| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624300
Identifier: 116624300
GI number: 116624300
Start: 6549367
End: 6550494
Strand: Direct
Name: 116624300
Synonym: Acid_5218
Alternate gene names: NA
Gene position: 6549367-6550494 (Clockwise)
Preceding gene: 116624298
Following gene: 116624302
Centisome position: 65.72
GC content: 57.54
Gene sequence:
>1128_bases ATGTTCAAAGAGAATTGCTCATACATTTCAGCGGTGCTCGTTCTGACGTGCGTGCTCGGCGTTCCGGCCGCGGAGGCCCA GGGCACGGGATGTTATACCCTGGAGAGCTTGCAGGGCTCGTTTGGGATTATCGGCACGTATGGCAGCAACATCGCAGTCG CGCTAGGGACGAGAACCAACGATGCAGCCGGCAATCTGACGGGAACTTTCGTCCTCAATTCGCCCACAGTAGGGTCTGCC ACCGGAGCGAGAACGGTGGCGTCCGGCACGAATAAGGGTACCTTCACCGTGAATTGCGATGGCACCGGCGTGGTCACGCG CATCGCTACGCTTGCGGACGGCACTACGGCACCGGCCTTCGATGATTTCGTCATCACCGGGGCCGTTGTGCAAAACGGGA AGCTCATCGCCACGACCATCGAAGACGCTCAGCGAGTCCCCAGCACTCTTATCCCGGGTGGTCTCTTTTTGACTCGTAAG TATACTCGTCGCCCCAATTCTCAAACCGCCGGATGTTATACCCTGGAAAGTCTGCAGGGCTCGTATGGGGTTGTAGTGAA CTATGATTCGAATCTCGCGATGGGACTTCAACCGGAGTACCTGGATGGACTGGGAAACCTCCGGCGAACCGGCATCAACA ACCAACCTCTGACGGGATCGACAACCGGAGAAAGAACAATCGGGAACGTCACGAGTGCGGGGACCTACGTTGTGAACTGC AATGGCTCCGGCACCATCACCCGCGTGGTGACGCGAGCAGATGGCAGCAAGGCCACCACAGCGGATGATTTTCTGATCCT CGAAGGAGTTGAGCAAGACGGGAAGATAATCGCCACCACGATCTTTGACGCCCAACAAGGTCCCGCCGTGGTTGGCGCCG GAACTGCCTTCGTGACCCGCATACACACACTGCACCCCAATCACAGTGCGGCGCTGGAGGCCCAACTTCAGCTTTCAGTT TGCGGCACCGCCGCTCCCACTCCGTCGTGTACCACATCAGTAAGTGTGTGGAACTACTATCTGGTGAACCAGATTGACCC GAAGGCGCCAGCGTTTTATTTGGGCAACGGCACTCAGTCGATGGGTGTGCAGCAGTATTTGTTGGCGAGGGCTGCTGCAG GATTGTAA
Upstream 100 bases:
>100_bases AGGAAATCGTGCGCGCTGCTTCAGTGTCCTTTCGGGCGTTTAGCAGAAGGGGTGCGCAGTCCGGCAGGGGACAATTCAAT CCACGTGGAGAGGAGAAATC
Downstream 100 bases:
>100_bases GTCGCCGAGGGAGGCGGCGATTGCTCCTGGAGTCGTCGCTCCAGCTGATTTCCTTCAGGCCTGGTTGGCGAGTTGCCCGT ACAGCCACGCGCGAGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MFKENCSYISAVLVLTCVLGVPAAEAQGTGCYTLESLQGSFGIIGTYGSNIAVALGTRTNDAAGNLTGTFVLNSPTVGSA TGARTVASGTNKGTFTVNCDGTGVVTRIATLADGTTAPAFDDFVITGAVVQNGKLIATTIEDAQRVPSTLIPGGLFLTRK YTRRPNSQTAGCYTLESLQGSYGVVVNYDSNLAMGLQPEYLDGLGNLRRTGINNQPLTGSTTGERTIGNVTSAGTYVVNC NGSGTITRVVTRADGSKATTADDFLILEGVEQDGKIIATTIFDAQQGPAVVGAGTAFVTRIHTLHPNHSAALEAQLQLSV CGTAAPTPSCTTSVSVWNYYLVNQIDPKAPAFYLGNGTQSMGVQQYLLARAAAGL
Sequences:
>Translated_375_residues MFKENCSYISAVLVLTCVLGVPAAEAQGTGCYTLESLQGSFGIIGTYGSNIAVALGTRTNDAAGNLTGTFVLNSPTVGSA TGARTVASGTNKGTFTVNCDGTGVVTRIATLADGTTAPAFDDFVITGAVVQNGKLIATTIEDAQRVPSTLIPGGLFLTRK YTRRPNSQTAGCYTLESLQGSYGVVVNYDSNLAMGLQPEYLDGLGNLRRTGINNQPLTGSTTGERTIGNVTSAGTYVVNC NGSGTITRVVTRADGSKATTADDFLILEGVEQDGKIIATTIFDAQQGPAVVGAGTAFVTRIHTLHPNHSAALEAQLQLSV CGTAAPTPSCTTSVSVWNYYLVNQIDPKAPAFYLGNGTQSMGVQQYLLARAAAGL >Mature_375_residues MFKENCSYISAVLVLTCVLGVPAAEAQGTGCYTLESLQGSFGIIGTYGSNIAVALGTRTNDAAGNLTGTFVLNSPTVGSA TGARTVASGTNKGTFTVNCDGTGVVTRIATLADGTTAPAFDDFVITGAVVQNGKLIATTIEDAQRVPSTLIPGGLFLTRK YTRRPNSQTAGCYTLESLQGSYGVVVNYDSNLAMGLQPEYLDGLGNLRRTGINNQPLTGSTTGERTIGNVTSAGTYVVNC NGSGTITRVVTRADGSKATTADDFLILEGVEQDGKIIATTIFDAQQGPAVVGAGTAFVTRIHTLHPNHSAALEAQLQLSV CGTAAPTPSCTTSVSVWNYYLVNQIDPKAPAFYLGNGTQSMGVQQYLLARAAAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38693; Mature: 38693
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKENCSYISAVLVLTCVLGVPAAEAQGTGCYTLESLQGSFGIIGTYGSNIAVALGTRTN CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCC DAAGNLTGTFVLNSPTVGSATGARTVASGTNKGTFTVNCDGTGVVTRIATLADGTTAPAF CCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCC DDFVITGAVVQNGKLIATTIEDAQRVPSTLIPGGLFLTRKYTRRPNSQTAGCYTLESLQG CCEEEEEEEEECCEEEEEEHHHHHHCCHHHCCCCEEEEEHHHCCCCCCCCCEEEEECCCC SYGVVVNYDSNLAMGLQPEYLDGLGNLRRTGINNQPLTGSTTGERTIGNVTSAGTYVVNC CCCEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEEEE NGSGTITRVVTRADGSKATTADDFLILEGVEQDGKIIATTIFDAQQGPAVVGAGTAFVTR CCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCEEEECCCEEEEE IHTLHPNHSAALEAQLQLSVCGTAAPTPSCTTSVSVWNYYLVNQIDPKAPAFYLGNGTQS EEEECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEECCCCHH MGVQQYLLARAAAGL HHHHHHHHHHHHCCC >Mature Secondary Structure MFKENCSYISAVLVLTCVLGVPAAEAQGTGCYTLESLQGSFGIIGTYGSNIAVALGTRTN CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCC DAAGNLTGTFVLNSPTVGSATGARTVASGTNKGTFTVNCDGTGVVTRIATLADGTTAPAF CCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCC DDFVITGAVVQNGKLIATTIEDAQRVPSTLIPGGLFLTRKYTRRPNSQTAGCYTLESLQG CCEEEEEEEEECCEEEEEEHHHHHHCCHHHCCCCEEEEEHHHCCCCCCCCCEEEEECCCC SYGVVVNYDSNLAMGLQPEYLDGLGNLRRTGINNQPLTGSTTGERTIGNVTSAGTYVVNC CCCEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEEEE NGSGTITRVVTRADGSKATTADDFLILEGVEQDGKIIATTIFDAQQGPAVVGAGTAFVTR CCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCEEEECCCEEEEE IHTLHPNHSAALEAQLQLSVCGTAAPTPSCTTSVSVWNYYLVNQIDPKAPAFYLGNGTQS EEEECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEECCCCHH MGVQQYLLARAAAGL HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA