| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624163
Identifier: 116624163
GI number: 116624163
Start: 6415676
End: 6416437
Strand: Reverse
Name: 116624163
Synonym: Acid_5079
Alternate gene names: NA
Gene position: 6416437-6415676 (Counterclockwise)
Preceding gene: 116624164
Following gene: 116624159
Centisome position: 64.39
GC content: 65.22
Gene sequence:
>762_bases ATGCCGGACCTCAAAGCCTTACAGGGCACCTGGAAGATCGTGTCGCTCGAAATGGACGGGAGCGCTATGCCATCGGGCGA GGCCTCGATCATCGTGAAGGGTTCCCGCTTCACCACCACCGCCATGGGCGGCGAATATTCGGGCGCGATCGAGGTGGATG AGACTACGTCGCCGAAGAGTTTCAACCTGCGCTTCGATGCGGGCCCCGAAACCGGCAACACCTCGTACGGCATCTACGAA CTCTCCCGCGACAGCTGGAAGATCTGCCTCACCCTGCGCGGCGGCAAGCGCCCGACGACGTTCGCGACCACGCTGGGTTC CGGCCTCGCGCTCGAAACTCTGCAGCGTGTCACTGGCGCCAACACCAAAGCCGGCAAGGCGAAATCCGCGACACCGCTTG CGCCGCTGCCCGGCGAACCCGCGCCCGAGCTCGCCGGCGAATGGTCCATGGTCTCCGCGATCATGAGCGGCAAACCGCTC GAGCCCCAGTACGTCCGCATGGGCAAACGCATCGCTACCGCCAGCGAACTCCAGGTAAAAATCGGACCTCAGGCCGTGTT GAAAGCCGCCTATGCCGTGGAGCGCACCAGCGCTCCCAAGGCCATGAACTATCGCCTCGCCGACGGCCGCGTGCAAGCCG GCATCTGGGAACTCGATGGCAGGCAGCTCAGGACCTGCTTCGCGTCACCTGGCCAGCCGCGCCCCACCGAATTCGCCAGC GCCCGCGGCGATGGCCGCACCTTCACCGTGTGGACGAAGTAA
Upstream 100 bases:
>100_bases GCGATTGGGCCATGGCGAAAGCCTGGCTCTATGGCGAGCTTCAGCCCAAAGCGCCGCGCCCCGCTGCAGTATAATCGCTC AGAGCAAGGAGGGAATCAGG
Downstream 100 bases:
>100_bases TCACCACGCTCCCTGTTTGCCGCCGTACCACCAGATGAGTCCGAGTGTCGCCGTCACCTGGCTCTTCTTCAGAACCCCCA ACGTGCTCGTATAGAAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPDLKALQGTWKIVSLEMDGSAMPSGEASIIVKGSRFTTTAMGGEYSGAIEVDETTSPKSFNLRFDAGPETGNTSYGIYE LSRDSWKICLTLRGGKRPTTFATTLGSGLALETLQRVTGANTKAGKAKSATPLAPLPGEPAPELAGEWSMVSAIMSGKPL EPQYVRMGKRIATASELQVKIGPQAVLKAAYAVERTSAPKAMNYRLADGRVQAGIWELDGRQLRTCFASPGQPRPTEFAS ARGDGRTFTVWTK
Sequences:
>Translated_253_residues MPDLKALQGTWKIVSLEMDGSAMPSGEASIIVKGSRFTTTAMGGEYSGAIEVDETTSPKSFNLRFDAGPETGNTSYGIYE LSRDSWKICLTLRGGKRPTTFATTLGSGLALETLQRVTGANTKAGKAKSATPLAPLPGEPAPELAGEWSMVSAIMSGKPL EPQYVRMGKRIATASELQVKIGPQAVLKAAYAVERTSAPKAMNYRLADGRVQAGIWELDGRQLRTCFASPGQPRPTEFAS ARGDGRTFTVWTK >Mature_252_residues PDLKALQGTWKIVSLEMDGSAMPSGEASIIVKGSRFTTTAMGGEYSGAIEVDETTSPKSFNLRFDAGPETGNTSYGIYEL SRDSWKICLTLRGGKRPTTFATTLGSGLALETLQRVTGANTKAGKAKSATPLAPLPGEPAPELAGEWSMVSAIMSGKPLE PQYVRMGKRIATASELQVKIGPQAVLKAAYAVERTSAPKAMNYRLADGRVQAGIWELDGRQLRTCFASPGQPRPTEFASA RGDGRTFTVWTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27010; Mature: 26879
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLKALQGTWKIVSLEMDGSAMPSGEASIIVKGSRFTTTAMGGEYSGAIEVDETTSPKS CCCCHHCCCCEEEEEEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCEEEECCCCCCCE FNLRFDAGPETGNTSYGIYELSRDSWKICLTLRGGKRPTTFATTLGSGLALETLQRVTGA EEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCEEEHHHCCCHHHHHHHHHHCC NTKAGKAKSATPLAPLPGEPAPELAGEWSMVSAIMSGKPLEPQYVRMGKRIATASELQVK CCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEE IGPQAVLKAAYAVERTSAPKAMNYRLADGRVQAGIWELDGRQLRTCFASPGQPRPTEFAS ECHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCCEEHHHHCCCCCCCCCHHHC ARGDGRTFTVWTK CCCCCCEEEEEEC >Mature Secondary Structure PDLKALQGTWKIVSLEMDGSAMPSGEASIIVKGSRFTTTAMGGEYSGAIEVDETTSPKS CCCHHCCCCEEEEEEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCEEEECCCCCCCE FNLRFDAGPETGNTSYGIYELSRDSWKICLTLRGGKRPTTFATTLGSGLALETLQRVTGA EEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCEEEHHHCCCHHHHHHHHHHCC NTKAGKAKSATPLAPLPGEPAPELAGEWSMVSAIMSGKPLEPQYVRMGKRIATASELQVK CCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEE IGPQAVLKAAYAVERTSAPKAMNYRLADGRVQAGIWELDGRQLRTCFASPGQPRPTEFAS ECHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCCEEHHHHCCCCCCCCCHHHC ARGDGRTFTVWTK CCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA