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The map label for this gene is pbpX [H]

Identifier: 116624118

GI number: 116624118

Start: 6355310

End: 6356212

Strand: Direct

Name: pbpX [H]

Synonym: Acid_5034

Alternate gene names: 116624118

Gene position: 6355310-6356212 (Clockwise)

Preceding gene: 116624117

Following gene: 116624119

Centisome position: 63.77

GC content: 62.46

Gene sequence:

>903_bases
ATGCGCTTTCTTGCATTCCCGCTGCTCGCTGTCGCCGCCTTCGGCCAGGACTCCAAGCTCGACGATTACGTCACACGCCT
CGCGGGCTTCGGCTTCTCCGGCGTGGCCCTCGTAGCCAAGGGCGACAAGATCCTGCACGAAAAGGGGTACGGGCTCGCCG
ACCGCAAGAGCGGCACGCCCATGACTCCCGACACCATCATCTCCATCGGCTCCATCACCAAACAGTTCACCGCCGCCGCC
ATCCTCAAGCTGGAAATGCAGGGCAAGCTGAAGACCACCGACCCCGTCGTCAATTTCTTCCCCAACGCGCCCGTCGACAA
GAAGGCGATCACGCTCCACCAGCTCCTCACCCACACCGCCGGACTGCGCTCCGACTACGCGGCCACCGACTACCAACCCT
ACGCCCGCGACGCGTACATGCAGCGTATTTTCGACGCCCCCCTGCTGTCACCGCCCGGCGAACATTTCCGCTACGCCAAC
GCCGGCTACAGCATGCTCGCCGCCATCGTGGAGATCGCCAGTGGCCAGCCCTACGAACGCTACCTCCACACCAACCTGTT
CGAGCCCTCCGGCATGACCATGACCGGCTACAAGCTTCCTAAATTCCCCGAGGCCAAAATCCCGCGCGGCTACCTCGGCG
AAAACGATTGGGGTACTATCTTCGAACGTTCCTGGGCTCCCGACGGCCCCTGGTGGGAATTGCGCGGCAACGGCGGCATC
CACTCCACCGCGATGGATATGTACCGATGGCACCAGGCGCTGGAATCCGGCAAGATTCTCTCGAAAGAGGCCAGAACCAA
GTTCGAAACCGGCTACGTGAACGAAGGCCCGATGAAGCCAATCCAAGTACGCGTACGGCTGGTCCATCGTGCAGGGCCCC
TCCGGCAAACTCGTGGAGCATAA

Upstream 100 bases:

>100_bases
AAGGTTCCCCAGGTACCGGCGCCACCCTCATCTTCACCCTGCCCACGCTGGCGTAGTGTCTCTTAACATCTCCTTAACAC
CTCCCTGCTACCGTCCTCAC

Downstream 100 bases:

>100_bases
CGGCGGCAACCGCGTCTTCTCCTGCGATTTCCTCCGCTACGTGGATGCCGGCCTCACCATCATTCTCTTCTCCAACACCA
GCGACATGCCCGCGCCCGAT

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRFLAFPLLAVAAFGQDSKLDDYVTRLAGFGFSGVALVAKGDKILHEKGYGLADRKSGTPMTPDTIISIGSITKQFTAAA
ILKLEMQGKLKTTDPVVNFFPNAPVDKKAITLHQLLTHTAGLRSDYAATDYQPYARDAYMQRIFDAPLLSPPGEHFRYAN
AGYSMLAAIVEIASGQPYERYLHTNLFEPSGMTMTGYKLPKFPEAKIPRGYLGENDWGTIFERSWAPDGPWWELRGNGGI
HSTAMDMYRWHQALESGKILSKEARTKFETGYVNEGPMKPIQVRVRLVHRAGPLRQTRGA

Sequences:

>Translated_300_residues
MRFLAFPLLAVAAFGQDSKLDDYVTRLAGFGFSGVALVAKGDKILHEKGYGLADRKSGTPMTPDTIISIGSITKQFTAAA
ILKLEMQGKLKTTDPVVNFFPNAPVDKKAITLHQLLTHTAGLRSDYAATDYQPYARDAYMQRIFDAPLLSPPGEHFRYAN
AGYSMLAAIVEIASGQPYERYLHTNLFEPSGMTMTGYKLPKFPEAKIPRGYLGENDWGTIFERSWAPDGPWWELRGNGGI
HSTAMDMYRWHQALESGKILSKEARTKFETGYVNEGPMKPIQVRVRLVHRAGPLRQTRGA
>Mature_300_residues
MRFLAFPLLAVAAFGQDSKLDDYVTRLAGFGFSGVALVAKGDKILHEKGYGLADRKSGTPMTPDTIISIGSITKQFTAAA
ILKLEMQGKLKTTDPVVNFFPNAPVDKKAITLHQLLTHTAGLRSDYAATDYQPYARDAYMQRIFDAPLLSPPGEHFRYAN
AGYSMLAAIVEIASGQPYERYLHTNLFEPSGMTMTGYKLPKFPEAKIPRGYLGENDWGTIFERSWAPDGPWWELRGNGGI
HSTAMDMYRWHQALESGKILSKEARTKFETGYVNEGPMKPIQVRVRLVHRAGPLRQTRGA

Specific function: Binds Penicillin And Contributes To The Normal Morphology Of Escherichia Coli. [C]

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential). Note=Localizes to the division septum during vegetative growth, and accumulates at the prespore during sporulation [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-lactamase family [H]

Homologues:

Organism=Escherichia coli, GI1786574, Length=247, Percent_Identity=29.5546558704453, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87082101, Length=203, Percent_Identity=27.0935960591133, Blast_Score=72, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17550934, Length=190, Percent_Identity=29.4736842105263, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115533026, Length=280, Percent_Identity=26.4285714285714, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 33363; Mature: 33363

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLAFPLLAVAAFGQDSKLDDYVTRLAGFGFSGVALVAKGDKILHEKGYGLADRKSGTP
CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCC
MTPDTIISIGSITKQFTAAAILKLEMQGKLKTTDPVVNFFPNAPVDKKAITLHQLLTHTA
CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHH
GLRSDYAATDYQPYARDAYMQRIFDAPLLSPPGEHFRYANAGYSMLAAIVEIASGQPYER
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCEECCCHHHHHHHHHHHHCCCCHHH
YLHTNLFEPSGMTMTGYKLPKFPEAKIPRGYLGENDWGTIFERSWAPDGPWWELRGNGGI
HHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCC
HSTAMDMYRWHQALESGKILSKEARTKFETGYVNEGPMKPIQVRVRLVHRAGPLRQTRGA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MRFLAFPLLAVAAFGQDSKLDDYVTRLAGFGFSGVALVAKGDKILHEKGYGLADRKSGTP
CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCC
MTPDTIISIGSITKQFTAAAILKLEMQGKLKTTDPVVNFFPNAPVDKKAITLHQLLTHTA
CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHH
GLRSDYAATDYQPYARDAYMQRIFDAPLLSPPGEHFRYANAGYSMLAAIVEIASGQPYER
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCEECCCHHHHHHHHHHHHCCCCHHH
YLHTNLFEPSGMTMTGYKLPKFPEAKIPRGYLGENDWGTIFERSWAPDGPWWELRGNGGI
HHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCC
HSTAMDMYRWHQALESGKILSKEARTKFETGYVNEGPMKPIQVRVRLVHRAGPLRQTRGA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]