| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624119
Identifier: 116624119
GI number: 116624119
Start: 6356202
End: 6356993
Strand: Direct
Name: 116624119
Synonym: Acid_5035
Alternate gene names: NA
Gene position: 6356202-6356993 (Clockwise)
Preceding gene: 116624118
Following gene: 116624121
Centisome position: 63.78
GC content: 64.77
Gene sequence:
>792_bases GTGGAGCATAACGGCGGCAACCGCGTCTTCTCCTGCGATTTCCTCCGCTACGTGGATGCCGGCCTCACCATCATTCTCTT CTCCAACACCAGCGACATGCCCGCGCCCGATTACAGCCACCCCCTGGCGCGCGTCGCCCTCGGCCTGGATTACGCGCTGC CGCCAAAAACCATCTTCTCCGCCCGCCTCGCGGCCTATGCCGGTACCTATGCACTGCCTTCCGGCACCATCATCACGGTC ACGCCGGCGAATGCGGGCATCGCACTTGCCACCACCGATCAGGAAGCCTGGGGACTGCTTCAATCCTCCGGCCGCGGCCC CGCCGGCGATCTGGTGAAGAAGCTAAACGAACGCACCGCCGCCGTGCTCGAGGCCGGCGCCAAAGGCGACTTCGCCCCGC TGAAAGCAGCCTTCGGCAGTAATGCCCCCGCCGGCTTCGAACAACGGCAGGCACAAATGTGGAAGCGCCAGCAAGATGAA AACGGCAAGCTCCAGTCCGTCCGCGCTCTCGGCACTTCGCCCGACGGGCCCGGCCTCGCCACCACCGCCGAGCTCACCTT CGAGCACGGGAAGATGTACATCCAATATATGTGGAGCCCCGAAGGCGAGCTCGCGGGCATGCTGATCTCAGACCAGCTTT CGCCCAATCGCTACTCCCCCGAGTCCGGGTCGGACTTCGTCTCCTTCACCCTGCCCGGCCCACGGGTGAAGCGGGTGAAG TTCACACTGGATGCGTCTGGCGCGCCTAAGGAGTTACTGCTCGGCCCTGTGTCGGCGCGCAAAGTCCAGTAG
Upstream 100 bases:
>100_bases AGAACCAAGTTCGAAACCGGCTACGTGAACGAAGGCCCGATGAAGCCAATCCAAGTACGCGTACGGCTGGTCCATCGTGC AGGGCCCCTCCGGCAAACTC
Downstream 100 bases:
>100_bases AACGGGAGATCGCGAAGTTGCACTGCGCACGGTCGCTCCTATGTGTTCGCCGGCACCGCACCTAATACCACCCAGCCGTC CGCCCCGATGAACGATGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MEHNGGNRVFSCDFLRYVDAGLTIILFSNTSDMPAPDYSHPLARVALGLDYALPPKTIFSARLAAYAGTYALPSGTIITV TPANAGIALATTDQEAWGLLQSSGRGPAGDLVKKLNERTAAVLEAGAKGDFAPLKAAFGSNAPAGFEQRQAQMWKRQQDE NGKLQSVRALGTSPDGPGLATTAELTFEHGKMYIQYMWSPEGELAGMLISDQLSPNRYSPESGSDFVSFTLPGPRVKRVK FTLDASGAPKELLLGPVSARKVQ
Sequences:
>Translated_263_residues MEHNGGNRVFSCDFLRYVDAGLTIILFSNTSDMPAPDYSHPLARVALGLDYALPPKTIFSARLAAYAGTYALPSGTIITV TPANAGIALATTDQEAWGLLQSSGRGPAGDLVKKLNERTAAVLEAGAKGDFAPLKAAFGSNAPAGFEQRQAQMWKRQQDE NGKLQSVRALGTSPDGPGLATTAELTFEHGKMYIQYMWSPEGELAGMLISDQLSPNRYSPESGSDFVSFTLPGPRVKRVK FTLDASGAPKELLLGPVSARKVQ >Mature_263_residues MEHNGGNRVFSCDFLRYVDAGLTIILFSNTSDMPAPDYSHPLARVALGLDYALPPKTIFSARLAAYAGTYALPSGTIITV TPANAGIALATTDQEAWGLLQSSGRGPAGDLVKKLNERTAAVLEAGAKGDFAPLKAAFGSNAPAGFEQRQAQMWKRQQDE NGKLQSVRALGTSPDGPGLATTAELTFEHGKMYIQYMWSPEGELAGMLISDQLSPNRYSPESGSDFVSFTLPGPRVKRVK FTLDASGAPKELLLGPVSARKVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28036; Mature: 28036
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHNGGNRVFSCDFLRYVDAGLTIILFSNTSDMPAPDYSHPLARVALGLDYALPPKTIFS CCCCCCCEEEEEHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHH ARLAAYAGTYALPSGTIITVTPANAGIALATTDQEAWGLLQSSGRGPAGDLVKKLNERTA HHHHHHHCCEECCCCCEEEEECCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHH AVLEAGAKGDFAPLKAAFGSNAPAGFEQRQAQMWKRQQDENGKLQSVRALGTSPDGPGLA HHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCE TTAELTFEHGKMYIQYMWSPEGELAGMLISDQLSPNRYSPESGSDFVSFTLPGPRVKRVK EEEEEEEECCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEE FTLDASGAPKELLLGPVSARKVQ EEEECCCCCHHHEECCCCCCCCC >Mature Secondary Structure MEHNGGNRVFSCDFLRYVDAGLTIILFSNTSDMPAPDYSHPLARVALGLDYALPPKTIFS CCCCCCCEEEEEHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHH ARLAAYAGTYALPSGTIITVTPANAGIALATTDQEAWGLLQSSGRGPAGDLVKKLNERTA HHHHHHHCCEECCCCCEEEEECCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHH AVLEAGAKGDFAPLKAAFGSNAPAGFEQRQAQMWKRQQDENGKLQSVRALGTSPDGPGLA HHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCE TTAELTFEHGKMYIQYMWSPEGELAGMLISDQLSPNRYSPESGSDFVSFTLPGPRVKRVK EEEEEEEECCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEE FTLDASGAPKELLLGPVSARKVQ EEEECCCCCHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA