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The map label for this gene is paiB [H]

Identifier: 116624039

GI number: 116624039

Start: 6250993

End: 6251718

Strand: Reverse

Name: paiB [H]

Synonym: Acid_4953

Alternate gene names: 116624039

Gene position: 6251718-6250993 (Counterclockwise)

Preceding gene: 116624040

Following gene: 116624038

Centisome position: 62.73

GC content: 58.13

Gene sequence:

>726_bases
ATGAACCGTCGCGATCTTCTCGCCGGACTCGCCTTGGCGAGCGTCGAAGCCAGATCACAAACCCGCACAAAGGAGAATCC
CGCCGAATCGCTTTACATTCCCAAGCCCCAATTGGTGGACGACCGCCGCTTCCTGCATGCATTCATGGACGAATTCTCCT
TCGTCGACCTGGTGACGGTTTCTCCGTCGCTGCGAATCACGCACATTCCGGTTTGGCTGGACCGGTCCGCGGGAGCGTAT
GGCACAATCCACGGGCATATCTCGCGCCAGAATCCGCAGCACGAAGCGTTCGACGGCAGGCAAACCGGAGTCATTGTCTT
CCGTGGGCCGCACGGATATATCTCGCCGACCTGGTACGCAAAGAGCGAAAACGCAGTGCCCACCTGGAACTTTGCCGTAG
TCCATGCGACCGGCAAACTCCGGCCGGTGGAAGGCCGCAAGCAACTCAACGACTTGCTTACTAAGTTGATTGCCAAATTC
GAGAGCTATGAGGGCACCAACTACGATTTCGCCAGGATTGACGAGGGCTACAAGAACGGACTTATGGGCGGAATCATCGG
CTTCGAACTGGAGATCGAGCTGCTCGAGGGCAAGTTCAAACTCGGCCAGGACCGCAGCCAGGCCGACCGGGAGAGCCTGC
TGAAGAAGTTATCGGAGGCCAAGGCGCCGCGTTCCCTCCGCGAATTTACGAGCAACTTTTACGATCGCCAGAAGAGCCTG
GGGTAG

Upstream 100 bases:

>100_bases
CTAACAACTCAAACCTCCCAACGGCCTGCTCCGTGAACGGGCAGGCCGTTTTATGCCTCTATGAGCGACAATAGGTCAAT
CTACCGCACCGGAGGCAGCC

Downstream 100 bases:

>100_bases
AATCGTCTAAACTGCCCATGACCCCTGACAAAATGCGTAGACGATTTCTGGCCTGCTGCTCCGGTATCGGACTGGCCGGC
ACGCTTCTGCCCGGTGTGCT

Product: negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNRRDLLAGLALASVEARSQTRTKENPAESLYIPKPQLVDDRRFLHAFMDEFSFVDLVTVSPSLRITHIPVWLDRSAGAY
GTIHGHISRQNPQHEAFDGRQTGVIVFRGPHGYISPTWYAKSENAVPTWNFAVVHATGKLRPVEGRKQLNDLLTKLIAKF
ESYEGTNYDFARIDEGYKNGLMGGIIGFELEIELLEGKFKLGQDRSQADRESLLKKLSEAKAPRSLREFTSNFYDRQKSL
G

Sequences:

>Translated_241_residues
MNRRDLLAGLALASVEARSQTRTKENPAESLYIPKPQLVDDRRFLHAFMDEFSFVDLVTVSPSLRITHIPVWLDRSAGAY
GTIHGHISRQNPQHEAFDGRQTGVIVFRGPHGYISPTWYAKSENAVPTWNFAVVHATGKLRPVEGRKQLNDLLTKLIAKF
ESYEGTNYDFARIDEGYKNGLMGGIIGFELEIELLEGKFKLGQDRSQADRESLLKKLSEAKAPRSLREFTSNFYDRQKSL
G
>Mature_241_residues
MNRRDLLAGLALASVEARSQTRTKENPAESLYIPKPQLVDDRRFLHAFMDEFSFVDLVTVSPSLRITHIPVWLDRSAGAY
GTIHGHISRQNPQHEAFDGRQTGVIVFRGPHGYISPTWYAKSENAVPTWNFAVVHATGKLRPVEGRKQLNDLLTKLIAKF
ESYEGTNYDFARIDEGYKNGLMGGIIGFELEIELLEGKFKLGQDRSQADRESLLKKLSEAKAPRSLREFTSNFYDRQKSL
G

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 27284; Mature: 27284

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRDLLAGLALASVEARSQTRTKENPAESLYIPKPQLVDDRRFLHAFMDEFSFVDLVTV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCEEEEEEE
SPSLRITHIPVWLDRSAGAYGTIHGHISRQNPQHEAFDGRQTGVIVFRGPHGYISPTWYA
CCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEC
KSENAVPTWNFAVVHATGKLRPVEGRKQLNDLLTKLIAKFESYEGTNYDFARIDEGYKNG
CCCCCCCCCEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHCC
LMGGIIGFELEIELLEGKFKLGQDRSQADRESLLKKLSEAKAPRSLREFTSNFYDRQKSL
CCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure
MNRRDLLAGLALASVEARSQTRTKENPAESLYIPKPQLVDDRRFLHAFMDEFSFVDLVTV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCEEEEEEE
SPSLRITHIPVWLDRSAGAYGTIHGHISRQNPQHEAFDGRQTGVIVFRGPHGYISPTWYA
CCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEC
KSENAVPTWNFAVVHATGKLRPVEGRKQLNDLLTKLIAKFESYEGTNYDFARIDEGYKNG
CCCCCCCCCEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHCC
LMGGIIGFELEIELLEGKFKLGQDRSQADRESLLKKLSEAKAPRSLREFTSNFYDRQKSL
CCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]