| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624123
Identifier: 116624123
GI number: 116624123
Start: 6361407
End: 6363569
Strand: Reverse
Name: 116624123
Synonym: Acid_5039
Alternate gene names: NA
Gene position: 6363569-6361407 (Counterclockwise)
Preceding gene: 116624124
Following gene: 116624122
Centisome position: 63.86
GC content: 62.0
Gene sequence:
>2163_bases ATGCTGGCGGCGGTGTCGGCTTTTGGCGCGACCGTGCAGGGGCCGCCCAAGGCGATCAGTTTCCGGCTGGATGTGATGCC GGTGTTTTTTCGCGCGGGGTGCAATTCAGGCGGGTGCCATGGCGCGGCGGTGGGGAAGGACGGGTTTCACCTCTCGCTGT TCGGGTACGATCCGGCGGGCGATTATTACCGGTTGACGCAGCAGATTGTGGCGCGCCGCGTGGACGTGGCTGCGCCGGCC CAGAGTTTGCTGCTGATGAAGGCGACGGGCATGGTGCCGCATTCGGGCGGGCGAAGATTCAAGCCGGACAGCGAATATTA CACAACATTGTTGAAGTGGATCGAAGCCGGCGCGCTCGACGATGCGGCGAGCGTGCCGACGGTCACCGGGATTTCGCTGT CGCCCGACAACGTGGTGTTCGCGGGCAAGGACAGGAAGCGCGCGTTGCAGGTGATCGCGAAGTATTCCGACGGGACCACG CGGGTGGTGAACAATCTCGCGTTGTACCTGACCAACAACAAGAACACGGCGGACATCAACGACGCGGGCGTGGTGACGGG CGATAAACGTGGTGACACGTTCGTGTTCGCGCGCTTTGCGAAGTACACGGAAGGCGCGGAAGTGATCGTGCTGCCGGATG GCAAGTTCAAATGGCCGAAGCTGACGGCGAACAACTACATCGACGAACTGGTGTATGCGAAGCTGCAAAAGCTGCGCGTG CTGCCGAGCGCGGTATGCACGGACGAGCAGTTCCTGAGACGCGCCTATCTGGACGTAATCGGGCTGCCGCCGACGGCGGA GGAATATCGCGCATTCCTGGCGGACCGGGCGGCGGACAAGCGGGCGAACCTGATCGATTCGCTGCTGGCGCGCGATGAGT ATGCCGATCTGTGGGCCACGAAATGGGCCGACTGGCTGAAGGTGCGGTCGGACAACAATAGCGCCTTCGGCACGGACCGG AAGGCGGCGTTCGCCTATTATGAGTGGATCCGCGAGCAGATGAAGAGGAACGCTCCGCTGGATGAATTCGTGAAGGCACA GGTGGCGGGTGCGGGCAGCAATCTGCATAATCCACCTGTGAACCTGTACACAATGCTGCCGCAGGGGCAGTTGGATGCGA AGGGCGTGGCGCAGGACGTGGCGCAGGTGTTCACCGGGATGCGGGTGCAGTGCGCGCAGTGTCACAATCATCCGTTCGAC CGCTGGACGCAGGAGGACTATTACGGTTTCGTCAGCTTCTTCACGGGCGTGAAGCGCAAAGTGGCGAGCGAGGCGCGCGA GTTCTATATTTACGACGATGTGAGCGCGCCGCCGGCGAAGCATTTGCTGGACGGGCATCCGGTGCCGGCGCGATTCCTGG GCGGCGACGCTCCGGACGTGAAGGGCAAGGATCCGCGGGTGGCCCTGGCGGAGTGGCTGACCGCGAAGGACAACGCGATC TTCCGGCAGAACATGGCGAACCGCCTATGGGCGCAGTTCTTCGGGCGGGGAATCGTGGACCCGGTCGATGATGTGCGGAT CAGCAATCCGCCGAGCAATCGTGAGTTGCTGGAGGAACTGGGCAAGCGACTGGCGGGTTACAACTTCGACGCCAGGAAAT TAATTCGCGACATCTGTCTTTCGAAGACGTATCAACTGGCGGCGACGCCGAACGAGACGAATCGGGATGACGATTCGCAG TTTTCGCACCAGCGATTGCGCCGGTTGCGGGCGGACGTGATTCTGGATGCGCTGGCGCAGGTGACCGAGACGCCCTCGAC GTTCAACGAGATGCCGCGCGGTGTGCGCGCGATGCAGTTGTACGAAGGCGGGAGCCGGGGGAATTATTTTCTGAAGACCT TCGGGTCGGCGGCGCGCGATTCGGTGAATGCGTCTGAGACGCGGCTGGAGCCCACGCTGGCGCAGGCGCTCCATATGGTG AACGGGGACACGATCGAGGGAAAGCTGGCGCAGAGCAAATTGATTCCGCGGATGCTGGCGGCGGGGAAGAAGCCGGGCGA GATCGTGGACGAGCTGTTTATCCGCGCATTGAGCCGGAGGCCATCGGAGAACGAGATGAAGAAAATGATGGCGATTGTGT CGGCGTCGCCTGGGGATAAGAGTGCCTACGACGACGTGGTTTGGGCGCTGGTGAACTCCACGGAATTCGAATTCAATCAT TGA
Upstream 100 bases:
>100_bases AAGTGGCGTTCACGGACGTGGGACAGACGGTGCACTCGACGACGGGTAGCGGCATTTTGCGAGTGGACATGGCGAGGTCC TGGATATGAGGGCGGCGCTC
Downstream 100 bases:
>100_bases TTATGGCCAATCGCGGCGTCCTACTGGTTTTGTGCCTGAGCGCGCTGGGAACAGCGCAGGCGGCGGGGCATCCGAATTAC GAGGATGATGTGAAGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 720; Mature: 720
Protein sequence:
>720_residues MLAAVSAFGATVQGPPKAISFRLDVMPVFFRAGCNSGGCHGAAVGKDGFHLSLFGYDPAGDYYRLTQQIVARRVDVAAPA QSLLLMKATGMVPHSGGRRFKPDSEYYTTLLKWIEAGALDDAASVPTVTGISLSPDNVVFAGKDRKRALQVIAKYSDGTT RVVNNLALYLTNNKNTADINDAGVVTGDKRGDTFVFARFAKYTEGAEVIVLPDGKFKWPKLTANNYIDELVYAKLQKLRV LPSAVCTDEQFLRRAYLDVIGLPPTAEEYRAFLADRAADKRANLIDSLLARDEYADLWATKWADWLKVRSDNNSAFGTDR KAAFAYYEWIREQMKRNAPLDEFVKAQVAGAGSNLHNPPVNLYTMLPQGQLDAKGVAQDVAQVFTGMRVQCAQCHNHPFD RWTQEDYYGFVSFFTGVKRKVASEAREFYIYDDVSAPPAKHLLDGHPVPARFLGGDAPDVKGKDPRVALAEWLTAKDNAI FRQNMANRLWAQFFGRGIVDPVDDVRISNPPSNRELLEELGKRLAGYNFDARKLIRDICLSKTYQLAATPNETNRDDDSQ FSHQRLRRLRADVILDALAQVTETPSTFNEMPRGVRAMQLYEGGSRGNYFLKTFGSAARDSVNASETRLEPTLAQALHMV NGDTIEGKLAQSKLIPRMLAAGKKPGEIVDELFIRALSRRPSENEMKKMMAIVSASPGDKSAYDDVVWALVNSTEFEFNH
Sequences:
>Translated_720_residues MLAAVSAFGATVQGPPKAISFRLDVMPVFFRAGCNSGGCHGAAVGKDGFHLSLFGYDPAGDYYRLTQQIVARRVDVAAPA QSLLLMKATGMVPHSGGRRFKPDSEYYTTLLKWIEAGALDDAASVPTVTGISLSPDNVVFAGKDRKRALQVIAKYSDGTT RVVNNLALYLTNNKNTADINDAGVVTGDKRGDTFVFARFAKYTEGAEVIVLPDGKFKWPKLTANNYIDELVYAKLQKLRV LPSAVCTDEQFLRRAYLDVIGLPPTAEEYRAFLADRAADKRANLIDSLLARDEYADLWATKWADWLKVRSDNNSAFGTDR KAAFAYYEWIREQMKRNAPLDEFVKAQVAGAGSNLHNPPVNLYTMLPQGQLDAKGVAQDVAQVFTGMRVQCAQCHNHPFD RWTQEDYYGFVSFFTGVKRKVASEAREFYIYDDVSAPPAKHLLDGHPVPARFLGGDAPDVKGKDPRVALAEWLTAKDNAI FRQNMANRLWAQFFGRGIVDPVDDVRISNPPSNRELLEELGKRLAGYNFDARKLIRDICLSKTYQLAATPNETNRDDDSQ FSHQRLRRLRADVILDALAQVTETPSTFNEMPRGVRAMQLYEGGSRGNYFLKTFGSAARDSVNASETRLEPTLAQALHMV NGDTIEGKLAQSKLIPRMLAAGKKPGEIVDELFIRALSRRPSENEMKKMMAIVSASPGDKSAYDDVVWALVNSTEFEFNH >Mature_720_residues MLAAVSAFGATVQGPPKAISFRLDVMPVFFRAGCNSGGCHGAAVGKDGFHLSLFGYDPAGDYYRLTQQIVARRVDVAAPA QSLLLMKATGMVPHSGGRRFKPDSEYYTTLLKWIEAGALDDAASVPTVTGISLSPDNVVFAGKDRKRALQVIAKYSDGTT RVVNNLALYLTNNKNTADINDAGVVTGDKRGDTFVFARFAKYTEGAEVIVLPDGKFKWPKLTANNYIDELVYAKLQKLRV LPSAVCTDEQFLRRAYLDVIGLPPTAEEYRAFLADRAADKRANLIDSLLARDEYADLWATKWADWLKVRSDNNSAFGTDR KAAFAYYEWIREQMKRNAPLDEFVKAQVAGAGSNLHNPPVNLYTMLPQGQLDAKGVAQDVAQVFTGMRVQCAQCHNHPFD RWTQEDYYGFVSFFTGVKRKVASEAREFYIYDDVSAPPAKHLLDGHPVPARFLGGDAPDVKGKDPRVALAEWLTAKDNAI FRQNMANRLWAQFFGRGIVDPVDDVRISNPPSNRELLEELGKRLAGYNFDARKLIRDICLSKTYQLAATPNETNRDDDSQ FSHQRLRRLRADVILDALAQVTETPSTFNEMPRGVRAMQLYEGGSRGNYFLKTFGSAARDSVNASETRLEPTLAQALHMV NGDTIEGKLAQSKLIPRMLAAGKKPGEIVDELFIRALSRRPSENEMKKMMAIVSASPGDKSAYDDVVWALVNSTEFEFNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79906; Mature: 79906
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAAVSAFGATVQGPPKAISFRLDVMPVFFRAGCNSGGCHGAAVGKDGFHLSLFGYDPAG CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEECCCCC DYYRLTQQIVARRVDVAAPAQSLLLMKATGMVPHSGGRRFKPDSEYYTTLLKWIEAGALD HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC DAASVPTVTGISLSPDNVVFAGKDRKRALQVIAKYSDGTTRVVNNLALYLTNNKNTADIN CCCCCCCEECEEECCCCEEEECCCHHHHHHHHHHCCCCHHHHHCCEEEEEECCCCCCCCC DAGVVTGDKRGDTFVFARFAKYTEGAEVIVLPDGKFKWPKLTANNYIDELVYAKLQKLRV CCCEEECCCCCCEEEEHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH LPSAVCTDEQFLRRAYLDVIGLPPTAEEYRAFLADRAADKRANLIDSLLARDEYADLWAT HHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KWADWLKVRSDNNSAFGTDRKAAFAYYEWIREQMKRNAPLDEFVKAQVAGAGSNLHNPPV HHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC NLYTMLPQGQLDAKGVAQDVAQVFTGMRVQCAQCHNHPFDRWTQEDYYGFVSFFTGVKRK EEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH VASEAREFYIYDDVSAPPAKHLLDGHPVPARFLGGDAPDVKGKDPRVALAEWLTAKDNAI HHHHHHEEEEEECCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHH FRQNMANRLWAQFFGRGIVDPVDDVRISNPPSNRELLEELGKRLAGYNFDARKLIRDICL HHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH SKTYQLAATPNETNRDDDSQFSHQRLRRLRADVILDALAQVTETPSTFNEMPRGVRAMQL CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEHHH YEGGSRGNYFLKTFGSAARDSVNASETRLEPTLAQALHMVNGDTIEGKLAQSKLIPRMLA HCCCCCCCHHHHHHCHHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AGKKPGEIVDELFIRALSRRPSENEMKKMMAIVSASPGDKSAYDDVVWALVNSTEFEFNH CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLAAVSAFGATVQGPPKAISFRLDVMPVFFRAGCNSGGCHGAAVGKDGFHLSLFGYDPAG CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEECCCCC DYYRLTQQIVARRVDVAAPAQSLLLMKATGMVPHSGGRRFKPDSEYYTTLLKWIEAGALD HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC DAASVPTVTGISLSPDNVVFAGKDRKRALQVIAKYSDGTTRVVNNLALYLTNNKNTADIN CCCCCCCEECEEECCCCEEEECCCHHHHHHHHHHCCCCHHHHHCCEEEEEECCCCCCCCC DAGVVTGDKRGDTFVFARFAKYTEGAEVIVLPDGKFKWPKLTANNYIDELVYAKLQKLRV CCCEEECCCCCCEEEEHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH LPSAVCTDEQFLRRAYLDVIGLPPTAEEYRAFLADRAADKRANLIDSLLARDEYADLWAT HHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KWADWLKVRSDNNSAFGTDRKAAFAYYEWIREQMKRNAPLDEFVKAQVAGAGSNLHNPPV HHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC NLYTMLPQGQLDAKGVAQDVAQVFTGMRVQCAQCHNHPFDRWTQEDYYGFVSFFTGVKRK EEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH VASEAREFYIYDDVSAPPAKHLLDGHPVPARFLGGDAPDVKGKDPRVALAEWLTAKDNAI HHHHHHEEEEEECCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHH FRQNMANRLWAQFFGRGIVDPVDDVRISNPPSNRELLEELGKRLAGYNFDARKLIRDICL HHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH SKTYQLAATPNETNRDDDSQFSHQRLRRLRADVILDALAQVTETPSTFNEMPRGVRAMQL CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEHHH YEGGSRGNYFLKTFGSAARDSVNASETRLEPTLAQALHMVNGDTIEGKLAQSKLIPRMLA HCCCCCCCHHHHHHCHHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AGKKPGEIVDELFIRALSRRPSENEMKKMMAIVSASPGDKSAYDDVVWALVNSTEFEFNH CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA