| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is hemH [H]
Identifier: 116624285
GI number: 116624285
Start: 6529864
End: 6530709
Strand: Direct
Name: hemH [H]
Synonym: Acid_5203
Alternate gene names: 116624285
Gene position: 6529864-6530709 (Clockwise)
Preceding gene: 116624284
Following gene: 116624286
Centisome position: 65.52
GC content: 64.54
Gene sequence:
>846_bases GTGAAATCCGCGGTCCTGCTGCTCGCCCACGGAGCGCCGGAACGCATTGAGGACGTGGAGCGTTACCTCGCGTTCGTACG CGGCGGACAGGTCGTCTCGCCGCGCGTCCTGGAAGAAGTCACCAGCCGCTACGCCGCTATCGGCGGCAGCTCGCCCTTGA CGCTGTGGACGCGCGCGCAAGCCGAAGCGCTCGAAACCATGCTCGGAATCCCCGTATTTTTCGGGATGAGAAATTGGCAT CCGTTCGTCAAAGAGACAATGGATCAAGTGCGCGCCGCGGGCGTGGGTCGTCTGGCCTGCCTTTGCCTGGCGCCGCAGTA TTCCGAGATGAGCGTCGGTCTCTACATGAAGCACGCGCGCGAAGCCGCGGGTGCGATCGAGCTGGCCTGGGCGCACAGTT ACCACGATGAACCGCTATTGATCGAGGCCTTCGCGGAGCGCCTTCAGGGCATGTCCGGCAAGGTGCTCTTCACGGCGCAC AGTCTTCCCTCGCCCAACGAAATCTACGATGCCGAATCGCGCGCTACCGCGAGCGCCGTCGCGGCAAAACTCGGGCTCGC CGATTGGGAATTCGCCTACCAAAGCCAGGGCATGAGCGGCGGCACCTGGCTTGGACCGACGGTGGAAAGCTGCATCGAGC GCTACGCCGCCGCGGGCATCCGCGACCTGGTGATCGCGCCCATCGGTTTCGTCTGCGACCACGTCGAGGTCCTGTACGAT ATCGACGTGCACTTCCGCGATTTCGCTGCCGCGCGCGGCATACGGATCAGGCGCCCGGAAAGCCTCAATGGCTCGCCGTT ATTCACGCGGGCACTGGCCAAGGTAGCCGGCACATGCCTCGCGTAG
Upstream 100 bases:
>100_bases CACGCCCGGGCCATATCTTCAATCTCGGCCACGGCATTCTGCCGGAAACCCCGGTGGAGAACGTGAAGGCCGTGGTGGAG CTGGTCCGGGAATTCCGGCC
Downstream 100 bases:
>100_bases TCATCGTCGGTGGAGGCATTTCCGGTCTTTCCGCGGCGTATTATCTGGCGAAGGGCGGAGTCTCCTCCACCATCATCGAA TCGCGGCCGCGCCTGGGCGG
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKSAVLLLAHGAPERIEDVERYLAFVRGGQVVSPRVLEEVTSRYAAIGGSSPLTLWTRAQAEALETMLGIPVFFGMRNWH PFVKETMDQVRAAGVGRLACLCLAPQYSEMSVGLYMKHAREAAGAIELAWAHSYHDEPLLIEAFAERLQGMSGKVLFTAH SLPSPNEIYDAESRATASAVAAKLGLADWEFAYQSQGMSGGTWLGPTVESCIERYAAAGIRDLVIAPIGFVCDHVEVLYD IDVHFRDFAAARGIRIRRPESLNGSPLFTRALAKVAGTCLA
Sequences:
>Translated_281_residues MKSAVLLLAHGAPERIEDVERYLAFVRGGQVVSPRVLEEVTSRYAAIGGSSPLTLWTRAQAEALETMLGIPVFFGMRNWH PFVKETMDQVRAAGVGRLACLCLAPQYSEMSVGLYMKHAREAAGAIELAWAHSYHDEPLLIEAFAERLQGMSGKVLFTAH SLPSPNEIYDAESRATASAVAAKLGLADWEFAYQSQGMSGGTWLGPTVESCIERYAAAGIRDLVIAPIGFVCDHVEVLYD IDVHFRDFAAARGIRIRRPESLNGSPLFTRALAKVAGTCLA >Mature_281_residues MKSAVLLLAHGAPERIEDVERYLAFVRGGQVVSPRVLEEVTSRYAAIGGSSPLTLWTRAQAEALETMLGIPVFFGMRNWH PFVKETMDQVRAAGVGRLACLCLAPQYSEMSVGLYMKHAREAAGAIELAWAHSYHDEPLLIEAFAERLQGMSGKVLFTAH SLPSPNEIYDAESRATASAVAAKLGLADWEFAYQSQGMSGGTWLGPTVESCIERYAAAGIRDLVIAPIGFVCDHVEVLYD IDVHFRDFAAARGIRIRRPESLNGSPLFTRALAKVAGTCLA
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=318, Percent_Identity=26.7295597484277, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI60499021, Length=318, Percent_Identity=26.7295597484277, Blast_Score=117, Evalue=9e-27, Organism=Saccharomyces cerevisiae, GI6324750, Length=329, Percent_Identity=24.0121580547112, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI17864156, Length=323, Percent_Identity=27.8637770897833, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI45552018, Length=160, Percent_Identity=33.125, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24651774, Length=254, Percent_Identity=26.3779527559055, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 30583; Mature: 30583
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAVLLLAHGAPERIEDVERYLAFVRGGQVVSPRVLEEVTSRYAAIGGSSPLTLWTRAQ CCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHH AEALETMLGIPVFFGMRNWHPFVKETMDQVRAAGVGRLACLCLAPQYSEMSVGLYMKHAR HHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHH EAAGAIELAWAHSYHDEPLLIEAFAERLQGMSGKVLFTAHSLPSPNEIYDAESRATASAV HHCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCHHHHHHHHH AAKLGLADWEFAYQSQGMSGGTWLGPTVESCIERYAAAGIRDLVIAPIGFVCDHVEVLYD HHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC IDVHFRDFAAARGIRIRRPESLNGSPLFTRALAKVAGTCLA CCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSAVLLLAHGAPERIEDVERYLAFVRGGQVVSPRVLEEVTSRYAAIGGSSPLTLWTRAQ CCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHH AEALETMLGIPVFFGMRNWHPFVKETMDQVRAAGVGRLACLCLAPQYSEMSVGLYMKHAR HHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHH EAAGAIELAWAHSYHDEPLLIEAFAERLQGMSGKVLFTAHSLPSPNEIYDAESRATASAV HHCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCHHHHHHHHH AAKLGLADWEFAYQSQGMSGGTWLGPTVESCIERYAAAGIRDLVIAPIGFVCDHVEVLYD HHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC IDVHFRDFAAARGIRIRRPESLNGSPLFTRALAKVAGTCLA CCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA