTAGCCGATTCGCGCAACACTTCGCTCAAGGCACCGCCGGCCCGTA TGGCCTACGTCCATTACAAGGATCGGCCGCCCTTTCCTACGTACTTTCTGATTCGCGCCGCAAACGTTCGGGCACTCGCC TCGGCAATCCGCCAGGCGATCTGGAAATACGATCCGGAAGTCACCATTGCACGCGTCAAGACGCTGGATGCGCAACTGAC GGATTCGCTGGCCACCGAGCGCTTCGAGACCCTGCTGCTGCTCTCCTTCGGCGGCGCCGGCCTCCTCTTGGCCACGCTCG GAATCTACGGCGTCCTGAGCTATTCGGTCGTTACGCGCAGGCAGGAAATCGGCGTCCGTATGGCGCTTGGCGCGACTCGG AGCGCTGTTTACCGGCTCACGGCCGGCGAGGCGGCCGTGCCGGTATTCGCGGGTCTGGCGACGGGATTGGCCGGGAGCCT CGCGGTCGGACGAATGATCGAAGGACTCCTCTATGGGGTTCGAGCGGTCGATCCGCTGGTCATCGCGATGGTGGCGGCGC TATTCCTCACGTCGGCCGCGGCGGCCGCATTTCTGCCCGCAAGGCGCGCCGCGTTGATCCATCCCATGGAAGCCCTGCGT TCGGAATAG
Upstream 100 bases:
>100_bases ACGGCGGCGGGCAGAAAACAGCTCGTGGCTGAGGAATCGAAATGGAGGAAACTCACGGGCGCGGTGGCGCGGATCATGTG GCCTGCCGGTGAGATCTGAG
Downstream 100 bases:
>100_bases AAGGTCTCATGCGCCGGCGCATCGGCGCCCCGCCGGGGCCTCAGATTACAGCCAAGTTGGCCAAAACGCGCAAACCGTCA TATTGATCATCCCCAAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 882; Mature: 881
Protein sequence:
>882_residues MTWWRRKGRECDLDREIRADLELEAEEQRENGLSPQEAEYAARRAFGNVTWVKEEVRFMWGWTLWETIWQELRYAARTLR KTPGFAATAILTLALGIGASTAVFTVVDSVLLKPLTFRDSGRLVACWERVRFLRDDATGPNPRHVELWRQRTTAFSGLTY LQYATMGFTLGAEHPRLTNAVVSIPNLFDVLQVHAQVGRLFVPEDGIEGHDSVAVLSYKAWQELFHGDLGAIGATIRLGD VSRQIVGVLPANFHFPSSSALRSFHHAGQTMSATPEPTIFFPAAMDVTKFTWNGNYGNWVTLGRLNPSVNLAQASAQLNT IQAQILADPAWHADRRPGSLGAWVQPMQEAVVGDSRTALWLLMASVLGLVLIACLNLANAQLGRALARQRESAVRIALGA AKWRLVWNALAENLLLALIGGAAGILLAKAALDVFLRETPLGLPRLSEVYLNLNVLLFAILLTFAASLLCGLLPALRLLT ADPQAALKQSGTRSIGSREGNRLRRWLIGLQVAGCTALLLVTGLFSKSLLHLLSENKGFDTRELVVAEVRLTPQSYGKDQ NRLNFDDAVLANLRAIAGVQSAALVSAMPLGGESWVEPVQRMDKPQLESPLINFRWVSPGYFEVTRQRLVAGRLFEERDR DLTNVVLSENEAKALWDTDDPIGGHVKIEGRIFTVIGVVADSRNTSLKAPPARMAYVHYKDRPPFPTYFLIRAANVRALA SAIRQAIWKYDPEVTIARVKTLDAQLTDSLATERFETLLLLSFGGAGLLLATLGIYGVLSYSVVTRRQEIGVRMALGATR SAVYRLTAGEAAVPVFAGLATGLAGSLAVGRMIEGLLYGVRAVDPLVIAMVAALFLTSAAAAAFLPARRAALIHPMEALR SE
Sequences:
>Translated_882_residues MTWWRRKGRECDLDREIRADLELEAEEQRENGLSPQEAEYAARRAFGNVTWVKEEVRFMWGWTLWETIWQELRYAARTLR KTPGFAATAILTLALGIGASTAVFTVVDSVLLKPLTFRDSGRLVACWERVRFLRDDATGPNPRHVELWRQRTTAFSGLTY LQYATMGFTLGAEHPRLTNAVVSIPNLFDVLQVHAQVGRLFVPEDGIEGHDSVAVLSYKAWQELFHGDLGAIGATIRLGD VSRQIVGVLPANFHFPSSSALRSFHHAGQTMSATPEPTIFFPAAMDVTKFTWNGNYGNWVTLGRLNPSVNLAQASAQLNT IQAQILADPAWHADRRPGSLGAWVQPMQEAVVGDSRTALWLLMASVLGLVLIACLNLANAQLGRALARQRESAVRIALGA AKWRLVWNALAENLLLALIGGAAGILLAKAALDVFLRETPLGLPRLSEVYLNLNVLLFAILLTFAASLLCGLLPALRLLT ADPQAALKQSGTRSIGSREGNRLRRWLIGLQVAGCTALLLVTGLFSKSLLHLLSENKGFDTRELVVAEVRLTPQSYGKDQ NRLNFDDAVLANLRAIAGVQSAALVSAMPLGGESWVEPVQRMDKPQLESPLINFRWVSPGYFEVTRQRLVAGRLFEERDR DLTNVVLSENEAKALWDTDDPIGGHVKIEGRIFTVIGVVADSRNTSLKAPPARMAYVHYKDRPPFPTYFLIRAANVRALA SAIRQAIWKYDPEVTIARVKTLDAQLTDSLATERFETLLLLSFGGAGLLLATLGIYGVLSYSVVTRRQEIGVRMALGATR SAVYRLTAGEAAVPVFAGLATGLAGSLAVGRMIEGLLYGVRAVDPLVIAMVAALFLTSAAAAAFLPARRAALIHPMEALR SE >Mature_881_residues TWWRRKGRECDLDREIRADLELEAEEQRENGLSPQEAEYAARRAFGNVTWVKEEVRFMWGWTLWETIWQELRYAARTLRK TPGFAATAILTLALGIGASTAVFTVVDSVLLKPLTFRDSGRLVACWERVRFLRDDATGPNPRHVELWRQRTTAFSGLTYL QYATMGFTLGAEHPRLTNAVVSIPNLFDVLQVHAQVGRLFVPEDGIEGHDSVAVLSYKAWQELFHGDLGAIGATIRLGDV SRQIVGVLPANFHFPSSSALRSFHHAGQTMSATPEPTIFFPAAMDVTKFTWNGNYGNWVTLGRLNPSVNLAQASAQLNTI QAQILADPAWHADRRPGSLGAWVQPMQEAVVGDSRTALWLLMASVLGLVLIACLNLANAQLGRALARQRESAVRIALGAA KWRLVWNALAENLLLALIGGAAGILLAKAALDVFLRETPLGLPRLSEVYLNLNVLLFAILLTFAASLLCGLLPALRLLTA DPQAALKQSGTRSIGSREGNRLRRWLIGLQVAGCTALLLVTGLFSKSLLHLLSENKGFDTRELVVAEVRLTPQSYGKDQN RLNFDDAVLANLRAIAGVQSAALVSAMPLGGESWVEPVQRMDKPQLESPLINFRWVSPGYFEVTRQRLVAGRLFEERDRD LTNVVLSENEAKALWDTDDPIGGHVKIEGRIFTVIGVVADSRNTSLKAPPARMAYVHYKDRPPFPTYFLIRAANVRALAS AIRQAIWKYDPEVTIARVKTLDAQLTDSLATERFETLLLLSFGGAGLLLATLGIYGVLSYSVVTRRQEIGVRMALGATRS AVYRLTAGEAAVPVFAGLATGLAGSLAVGRMIEGLLYGVRAVDPLVIAMVAALFLTSAAAAAFLPARRAALIHPMEALRS E
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 96582; Mature: 96451
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWWRRKGRECDLDREIRADLELEAEEQRENGLSPQEAEYAARRAFGNVTWVKEEVRFMW CCCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH GWTLWETIWQELRYAARTLRKTPGFAATAILTLALGIGASTAVFTVVDSVLLKPLTFRDS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCC GRLVACWERVRFLRDDATGPNPRHVELWRQRTTAFSGLTYLQYATMGFTLGAEHPRLTNA CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHH VVSIPNLFDVLQVHAQVGRLFVPEDGIEGHDSVAVLSYKAWQELFHGDLGAIGATIRLGD HHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEEEHHHHHHHHCCCHHHCCCEEEECC VSRQIVGVLPANFHFPSSSALRSFHHAGQTMSATPEPTIFFPAAMDVTKFTWNGNYGNWV HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEE TLGRLNPSVNLAQASAQLNTIQAQILADPAWHADRRPGSLGAWVQPMQEAVVGDSRTALW EEECCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH LLMASVLGLVLIACLNLANAQLGRALARQRESAVRIALGAAKWRLVWNALAENLLLALIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHH GAAGILLAKAALDVFLRETPLGLPRLSEVYLNLNVLLFAILLTFAASLLCGLLPALRLLT HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ADPQAALKQSGTRSIGSREGNRLRRWLIGLQVAGCTALLLVTGLFSKSLLHLLSENKGFD CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TRELVVAEVRLTPQSYGKDQNRLNFDDAVLANLRAIAGVQSAALVSAMPLGGESWVEPVQ HHHEEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHH RMDKPQLESPLINFRWVSPGYFEVTRQRLVAGRLFEERDRDLTNVVLSENEAKALWDTDD HCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEECCCCC PIGGHVKIEGRIFTVIGVVADSRNTSLKAPPARMAYVHYKDRPPFPTYFLIRAANVRALA CCCCEEEECCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCHHHHH SAIRQAIWKYDPEVTIARVKTLDAQLTDSLATERFETLLLLSFGGAGLLLATLGIYGVLS HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHH YSVVTRRQEIGVRMALGATRSAVYRLTAGEAAVPVFAGLATGLAGSLAVGRMIEGLLYGV HHHHHHHHHCCEEEEECCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVDPLVIAMVAALFLTSAAAAAFLPARRAALIHPMEALRSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure TWWRRKGRECDLDREIRADLELEAEEQRENGLSPQEAEYAARRAFGNVTWVKEEVRFMW CCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH GWTLWETIWQELRYAARTLRKTPGFAATAILTLALGIGASTAVFTVVDSVLLKPLTFRDS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCC GRLVACWERVRFLRDDATGPNPRHVELWRQRTTAFSGLTYLQYATMGFTLGAEHPRLTNA CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHH VVSIPNLFDVLQVHAQVGRLFVPEDGIEGHDSVAVLSYKAWQELFHGDLGAIGATIRLGD HHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEEEHHHHHHHHCCCHHHCCCEEEECC VSRQIVGVLPANFHFPSSSALRSFHHAGQTMSATPEPTIFFPAAMDVTKFTWNGNYGNWV HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEE TLGRLNPSVNLAQASAQLNTIQAQILADPAWHADRRPGSLGAWVQPMQEAVVGDSRTALW EEECCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH LLMASVLGLVLIACLNLANAQLGRALARQRESAVRIALGAAKWRLVWNALAENLLLALIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHH GAAGILLAKAALDVFLRETPLGLPRLSEVYLNLNVLLFAILLTFAASLLCGLLPALRLLT HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ADPQAALKQSGTRSIGSREGNRLRRWLIGLQVAGCTALLLVTGLFSKSLLHLLSENKGFD CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TRELVVAEVRLTPQSYGKDQNRLNFDDAVLANLRAIAGVQSAALVSAMPLGGESWVEPVQ HHHEEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHH RMDKPQLESPLINFRWVSPGYFEVTRQRLVAGRLFEERDRDLTNVVLSENEAKALWDTDD HCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEECCCCC PIGGHVKIEGRIFTVIGVVADSRNTSLKAPPARMAYVHYKDRPPFPTYFLIRAANVRALA CCCCEEEECCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCHHHHH SAIRQAIWKYDPEVTIARVKTLDAQLTDSLATERFETLLLLSFGGAGLLLATLGIYGVLS HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHH YSVVTRRQEIGVRMALGATRSAVYRLTAGEAAVPVFAGLATGLAGSLAVGRMIEGLLYGV HHHHHHHHHCCEEEEECCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVDPLVIAMVAALFLTSAAAAAFLPARRAALIHPMEALRSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA