| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is oar [H]
Identifier: 116624053
GI number: 116624053
Start: 6270842
End: 6273613
Strand: Direct
Name: oar [H]
Synonym: Acid_4967
Alternate gene names: 116624053
Gene position: 6270842-6273613 (Clockwise)
Preceding gene: 116624052
Following gene: 116624056
Centisome position: 62.92
GC content: 63.35
Gene sequence:
>2772_bases TTGAATTTTCGAATCCTTATGACGCTGGTGGCGATTTCCGCCGCGGCGCAGGAGTCAATTCAATTCGGCAGCGTCGGCGG GCGTGTGGCGGACGCCAGCGGCGCAGTGATACCGAACGCGAAGGTCACGGCGCGCCGGGTGGACACCAATATCTCGAGCA CGACGCTGACCGATCGCGAGGGCAGATTCGGTTTCTCCGCGCTCAAGGTTGGGCCCTACGAAATCCGGGTGCAGCAGGCG GGCTTCGCTACTGCTGCGCTGACGGTTAAGCTCGGCGTCGGATCCGCATATGAACTCCCGGTGGTGCTGACGGTGGCCGC GGCGCAGACCGATGTGATGGTCACGGGCGAAGGCGACCTGCTGGAGGCGGCGCGCACACAGGTTGCCGGGACCGTATCGC AGAGCGAAGTCCGAGGGTTGCCGCTCAATGGGCGGAGCTTTATGGATCTGGCGCTGCTGGTGCCGGGCGTGGCGCCGACG AACACGGGCAGCAACCAGTTGTTCGCCGAAACCTCGGCGGTTCCGGGACAGGGAATCTCGGTGGGCAGCCAGCGCAATGT CTCGAACAACTTCATGGTGGACGGTCTTTCGGCTAACGACGATGCCGCGGGCCTAAGCGGCGCGTTCTTTGGGCTTGACG TAGTGCAGGAATTCCAGGTGGTGACGTCCGGCGGCCAGGCCGAGTTGGGGCGCGCCCTGGGCGGCTACATCAGCATGGTG ACGAAGAGCGGCACCAATCAGGTCCATGGCGATCTTTATGGCTACGGGCGCAATCAGCGGCTGTTTGCCGCCAACCCGCT ATCGAACACGCGGCTGCCGCTTTCGCAGGCGCAGTACGGCGCCGGGCTGGGCGGTCCGGTGGTTCGCGACCGCACCTTCT ATTTCGTAAATTTCGAGGAACGCGCGCTCAACCAGAGCGGCCTGATCACGATTTCGGCGGCCAATGCCGCGGCGATTAAC GAACGGCTGGCCGCCACCGGCTACGCGGGAGCGCGCATCGCCACCGGGCTCTTCCCCAACCCGGTGCATAACTCGAACTT CCTCGGCAAGGTGGATCACCAGTTCAGCGTGGAGGATCAATTCAGCGTTCGCTACAGCGTCTACGATGCGCACAGCAGCA ATTCGCGCGGGGCCGGCGGATTGAATGCCGCGAGTGCGTCCGCGAGCTTGGATAATACCGACCAAACGATCGCGATCAGC AATGTTGCCACGTTATCGGCCGGCACCGTGAACGAGACCCGCGGACAATTCACACGCGGCAGCCTGGCGGCGCCTCCGGC CGACCCGACGGGTCCGGCCGTGACCATCCAGGGCGTGGCGACGTTCGGCACACTTTCCAGTTCTCCGACCGCGCGTTTCA ACAATCTTTACGAAGTCGCCGACAATCTGACGCACCGCTCGGGGGCGCACTCGTTGCGCGCCGGCGTGGACTTTCTGTAC AACGATCTCACCATCGCGTTCCCGCGGGCGGCGCGCGGCGCATACACGTTCAGCTCGCTGGCGAATTTTCTCGCAGGCAC GTACAACAATGCCGGCTTCACGCAGACTTTCGGTAATACATCGGTGGCGCAGACCAACCCGAACGCCGGATTTTATGCGC AGGACGAGTCGAAGGTCAGTTCGCGGCTGACGTTGAACCTCGGTGCCCGATACGATTTGCAATATCTCAAGAGCATCGCC ACCGATACCAACAACATCGCGCCGCGAGCGGGATTCGCGTGGTCGCCGTTCAAGGCGCGACGCACCGTGATCCGGGGAAG CTTCGGACTTTTTTACGACCGCGTGCCGCTGCGCGCGCTCGCGAATGCACTGCTCTCGAGCAACAACACCACGCAGATCA CCAGCGCCACGCAGATCAACGTCAGCCTGTCGCCGGGGCAAGCGGGAGCGCCAGTGTTCCCCGCGATCCTGCCCGGCACG GCGCTGCCCCCGGGAGTGCTGGCGGGCTTTACGACTATGGACCCGCGGATGCAAAACGCCTACAGCGAGCAGGGCAGCCT GGAGGTGGAGCAGCAGATCGGCGCGCGCAGTACGCTGAGCGTTGGCTATCAGCACCTGCGCGGGCTGCACCTGATCGCGT CGATTAATCAGAATGCGCCGGCGTGCACGGCCGCGGGGAACAACAACGGCTGCAGGCCCAACGCGTCGTACGGAAACAAC AGCCAGTATCGCGCGGCGGGCGACTCCCGCTACGACGGGTTGCACGTCTCCTTCATGCAGCGGCCGGCCAAGTGGGGCAG TTATCGCGTGTCGTACACATGGTCCAAGTCGCTCGACGACGTGGGCGAGTTTTTCTTCAGCTCGCCGATCGACCTGACGA ACATCTGGCGCGATTACGGAAGGAGCGACGACGATCAACGGCATCGGGTCGTGGTGGACGGCGCGTTGCGGAAGATCGGC GGCTTTGAGTTGAGCGGCATGCTGCAGTACTATTCGGCGCTGCCCCTCAACATCACGTCGGGCGCGACTACCGTGCAGGG TACGGCTGGACGGCCGGTCGTGAATGGCGCTTTCATCGGACGCAATACAGGGACCGGCAATGACTTTTTCAGCGTGAGCG CACGGGCGAGCCGGAGTTTCAAGATTGGCGAAAAGCTCCGGCTGGAAGCACTGGCGGAGTCGTTCAATGCGCTCAATCAT AGGAATAATCTGGCTAAGAACGGCGTCTTCGGGTCGGGGGCGTATCCCGCAAGCCCCGCCTCGACGTTCGGCCAGGTGAC GGCCGTCAACGATCCGCGGTCGATGCAGGTTGCATTGAGGTTGAGGTTCTAG
Upstream 100 bases:
>100_bases TAGATCGCTCCCTTACGTTCGCGGTTCGCGGGATGCGTATATTCGTGAAACGCAACGGTTGAGGGGCGATTCCTTGCTGG CCAAATCGAGGAGATCAGTT
Downstream 100 bases:
>100_bases CGCGGCGGGGCGAGCCGACTGATAGTCGGCTGCACGGCAGGATTGCCTGCCCCACAAAGCGGCAAGCTACAAACTGAGGT CGTGGTTTACACGTACAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 923; Mature: 923
Protein sequence:
>923_residues MNFRILMTLVAISAAAQESIQFGSVGGRVADASGAVIPNAKVTARRVDTNISSTTLTDREGRFGFSALKVGPYEIRVQQA GFATAALTVKLGVGSAYELPVVLTVAAAQTDVMVTGEGDLLEAARTQVAGTVSQSEVRGLPLNGRSFMDLALLVPGVAPT NTGSNQLFAETSAVPGQGISVGSQRNVSNNFMVDGLSANDDAAGLSGAFFGLDVVQEFQVVTSGGQAELGRALGGYISMV TKSGTNQVHGDLYGYGRNQRLFAANPLSNTRLPLSQAQYGAGLGGPVVRDRTFYFVNFEERALNQSGLITISAANAAAIN ERLAATGYAGARIATGLFPNPVHNSNFLGKVDHQFSVEDQFSVRYSVYDAHSSNSRGAGGLNAASASASLDNTDQTIAIS NVATLSAGTVNETRGQFTRGSLAAPPADPTGPAVTIQGVATFGTLSSSPTARFNNLYEVADNLTHRSGAHSLRAGVDFLY NDLTIAFPRAARGAYTFSSLANFLAGTYNNAGFTQTFGNTSVAQTNPNAGFYAQDESKVSSRLTLNLGARYDLQYLKSIA TDTNNIAPRAGFAWSPFKARRTVIRGSFGLFYDRVPLRALANALLSSNNTTQITSATQINVSLSPGQAGAPVFPAILPGT ALPPGVLAGFTTMDPRMQNAYSEQGSLEVEQQIGARSTLSVGYQHLRGLHLIASINQNAPACTAAGNNNGCRPNASYGNN SQYRAAGDSRYDGLHVSFMQRPAKWGSYRVSYTWSKSLDDVGEFFFSSPIDLTNIWRDYGRSDDDQRHRVVVDGALRKIG GFELSGMLQYYSALPLNITSGATTVQGTAGRPVVNGAFIGRNTGTGNDFFSVSARASRSFKIGEKLRLEALAESFNALNH RNNLAKNGVFGSGAYPASPASTFGQVTAVNDPRSMQVALRLRF
Sequences:
>Translated_923_residues MNFRILMTLVAISAAAQESIQFGSVGGRVADASGAVIPNAKVTARRVDTNISSTTLTDREGRFGFSALKVGPYEIRVQQA GFATAALTVKLGVGSAYELPVVLTVAAAQTDVMVTGEGDLLEAARTQVAGTVSQSEVRGLPLNGRSFMDLALLVPGVAPT NTGSNQLFAETSAVPGQGISVGSQRNVSNNFMVDGLSANDDAAGLSGAFFGLDVVQEFQVVTSGGQAELGRALGGYISMV TKSGTNQVHGDLYGYGRNQRLFAANPLSNTRLPLSQAQYGAGLGGPVVRDRTFYFVNFEERALNQSGLITISAANAAAIN ERLAATGYAGARIATGLFPNPVHNSNFLGKVDHQFSVEDQFSVRYSVYDAHSSNSRGAGGLNAASASASLDNTDQTIAIS NVATLSAGTVNETRGQFTRGSLAAPPADPTGPAVTIQGVATFGTLSSSPTARFNNLYEVADNLTHRSGAHSLRAGVDFLY NDLTIAFPRAARGAYTFSSLANFLAGTYNNAGFTQTFGNTSVAQTNPNAGFYAQDESKVSSRLTLNLGARYDLQYLKSIA TDTNNIAPRAGFAWSPFKARRTVIRGSFGLFYDRVPLRALANALLSSNNTTQITSATQINVSLSPGQAGAPVFPAILPGT ALPPGVLAGFTTMDPRMQNAYSEQGSLEVEQQIGARSTLSVGYQHLRGLHLIASINQNAPACTAAGNNNGCRPNASYGNN SQYRAAGDSRYDGLHVSFMQRPAKWGSYRVSYTWSKSLDDVGEFFFSSPIDLTNIWRDYGRSDDDQRHRVVVDGALRKIG GFELSGMLQYYSALPLNITSGATTVQGTAGRPVVNGAFIGRNTGTGNDFFSVSARASRSFKIGEKLRLEALAESFNALNH RNNLAKNGVFGSGAYPASPASTFGQVTAVNDPRSMQVALRLRF >Mature_923_residues MNFRILMTLVAISAAAQESIQFGSVGGRVADASGAVIPNAKVTARRVDTNISSTTLTDREGRFGFSALKVGPYEIRVQQA GFATAALTVKLGVGSAYELPVVLTVAAAQTDVMVTGEGDLLEAARTQVAGTVSQSEVRGLPLNGRSFMDLALLVPGVAPT NTGSNQLFAETSAVPGQGISVGSQRNVSNNFMVDGLSANDDAAGLSGAFFGLDVVQEFQVVTSGGQAELGRALGGYISMV TKSGTNQVHGDLYGYGRNQRLFAANPLSNTRLPLSQAQYGAGLGGPVVRDRTFYFVNFEERALNQSGLITISAANAAAIN ERLAATGYAGARIATGLFPNPVHNSNFLGKVDHQFSVEDQFSVRYSVYDAHSSNSRGAGGLNAASASASLDNTDQTIAIS NVATLSAGTVNETRGQFTRGSLAAPPADPTGPAVTIQGVATFGTLSSSPTARFNNLYEVADNLTHRSGAHSLRAGVDFLY NDLTIAFPRAARGAYTFSSLANFLAGTYNNAGFTQTFGNTSVAQTNPNAGFYAQDESKVSSRLTLNLGARYDLQYLKSIA TDTNNIAPRAGFAWSPFKARRTVIRGSFGLFYDRVPLRALANALLSSNNTTQITSATQINVSLSPGQAGAPVFPAILPGT ALPPGVLAGFTTMDPRMQNAYSEQGSLEVEQQIGARSTLSVGYQHLRGLHLIASINQNAPACTAAGNNNGCRPNASYGNN SQYRAAGDSRYDGLHVSFMQRPAKWGSYRVSYTWSKSLDDVGEFFFSSPIDLTNIWRDYGRSDDDQRHRVVVDGALRKIG GFELSGMLQYYSALPLNITSGATTVQGTAGRPVVNGAFIGRNTGTGNDFFSVSARASRSFKIGEKLRLEALAESFNALNH RNNLAKNGVFGSGAYPASPASTFGQVTAVNDPRSMQVALRLRF
Specific function: Required for cellular adhesion during fruiting body formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013784 - InterPro: IPR014766 - InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 97434; Mature: 97434
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFRILMTLVAISAAAQESIQFGSVGGRVADASGAVIPNAKVTARRVDTNISSTTLTDRE CCEEEEHHHHHHHHHHHHCEEECCCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEECCC GRFGFSALKVGPYEIRVQQAGFATAALTVKLGVGSAYELPVVLTVAAAQTDVMVTGEGDL CCCCCEEEEECCEEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCEEEEEECCCCH LEAARTQVAGTVSQSEVRGLPLNGRSFMDLALLVPGVAPTNTGSNQLFAETSAVPGQGIS HHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCC VGSQRNVSNNFMVDGLSANDDAAGLSGAFFGLDVVQEFQVVTSGGQAELGRALGGYISMV CCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEE TKSGTNQVHGDLYGYGRNQRLFAANPLSNTRLPLSQAQYGAGLGGPVVRDRTFYFVNFEE ECCCCCCCCCCEEECCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCEEECCEEEEEECHH RALNQSGLITISAANAAAINERLAATGYAGARIATGLFPNPVHNSNFLGKVDHQFSVEDQ HHCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC FSVRYSVYDAHSSNSRGAGGLNAASASASLDNTDQTIAISNVATLSAGTVNETRGQFTRG EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEECCCCCCCCCCCCCCC SLAAPPADPTGPAVTIQGVATFGTLSSSPTARFNNLYEVADNLTHRSGAHSLRAGVDFLY CCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH NDLTIAFPRAARGAYTFSSLANFLAGTYNNAGFTQTFGNTSVAQTNPNAGFYAQDESKVS CCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCCEEECCHHHCC SRLTLNLGARYDLQYLKSIATDTNNIAPRAGFAWSPFKARRTVIRGSFGLFYDRVPLRAL EEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCHHHH ANALLSSNNTTQITSATQINVSLSPGQAGAPVFPAILPGTALPPGVLAGFTTMDPRMQNA HHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCHHHHH YSEQGSLEVEQQIGARSTLSVGYQHLRGLHLIASINQNAPACTAAGNNNGCRPNASYGNN HCCCCCEEHHHHCCCCHHHHHHHHHHCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCC SQYRAAGDSRYDGLHVSFMQRPAKWGSYRVSYTWSKSLDDVGEFFFSSPIDLTNIWRDYG CCEEECCCCCCCCEEEHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHC RSDDDQRHRVVVDGALRKIGGFELSGMLQYYSALPLNITSGATTVQGTAGRPVVNGAFIG CCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHCCCEEECCCCCEEECCCCCCEECCEEEE RNTGTGNDFFSVSARASRSFKIGEKLRLEALAESFNALNHRNNLAKNGVFGSGAYPASPA CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC STFGQVTAVNDPRSMQVALRLRF CCCCEEEEECCCCCEEEEEEEEC >Mature Secondary Structure MNFRILMTLVAISAAAQESIQFGSVGGRVADASGAVIPNAKVTARRVDTNISSTTLTDRE CCEEEEHHHHHHHHHHHHCEEECCCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEECCC GRFGFSALKVGPYEIRVQQAGFATAALTVKLGVGSAYELPVVLTVAAAQTDVMVTGEGDL CCCCCEEEEECCEEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCEEEEEECCCCH LEAARTQVAGTVSQSEVRGLPLNGRSFMDLALLVPGVAPTNTGSNQLFAETSAVPGQGIS HHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCC VGSQRNVSNNFMVDGLSANDDAAGLSGAFFGLDVVQEFQVVTSGGQAELGRALGGYISMV CCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEE TKSGTNQVHGDLYGYGRNQRLFAANPLSNTRLPLSQAQYGAGLGGPVVRDRTFYFVNFEE ECCCCCCCCCCEEECCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCEEECCEEEEEECHH RALNQSGLITISAANAAAINERLAATGYAGARIATGLFPNPVHNSNFLGKVDHQFSVEDQ HHCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC FSVRYSVYDAHSSNSRGAGGLNAASASASLDNTDQTIAISNVATLSAGTVNETRGQFTRG EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEECCCCCCCCCCCCCCC SLAAPPADPTGPAVTIQGVATFGTLSSSPTARFNNLYEVADNLTHRSGAHSLRAGVDFLY CCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH NDLTIAFPRAARGAYTFSSLANFLAGTYNNAGFTQTFGNTSVAQTNPNAGFYAQDESKVS CCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCCEEECCHHHCC SRLTLNLGARYDLQYLKSIATDTNNIAPRAGFAWSPFKARRTVIRGSFGLFYDRVPLRAL EEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCHHHH ANALLSSNNTTQITSATQINVSLSPGQAGAPVFPAILPGTALPPGVLAGFTTMDPRMQNA HHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCHHHHH YSEQGSLEVEQQIGARSTLSVGYQHLRGLHLIASINQNAPACTAAGNNNGCRPNASYGNN HCCCCCEEHHHHCCCCHHHHHHHHHHCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCC SQYRAAGDSRYDGLHVSFMQRPAKWGSYRVSYTWSKSLDDVGEFFFSSPIDLTNIWRDYG CCEEECCCCCCCCEEEHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHC RSDDDQRHRVVVDGALRKIGGFELSGMLQYYSALPLNITSGATTVQGTAGRPVVNGAFIG CCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHCCCEEECCCCCEEECCCCCCEECCEEEE RNTGTGNDFFSVSARASRSFKIGEKLRLEALAESFNALNHRNNLAKNGVFGSGAYPASPA CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC STFGQVTAVNDPRSMQVALRLRF CCCCEEEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335633 [H]