| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624162
Identifier: 116624162
GI number: 116624162
Start: 6414320
End: 6415675
Strand: Direct
Name: 116624162
Synonym: Acid_5078
Alternate gene names: NA
Gene position: 6414320-6415675 (Clockwise)
Preceding gene: 116624161
Following gene: 116624169
Centisome position: 64.36
GC content: 59.07
Gene sequence:
>1356_bases GTGGATCGAACTTTCTACCGCCTGCAGGGATCTGTCTTCGTCCTGTTAGCAGCCTTGTGCCCGTCGCTGCGAGCGCAAGA TTCCCCGGAACTGAGTAAGCAGGTCGCGGAACTGCGCGCCATGGTGGATCGACTTCAGGGGCGCGTCTCCGAGTTGGAAG CGCGCCTGGCCGTTACCGGAAAGCCGGCGGCGCCGGCCCCGACGTCTCCACCGGCCCAGGCGCCGGAGCCAACCTCAGTG GCAGGTACCACGATCAATTTCCTGATCGATGGATACTATGGCTACAACTTCAACGCACCCATCGGCCGCGCAAACCGGCT GCGGGCGTATGACGTGAGCAGCAACAGCTTCAGCCTTAACCAGGCCGCGGTGGTTCTGGAGAATGCGCCGGATCCGCAGA GAGGAAAACGCTGGGGAGCCCGGCTGGACCTGCAATGGGGACAAGCCACTCAAACGCTGCAAGGCAACCCGGCGAACGAA TCGCGGCCCGAGATTTATCGAAACATCTTTCAGGCGTACGGCACCTTCATCGTTCCCCTTGGCAAAGGACTCAAAGTGGA TTTCGGCAAGTGGGCGAGCTCTTTGGGAATCGAAGGTAACTACACGCAGGATCAGATGAACTACTCCAGGTCCTACTGGT TTAATTTCCTGCCCTTCTATCATATGGGCGTGCGCACGAACTACCAGTTCTCAGACCGCTTCGGAATCAACTATTGGGTC ACTAACGGCGCGCAGCAGACCGAGGCGTTTAAAGGATTCAAAGATCAAATGGGCGGCGTAGTCTTACAGCCGCGCAAGAA TATCAACTGGACCGTGAACTATTACTTTGGCCAGGAGCATCCGGACACACTCTTCTTCTTGAACACGCCGGCGCCGGTAC CGGACCCCCCCACGCAGCAGGGAGTTCCGTTCCTACCAATCGAGGGCGCGCCCACGGGAAGACTTCATATTTTCGACAGT TACCTTACCTGGAATGCGACACCCGCGCTCGCGTTTGCGCTCGAAGGCGATTATGTGGTGCAGCGCCTTTTCAAGAACTC GCCTCCACAGCACGTAGACGGCGGCGCCCTGTACGCGCAGTATGAGTTCACCAAGAAGTTCGCGCTGGCCGGACGGGCGG AGTATTTGTCGGACCGCGGCGCCCTGTTCAGCGGCGTGGAGCAGGCGCTGAAGGAGACGACGCTGACGACGACTTACCGC TTCGCCGACCGTTTCATGGCGCGCGCCGAATGGCGTTACGACTTTTCCAACCAACCCTTCTTCTATACGAGCACGTTGGG GGTTCTGAAGAAGAGCCAGGTGACGGCGACACTCGGACTCATCTGGTGGTACGGCGGCAAACAGGGAGCGTGGTGA
Upstream 100 bases:
>100_bases GAAACGCGTTCGCCGCTCGGGCTGCTTGCGCCGGCCGCGGGCTGAAGGCGCATATAATGAATCGGCGCGGCGAACTCGGT ATCCTTTTGGAGAGGATACC
Downstream 100 bases:
>100_bases TTACTTCGTCCACACGGTGAAGGTGCGGCCATCGCCGCGGGCGCTGGCGAATTCGGTGGGGCGCGGCTGGCCAGGTGACG CGAAGCAGGTCCTGAGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MDRTFYRLQGSVFVLLAALCPSLRAQDSPELSKQVAELRAMVDRLQGRVSELEARLAVTGKPAAPAPTSPPAQAPEPTSV AGTTINFLIDGYYGYNFNAPIGRANRLRAYDVSSNSFSLNQAAVVLENAPDPQRGKRWGARLDLQWGQATQTLQGNPANE SRPEIYRNIFQAYGTFIVPLGKGLKVDFGKWASSLGIEGNYTQDQMNYSRSYWFNFLPFYHMGVRTNYQFSDRFGINYWV TNGAQQTEAFKGFKDQMGGVVLQPRKNINWTVNYYFGQEHPDTLFFLNTPAPVPDPPTQQGVPFLPIEGAPTGRLHIFDS YLTWNATPALAFALEGDYVVQRLFKNSPPQHVDGGALYAQYEFTKKFALAGRAEYLSDRGALFSGVEQALKETTLTTTYR FADRFMARAEWRYDFSNQPFFYTSTLGVLKKSQVTATLGLIWWYGGKQGAW
Sequences:
>Translated_451_residues MDRTFYRLQGSVFVLLAALCPSLRAQDSPELSKQVAELRAMVDRLQGRVSELEARLAVTGKPAAPAPTSPPAQAPEPTSV AGTTINFLIDGYYGYNFNAPIGRANRLRAYDVSSNSFSLNQAAVVLENAPDPQRGKRWGARLDLQWGQATQTLQGNPANE SRPEIYRNIFQAYGTFIVPLGKGLKVDFGKWASSLGIEGNYTQDQMNYSRSYWFNFLPFYHMGVRTNYQFSDRFGINYWV TNGAQQTEAFKGFKDQMGGVVLQPRKNINWTVNYYFGQEHPDTLFFLNTPAPVPDPPTQQGVPFLPIEGAPTGRLHIFDS YLTWNATPALAFALEGDYVVQRLFKNSPPQHVDGGALYAQYEFTKKFALAGRAEYLSDRGALFSGVEQALKETTLTTTYR FADRFMARAEWRYDFSNQPFFYTSTLGVLKKSQVTATLGLIWWYGGKQGAW >Mature_451_residues MDRTFYRLQGSVFVLLAALCPSLRAQDSPELSKQVAELRAMVDRLQGRVSELEARLAVTGKPAAPAPTSPPAQAPEPTSV AGTTINFLIDGYYGYNFNAPIGRANRLRAYDVSSNSFSLNQAAVVLENAPDPQRGKRWGARLDLQWGQATQTLQGNPANE SRPEIYRNIFQAYGTFIVPLGKGLKVDFGKWASSLGIEGNYTQDQMNYSRSYWFNFLPFYHMGVRTNYQFSDRFGINYWV TNGAQQTEAFKGFKDQMGGVVLQPRKNINWTVNYYFGQEHPDTLFFLNTPAPVPDPPTQQGVPFLPIEGAPTGRLHIFDS YLTWNATPALAFALEGDYVVQRLFKNSPPQHVDGGALYAQYEFTKKFALAGRAEYLSDRGALFSGVEQALKETTLTTTYR FADRFMARAEWRYDFSNQPFFYTSTLGVLKKSQVTATLGLIWWYGGKQGAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50650; Mature: 50650
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTFYRLQGSVFVLLAALCPSLRAQDSPELSKQVAELRAMVDRLQGRVSELEARLAVTG CCCCEEEECCHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC KPAAPAPTSPPAQAPEPTSVAGTTINFLIDGYYGYNFNAPIGRANRLRAYDVSSNSFSLN CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEECCCCCCCCCCCCCEEEEECCCCCEECC QAAVVLENAPDPQRGKRWGARLDLQWGQATQTLQGNPANESRPEIYRNIFQAYGTFIVPL EEEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEC GKGLKVDFGKWASSLGIEGNYTQDQMNYSRSYWFNFLPFYHMGVRTNYQFSDRFGINYWV CCCCEEEHHHHHHHCCCCCCCCHHHHHHCHHHHHHCCCCEEECEECCCEECCCCCEEEEE TNGAQQTEAFKGFKDQMGGVVLQPRKNINWTVNYYFGQEHPDTLFFLNTPAPVPDPPTQQ ECCCHHHHHHHCHHHHHCCEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCC GVPFLPIEGAPTGRLHIFDSYLTWNATPALAFALEGDYVVQRLFKNSPPQHVDGGALYAQ CCCEEEECCCCCCEEEEEEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCCCCEEEEE YEFTKKFALAGRAEYLSDRGALFSGVEQALKETTLTTTYRFADRFMARAEWRYDFSNQPF EHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCE FYTSTLGVLKKSQVTATLGLIWWYGGKQGAW EEEHHHHHHHHHHHEEEEEEEEEECCCCCCC >Mature Secondary Structure MDRTFYRLQGSVFVLLAALCPSLRAQDSPELSKQVAELRAMVDRLQGRVSELEARLAVTG CCCCEEEECCHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC KPAAPAPTSPPAQAPEPTSVAGTTINFLIDGYYGYNFNAPIGRANRLRAYDVSSNSFSLN CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEECCCCCCCCCCCCCEEEEECCCCCEECC QAAVVLENAPDPQRGKRWGARLDLQWGQATQTLQGNPANESRPEIYRNIFQAYGTFIVPL EEEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEC GKGLKVDFGKWASSLGIEGNYTQDQMNYSRSYWFNFLPFYHMGVRTNYQFSDRFGINYWV CCCCEEEHHHHHHHCCCCCCCCHHHHHHCHHHHHHCCCCEEECEECCCEECCCCCEEEEE TNGAQQTEAFKGFKDQMGGVVLQPRKNINWTVNYYFGQEHPDTLFFLNTPAPVPDPPTQQ ECCCHHHHHHHCHHHHHCCEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCC GVPFLPIEGAPTGRLHIFDSYLTWNATPALAFALEGDYVVQRLFKNSPPQHVDGGALYAQ CCCEEEECCCCCCEEEEEEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCCCCEEEEE YEFTKKFALAGRAEYLSDRGALFSGVEQALKETTLTTTYRFADRFMARAEWRYDFSNQPF EHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCE FYTSTLGVLKKSQVTATLGLIWWYGGKQGAW EEEHHHHHHHHHHHEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA