Click here to switch to the map view.

The map label for this gene is 116623997

Identifier: 116623997

GI number: 116623997

Start: 6195130

End: 6195930

Strand: Direct

Name: 116623997

Synonym: Acid_4909

Alternate gene names: NA

Gene position: 6195130-6195930 (Clockwise)

Preceding gene: 116623996

Following gene: 116623998

Centisome position: 62.16

GC content: 66.92

Gene sequence:

>801_bases
GTGATGTTTTGGGCGGAACGCGACGATCTTGCGGTCATTGCCGCGCTCGGCGTGCGCTATGGACAACTCGGAGTCCCCGG
TGGAATGAAGCTCGATTCCGCCGGGGCGGCGCACTGGAAACAGGCGCTCTCCTCCGCCGGAATCACGCCCGTCACCGTGG
TCGCCGCCTATGAAGGCGAGGACTACGCCGACATTCCGACCGTGCAGCACACGGTCGGCTTCATCCCCCCGGCCACTCGC
GCCGCGCGCGAAGCCCGAACGCTCGCGGTCAGCGATTTCGCAGCGGCGCTCGGCGTGCGCAGCATCGCCTGCCACATCGG
CTTCGTGCCCGAGGATGCGCATGACCCTGGCTACACCGGCGTCCGCGACACCGTACGCCACGTCTGCGACCATGCCGCGC
GGCACGGCCAGACCTTTGCGCTGGAGACCGGACAGGAGCGCGCCGGGGTGCTGCTTGACTTCATCCACGACGTAGATCGC
CCGAACCTGCGCATCAACTTCGATCCCGCAAACTTGATTCTGTACGGCACCGACGAGCCGCTCGCAGCCCTTAAGACACT
CGCCCCGCTGGTGGTTTCGGTGCATTGCAAAGATGGGGACCCACCCCCCGCCGGCATTCCCGGAGCGCTCGGCTCGGAGC
GCCCGCTGGGCCACGGTTCGGTCGGCATCCCGCGATTCATTCAGACTTTGCGCGAGGTCGGCTTCCCCGGCCCGCTCAAC
GTTGAGCGTGAAGCCGAGGATCAATCTCAGCGCCTCCGCGACATCGCCGCCGGCATCGCACTGCTACGCACGCTCGTCTA
A

Upstream 100 bases:

>100_bases
GCTGTCCACCGGAAGAGTCGGCATATGTCGTGGAATTGATGCGCGAACTGCTGGCCGCGCGCGAACGAAACGGAGAGAAA
ATTTCATGTTCGAACCAGGA

Downstream 100 bases:

>100_bases
AGCCGGTGCCTTTTCAACTGGCAACCAGTTCCGCCACAGTGAGAACATCCTCTTCGAAATGATGCGTGACCTGGCCGCAG
AACCAGCGGTGGATTCTCAG

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Xylose Isomerase Domain-Containing Protein TIM Barrel; Hexulose-6-Phosphate Isomerase; Sugar Phosphate Isomerase/Epimerase

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MMFWAERDDLAVIAALGVRYGQLGVPGGMKLDSAGAAHWKQALSSAGITPVTVVAAYEGEDYADIPTVQHTVGFIPPATR
AAREARTLAVSDFAAALGVRSIACHIGFVPEDAHDPGYTGVRDTVRHVCDHAARHGQTFALETGQERAGVLLDFIHDVDR
PNLRINFDPANLILYGTDEPLAALKTLAPLVVSVHCKDGDPPPAGIPGALGSERPLGHGSVGIPRFIQTLREVGFPGPLN
VEREAEDQSQRLRDIAAGIALLRTLV

Sequences:

>Translated_266_residues
MMFWAERDDLAVIAALGVRYGQLGVPGGMKLDSAGAAHWKQALSSAGITPVTVVAAYEGEDYADIPTVQHTVGFIPPATR
AAREARTLAVSDFAAALGVRSIACHIGFVPEDAHDPGYTGVRDTVRHVCDHAARHGQTFALETGQERAGVLLDFIHDVDR
PNLRINFDPANLILYGTDEPLAALKTLAPLVVSVHCKDGDPPPAGIPGALGSERPLGHGSVGIPRFIQTLREVGFPGPLN
VEREAEDQSQRLRDIAAGIALLRTLV
>Mature_266_residues
MMFWAERDDLAVIAALGVRYGQLGVPGGMKLDSAGAAHWKQALSSAGITPVTVVAAYEGEDYADIPTVQHTVGFIPPATR
AAREARTLAVSDFAAALGVRSIACHIGFVPEDAHDPGYTGVRDTVRHVCDHAARHGQTFALETGQERAGVLLDFIHDVDR
PNLRINFDPANLILYGTDEPLAALKTLAPLVVSVHCKDGDPPPAGIPGALGSERPLGHGSVGIPRFIQTLREVGFPGPLN
VEREAEDQSQRLRDIAAGIALLRTLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28269; Mature: 28269

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFWAERDDLAVIAALGVRYGQLGVPGGMKLDSAGAAHWKQALSSAGITPVTVVAAYEGE
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCCCCEEEEEEEECCC
DYADIPTVQHTVGFIPPATRAAREARTLAVSDFAAALGVRSIACHIGFVPEDAHDPGYTG
CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VRDTVRHVCDHAARHGQTFALETGQERAGVLLDFIHDVDRPNLRINFDPANLILYGTDEP
HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCH
LAALKTLAPLVVSVHCKDGDPPPAGIPGALGSERPLGHGSVGIPRFIQTLREVGFPGPLN
HHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
VEREAEDQSQRLRDIAAGIALLRTLV
CCCCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MMFWAERDDLAVIAALGVRYGQLGVPGGMKLDSAGAAHWKQALSSAGITPVTVVAAYEGE
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCCCCEEEEEEEECCC
DYADIPTVQHTVGFIPPATRAAREARTLAVSDFAAALGVRSIACHIGFVPEDAHDPGYTG
CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VRDTVRHVCDHAARHGQTFALETGQERAGVLLDFIHDVDRPNLRINFDPANLILYGTDEP
HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCH
LAALKTLAPLVVSVHCKDGDPPPAGIPGALGSERPLGHGSVGIPRFIQTLREVGFPGPLN
HHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
VEREAEDQSQRLRDIAAGIALLRTLV
CCCCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA