| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624013
Identifier: 116624013
GI number: 116624013
Start: 6218168
End: 6220537
Strand: Direct
Name: 116624013
Synonym: Acid_4925
Alternate gene names: NA
Gene position: 6218168-6220537 (Clockwise)
Preceding gene: 116624012
Following gene: 116624015
Centisome position: 62.4
GC content: 62.32
Gene sequence:
>2370_bases GTGTCCGAAGTTACAGTTCCGTTAACGCCAGAAGAGTTGCGAAAAATGGACGCGTGGTGGCGCGCGGCCAACTATCTTTC GGTAGGACAGATCTACCTCCACGATAATCCGCTGCTCAAACTCCCACTCACCCTGGAACATATCAAACCCCGGCTGCTTG GGCATTGGGGCACTACGCCGGGGTTGAACTTCATTTACGTACATTGCAACCGGCTGATCCGCAAATACGATCTGGACATG ATCTACGTGACCGGACCGGGGCATGGCGGACCGGGGCTCGTGGCCAATACATATCTCGAGGGCACCTATAGCGAGTTCTG GCCGCACATCCCCGAGAGCGCCGAGGGCATGAAGCGGCTGTTCAAGCAGTTCTCGTTTCCGGGCGGGATTCCGAGTCACG TGGCGCCGGAGACGCCGGGCTCGATCCACGAAGGCGGGGAGTTGGGGTATTCGCTGCTGCACGCGTACGGCGCGGCTTTC GACAATCCCGATCTTGTGGTGTGCTGCGTGATCGGCGATGGCGAAGCGGAGACCGGCGCGCTAGCGACGAGCTGGCACTC CAACAAATTCCTCAACGCCGAGCGCGATGGCGCCGTGATCCCGGTGCTCCACCTCAACGGCTACAAGATCGCCGGGCCCA CCGTGCTGGCGCGGATGCCGGAGCAGGAGCTGACCGATCTGCTAAAGGGTTATGGCTACCGGCCCTACTTCGTGGAGGGC GACGATCCGCCGGCGATGCATCAGAAGATGGCGGCGACGATGGATGCCGTGATCGCGGAGATCCGGCGCATCCAGCACGA AGCGCGCTCCGGGGGCGCGGTCTCGCAGGCCGCCTGGCCGGTGGTGGTGCTGCGCACGCCGAAGGGCTGGACCGGTCCGA AGGTGGTGGACGGAATCCAGGTCGAGGGCACGTTCCGCGCGCACCAGGTTCCGCTCTCGGAACTCAGCGCCAAGCCGGAG CACATTCGAATTCTCGAGAATTGGATGAAGAGTTACCGGCCCGAGGAGTTGTTCGACGAGCACGGCAAGCTGGTCGGGGA GATTGCGGAGCTCGCACCCAAAGGCGATCGCCGCATGGGCGCGAACCCGCACGCCAACGGCGGCCTGCTGCTGAAGGACC TCGATATGCCCGAGTTCGGCGACTACGCGGTAGCGGTACCCAGTCCCGGCACGGTCAAGGCCGAGGCCACGCGCGTGATG GGCCGGCTGCTGCGCGATGTGATGAAGCGCAATCTGGAATCGCGCAACTTCCGCGTGGTGGGGCCGGACGAGACCAACTC CAACCGGCTGGGCGCGCTGTTCGAAGTGACCGATCGAGTCTCCATGGAGGCGATTCTGCCCAATGACGATCACGTCACTC ACAGCGGCCGTGTGATGGAGGTGCTCAGCGAGCACATGTGCGAAGGCTGGCTGGAGGGCTATCTGTTGACCGGCCGCCAC GGCTTTTTCTCCTGCTACGAAGCCTTCATCCACATCATCGATTCCATGTTCAATCAGCACGCGAAGTGGCTGAAGGTGAC GCAGCACATTCCCTGGCGGCGGCCGATCGCGTCGCTGAATTATCTGCTGACGTCCCACGTCTGGCAGCAGGACCACAACG GGTTCAGCCACCAGGATCCGGGCTTTCTGGACCACGTGGTCAACAAGAAGGCGGACGTGGTCCGCGTCTACCTTCCGCCC GATGCGAACACCTTACTTTCCGTCACCGACCACTGCCTGCGGAGCAGGAATTATGTGAACGTGATTGTCGCGGGCAAAGC GCCCGCGCTGCAGTGGCTGGATATGGACGCGGCGATCACGCACTGCACCAACGGCATCGGAATCTGGAGTTGGGCGAGCA ACGACCAGGGACAGGAGCCGGATGTGGTGATGGCCTGCTGCGGCGATGTCCCGACGGTCGAAACGCTGGCGGCGGTGGAC CTGTTGCGGCGCAATCTGCCCGATCTGAAAATCCGCGTGGTGAACGTGGTGGACCTGATGACGCTACAGCCCGCGAGCGA GCACCCGCACGGCCTTTCGGACCGCGATTTCGATTCCATCTTCACCACCGGCAAACCGGTGGTCTTCGCGTTCCACGGCT ATCCCTGGCTGATCCACCGGCTCACGTACCGCCGTACCAATCACGTCAACCTTCACGTGCGCGGATATAAGGAAGAGGGC ACCACCACCACGCCATTCGATATGACGGTGTTGAACGACCTGGACCGCTTCCACCTTGCCATGGATGTGCTGGACCGCGT GCCGCGCGTACGCGATATCAGCGCACATTTGAAGCAGGCGCTGCGCAACAAGCTGATCGAACACAAGCACTACGTCACGA CGTTCGGTGAAGACATGCCCGAAATCCGCGAGTGGACGTGGAAGGGGTGA
Upstream 100 bases:
>100_bases TCCCGAAGAGTTCGCCAACATTTCGTAACGTAGATCGCTCCCTCACGTTCGCGGTTCGCGGCATCGGCGACAATGGTTTC TGAAGTCAAAGGAGACCAGT
Downstream 100 bases:
>100_bases CGCGTGAAGGCAGCCTAGGCTGCCTTCATTTCCGGCTTCAACAGGACCTTGGTCCAGTCTTTGCCACTGCCGACTCCACG ATGATCGAAATGCGCGTAGG
Product: putative phosphoketolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 789; Mature: 788
Protein sequence:
>789_residues MSEVTVPLTPEELRKMDAWWRAANYLSVGQIYLHDNPLLKLPLTLEHIKPRLLGHWGTTPGLNFIYVHCNRLIRKYDLDM IYVTGPGHGGPGLVANTYLEGTYSEFWPHIPESAEGMKRLFKQFSFPGGIPSHVAPETPGSIHEGGELGYSLLHAYGAAF DNPDLVVCCVIGDGEAETGALATSWHSNKFLNAERDGAVIPVLHLNGYKIAGPTVLARMPEQELTDLLKGYGYRPYFVEG DDPPAMHQKMAATMDAVIAEIRRIQHEARSGGAVSQAAWPVVVLRTPKGWTGPKVVDGIQVEGTFRAHQVPLSELSAKPE HIRILENWMKSYRPEELFDEHGKLVGEIAELAPKGDRRMGANPHANGGLLLKDLDMPEFGDYAVAVPSPGTVKAEATRVM GRLLRDVMKRNLESRNFRVVGPDETNSNRLGALFEVTDRVSMEAILPNDDHVTHSGRVMEVLSEHMCEGWLEGYLLTGRH GFFSCYEAFIHIIDSMFNQHAKWLKVTQHIPWRRPIASLNYLLTSHVWQQDHNGFSHQDPGFLDHVVNKKADVVRVYLPP DANTLLSVTDHCLRSRNYVNVIVAGKAPALQWLDMDAAITHCTNGIGIWSWASNDQGQEPDVVMACCGDVPTVETLAAVD LLRRNLPDLKIRVVNVVDLMTLQPASEHPHGLSDRDFDSIFTTGKPVVFAFHGYPWLIHRLTYRRTNHVNLHVRGYKEEG TTTTPFDMTVLNDLDRFHLAMDVLDRVPRVRDISAHLKQALRNKLIEHKHYVTTFGEDMPEIREWTWKG
Sequences:
>Translated_789_residues MSEVTVPLTPEELRKMDAWWRAANYLSVGQIYLHDNPLLKLPLTLEHIKPRLLGHWGTTPGLNFIYVHCNRLIRKYDLDM IYVTGPGHGGPGLVANTYLEGTYSEFWPHIPESAEGMKRLFKQFSFPGGIPSHVAPETPGSIHEGGELGYSLLHAYGAAF DNPDLVVCCVIGDGEAETGALATSWHSNKFLNAERDGAVIPVLHLNGYKIAGPTVLARMPEQELTDLLKGYGYRPYFVEG DDPPAMHQKMAATMDAVIAEIRRIQHEARSGGAVSQAAWPVVVLRTPKGWTGPKVVDGIQVEGTFRAHQVPLSELSAKPE HIRILENWMKSYRPEELFDEHGKLVGEIAELAPKGDRRMGANPHANGGLLLKDLDMPEFGDYAVAVPSPGTVKAEATRVM GRLLRDVMKRNLESRNFRVVGPDETNSNRLGALFEVTDRVSMEAILPNDDHVTHSGRVMEVLSEHMCEGWLEGYLLTGRH GFFSCYEAFIHIIDSMFNQHAKWLKVTQHIPWRRPIASLNYLLTSHVWQQDHNGFSHQDPGFLDHVVNKKADVVRVYLPP DANTLLSVTDHCLRSRNYVNVIVAGKAPALQWLDMDAAITHCTNGIGIWSWASNDQGQEPDVVMACCGDVPTVETLAAVD LLRRNLPDLKIRVVNVVDLMTLQPASEHPHGLSDRDFDSIFTTGKPVVFAFHGYPWLIHRLTYRRTNHVNLHVRGYKEEG TTTTPFDMTVLNDLDRFHLAMDVLDRVPRVRDISAHLKQALRNKLIEHKHYVTTFGEDMPEIREWTWKG >Mature_788_residues SEVTVPLTPEELRKMDAWWRAANYLSVGQIYLHDNPLLKLPLTLEHIKPRLLGHWGTTPGLNFIYVHCNRLIRKYDLDMI YVTGPGHGGPGLVANTYLEGTYSEFWPHIPESAEGMKRLFKQFSFPGGIPSHVAPETPGSIHEGGELGYSLLHAYGAAFD NPDLVVCCVIGDGEAETGALATSWHSNKFLNAERDGAVIPVLHLNGYKIAGPTVLARMPEQELTDLLKGYGYRPYFVEGD DPPAMHQKMAATMDAVIAEIRRIQHEARSGGAVSQAAWPVVVLRTPKGWTGPKVVDGIQVEGTFRAHQVPLSELSAKPEH IRILENWMKSYRPEELFDEHGKLVGEIAELAPKGDRRMGANPHANGGLLLKDLDMPEFGDYAVAVPSPGTVKAEATRVMG RLLRDVMKRNLESRNFRVVGPDETNSNRLGALFEVTDRVSMEAILPNDDHVTHSGRVMEVLSEHMCEGWLEGYLLTGRHG FFSCYEAFIHIIDSMFNQHAKWLKVTQHIPWRRPIASLNYLLTSHVWQQDHNGFSHQDPGFLDHVVNKKADVVRVYLPPD ANTLLSVTDHCLRSRNYVNVIVAGKAPALQWLDMDAAITHCTNGIGIWSWASNDQGQEPDVVMACCGDVPTVETLAAVDL LRRNLPDLKIRVVNVVDLMTLQPASEHPHGLSDRDFDSIFTTGKPVVFAFHGYPWLIHRLTYRRTNHVNLHVRGYKEEGT TTTPFDMTVLNDLDRFHLAMDVLDRVPRVRDISAHLKQALRNKLIEHKHYVTTFGEDMPEIREWTWKG
Specific function: Unknown
COG id: COG3957
COG function: function code G; Phosphoketolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the XFP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR005593 - InterPro: IPR018969 - InterPro: IPR019790 - InterPro: IPR018970 - InterPro: IPR019789 [H]
Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]
EC number: NA
Molecular weight: Translated: 88609; Mature: 88478
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS60002 PHOSPHOKETOLASE_1 ; PS60003 PHOSPHOKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVTVPLTPEELRKMDAWWRAANYLSVGQIYLHDNPLLKLPLTLEHIKPRLLGHWGTTP CCCEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCHHHHCHHHHCCCCCCC GLNFIYVHCNRLIRKYDLDMIYVTGPGHGGPGLVANTYLEGTYSEFWPHIPESAEGMKRL CCEEEEEEHHHHHHHHCCCEEEEECCCCCCCCCEEEHEECCCHHHHCCCCCCHHHHHHHH FKQFSFPGGIPSHVAPETPGSIHEGGELGYSLLHAYGAAFDNPDLVVCCVIGDGEAETGA HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC LATSWHSNKFLNAERDGAVIPVLHLNGYKIAGPTVLARMPEQELTDLLKGYGYRPYFVEG EEECCCCCCCCCCCCCCCEEEEEEECCEEECCCHHHHCCCHHHHHHHHHCCCCCCEEECC DDPPAMHQKMAATMDAVIAEIRRIQHEARSGGAVSQAAWPVVVLRTPKGWTGPKVVDGIQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEE VEGTFRAHQVPLSELSAKPEHIRILENWMKSYRPEELFDEHGKLVGEIAELAPKGDRRMG EECCCHHHCCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC ANPHANGGLLLKDLDMPEFGDYAVAVPSPGTVKAEATRVMGRLLRDVMKRNLESRNFRVV CCCCCCCCEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE GPDETNSNRLGALFEVTDRVSMEAILPNDDHVTHSGRVMEVLSEHMCEGWLEGYLLTGRH CCCCCCCCCCCHHEEHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCC GFFSCYEAFIHIIDSMFNQHAKWLKVTQHIPWRRPIASLNYLLTSHVWQQDHNGFSHQDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC GFLDHVVNKKADVVRVYLPPDANTLLSVTDHCLRSRNYVNVIVAGKAPALQWLDMDAAIT CHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCHHHHH HCTNGIGIWSWASNDQGQEPDVVMACCGDVPTVETLAAVDLLRRNLPDLKIRVVNVVDLM HHCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEHHH TLQPASEHPHGLSDRDFDSIFTTGKPVVFAFHGYPWLIHRLTYRRTNHVNLHVRGYKEEG EECCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEECCCC TTTTPFDMTVLNDLDRFHLAMDVLDRVPRVRDISAHLKQALRNKLIEHKHYVTTFGEDMP CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EIREWTWKG HHHHHCCCC >Mature Secondary Structure SEVTVPLTPEELRKMDAWWRAANYLSVGQIYLHDNPLLKLPLTLEHIKPRLLGHWGTTP CCEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCHHHHCHHHHCCCCCCC GLNFIYVHCNRLIRKYDLDMIYVTGPGHGGPGLVANTYLEGTYSEFWPHIPESAEGMKRL CCEEEEEEHHHHHHHHCCCEEEEECCCCCCCCCEEEHEECCCHHHHCCCCCCHHHHHHHH FKQFSFPGGIPSHVAPETPGSIHEGGELGYSLLHAYGAAFDNPDLVVCCVIGDGEAETGA HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC LATSWHSNKFLNAERDGAVIPVLHLNGYKIAGPTVLARMPEQELTDLLKGYGYRPYFVEG EEECCCCCCCCCCCCCCCEEEEEEECCEEECCCHHHHCCCHHHHHHHHHCCCCCCEEECC DDPPAMHQKMAATMDAVIAEIRRIQHEARSGGAVSQAAWPVVVLRTPKGWTGPKVVDGIQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEE VEGTFRAHQVPLSELSAKPEHIRILENWMKSYRPEELFDEHGKLVGEIAELAPKGDRRMG EECCCHHHCCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC ANPHANGGLLLKDLDMPEFGDYAVAVPSPGTVKAEATRVMGRLLRDVMKRNLESRNFRVV CCCCCCCCEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE GPDETNSNRLGALFEVTDRVSMEAILPNDDHVTHSGRVMEVLSEHMCEGWLEGYLLTGRH CCCCCCCCCCCHHEEHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCC GFFSCYEAFIHIIDSMFNQHAKWLKVTQHIPWRRPIASLNYLLTSHVWQQDHNGFSHQDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC GFLDHVVNKKADVVRVYLPPDANTLLSVTDHCLRSRNYVNVIVAGKAPALQWLDMDAAIT CHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCHHHHH HCTNGIGIWSWASNDQGQEPDVVMACCGDVPTVETLAAVDLLRRNLPDLKIRVVNVVDLM HHCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEHHH TLQPASEHPHGLSDRDFDSIFTTGKPVVFAFHGYPWLIHRLTYRRTNHVNLHVRGYKEEG EECCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEECCCC TTTTPFDMTVLNDLDRFHLAMDVLDRVPRVRDISAHLKQALRNKLIEHKHYVTTFGEDMP CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EIREWTWKG HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14621292 [H]