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The map label for this gene is ycjS [C]

Identifier: 116623996

GI number: 116623996

Start: 6194120

End: 6195133

Strand: Direct

Name: ycjS [C]

Synonym: Acid_4908

Alternate gene names: 116623996

Gene position: 6194120-6195133 (Clockwise)

Preceding gene: 116623994

Following gene: 116623997

Centisome position: 62.15

GC content: 65.19

Gene sequence:

>1014_bases
ATGCCAATGAAGATCGCCGTGCTCGGCCTTGGATTCATGGGAAGCGTCCACCTGCGCGCGCTGCGCGATATCGAAGGCGC
CGAGCTGGCTGCCGTATTCTCCAATGACGAGCGTCAGCTCTCTGGCGACCTTTCCGCGACGCAGGGTAACATCGGCGGAC
CCGCCGGCCATTTCGATTTCTCCGCCATCAAGCGCTACCGCGAGCTCGCCGACGTCTTCGCCGATCCCGACATCGAGGCC
GTCGATCTCTGCCTCCCCACGCATTTCCACGAGTCCGCAACCGTTCAGGCCCTGCGCGCCGGCAAGCACGTGCTCGTCGA
AAAACCTATGGCGCTCGATGGACCCGCCGCCCGGCGCATGGTCGCCGAGGCCGGGCGCAGCGGCCGCATCCTGATGGCCG
CGCAGGTCATCCGCTTCTTCCCCGAATACGTCGCCTTGCGCGATTCCCTGCCCCGTCTCGGCCGCGTGCGCAGCGCGTTC
TTCCGCCGCCGCTGCGCCGCACCCGCCTGGGGCGGCTGGCTGAAAGATCCTGCCAAGAGCGGCGGCGGCGTCTTCGACCT
CTTGATCCACGATCTCGATTTTTGTCTGCACCTCTTCGGAGCGCCGCAAGCCATCGATGCCACCGGAAACTGCGACCCCG
CCAGCGGAATCGATCTCATCGACGCACGCCTCTACTATCCGTTCGGCGCCGTCACGGTCGCCGGCGGCTGGCAGAAATCC
GGCGCCTACCCGTTCGGCATGGAGTATAGCGTCACCGGCGAGCACGGCGCGATGGAGTTCCACTCCGCCGGCCGCCCACC
CACGCTCTACGCAGAAGATGCGGAGCCCCTCCACCTGGAAGTTTGCGACGGCTATGCCGCGGAGATCGCGTACTTCATCG
AGTGCTGTCGCGCCAACCGGAAGCCCGATCGCTGTCCACCGGAAGAGTCGGCATATGTCGTGGAATTGATGCGCGAACTG
CTGGCCGCGCGCGAACGAAACGGAGAGAAAATTTCATGTTCGAACCAGGAGTGA

Upstream 100 bases:

>100_bases
AACGCGAGCCACAGGTAAATCCGGAGGAGACGGTCCGTGGTAGCTCCGGGCGGCATAGCCAAGCATAGCGTGCCCGTGTG
CGCGGTTCCCCTGTTAACCT

Downstream 100 bases:

>100_bases
TGTTTTGGGCGGAACGCGACGATCTTGCGGTCATTGCCGCGCTCGGCGTGCGCTATGGACAACTCGGAGTCCCCGGTGGA
ATGAAGCTCGATTCCGCCGG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MPMKIAVLGLGFMGSVHLRALRDIEGAELAAVFSNDERQLSGDLSATQGNIGGPAGHFDFSAIKRYRELADVFADPDIEA
VDLCLPTHFHESATVQALRAGKHVLVEKPMALDGPAARRMVAEAGRSGRILMAAQVIRFFPEYVALRDSLPRLGRVRSAF
FRRRCAAPAWGGWLKDPAKSGGGVFDLLIHDLDFCLHLFGAPQAIDATGNCDPASGIDLIDARLYYPFGAVTVAGGWQKS
GAYPFGMEYSVTGEHGAMEFHSAGRPPTLYAEDAEPLHLEVCDGYAAEIAYFIECCRANRKPDRCPPEESAYVVELMREL
LAARERNGEKISCSNQE

Sequences:

>Translated_337_residues
MPMKIAVLGLGFMGSVHLRALRDIEGAELAAVFSNDERQLSGDLSATQGNIGGPAGHFDFSAIKRYRELADVFADPDIEA
VDLCLPTHFHESATVQALRAGKHVLVEKPMALDGPAARRMVAEAGRSGRILMAAQVIRFFPEYVALRDSLPRLGRVRSAF
FRRRCAAPAWGGWLKDPAKSGGGVFDLLIHDLDFCLHLFGAPQAIDATGNCDPASGIDLIDARLYYPFGAVTVAGGWQKS
GAYPFGMEYSVTGEHGAMEFHSAGRPPTLYAEDAEPLHLEVCDGYAAEIAYFIECCRANRKPDRCPPEESAYVVELMREL
LAARERNGEKISCSNQE
>Mature_336_residues
PMKIAVLGLGFMGSVHLRALRDIEGAELAAVFSNDERQLSGDLSATQGNIGGPAGHFDFSAIKRYRELADVFADPDIEAV
DLCLPTHFHESATVQALRAGKHVLVEKPMALDGPAARRMVAEAGRSGRILMAAQVIRFFPEYVALRDSLPRLGRVRSAFF
RRRCAAPAWGGWLKDPAKSGGGVFDLLIHDLDFCLHLFGAPQAIDATGNCDPASGIDLIDARLYYPFGAVTVAGGWQKSG
AYPFGMEYSVTGEHGAMEFHSAGRPPTLYAEDAEPLHLEVCDGYAAEIAYFIECCRANRKPDRCPPEESAYVVELMRELL
AARERNGEKISCSNQE

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=277, Percent_Identity=28.8808664259928, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1787574, Length=193, Percent_Identity=29.0155440414508, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI145693182, Length=225, Percent_Identity=26.2222222222222, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87081947, Length=241, Percent_Identity=26.5560165975104, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36704; Mature: 36573

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMKIAVLGLGFMGSVHLRALRDIEGAELAAVFSNDERQLSGDLSATQGNIGGPAGHFDF
CCEEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCH
SAIKRYRELADVFADPDIEAVDLCLPTHFHESATVQALRAGKHVLVEKPMALDGPAARRM
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHH
VAEAGRSGRILMAAQVIRFFPEYVALRDSLPRLGRVRSAFFRRRCAAPAWGGWLKDPAKS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHC
GGGVFDLLIHDLDFCLHLFGAPQAIDATGNCDPASGIDLIDARLYYPFGAVTVAGGWQKS
CCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEHHEEECCCCEEEEECCCCCC
GAYPFGMEYSVTGEHGAMEFHSAGRPPTLYAEDAEPLHLEVCDGYAAEIAYFIECCRANR
CCCCCCCEEEECCCCCCCHHHCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCC
KPDRCPPEESAYVVELMRELLAARERNGEKISCSNQE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCC
>Mature Secondary Structure 
PMKIAVLGLGFMGSVHLRALRDIEGAELAAVFSNDERQLSGDLSATQGNIGGPAGHFDF
CEEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCH
SAIKRYRELADVFADPDIEAVDLCLPTHFHESATVQALRAGKHVLVEKPMALDGPAARRM
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHH
VAEAGRSGRILMAAQVIRFFPEYVALRDSLPRLGRVRSAFFRRRCAAPAWGGWLKDPAKS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHC
GGGVFDLLIHDLDFCLHLFGAPQAIDATGNCDPASGIDLIDARLYYPFGAVTVAGGWQKS
CCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEHHEEECCCCEEEEECCCCCC
GAYPFGMEYSVTGEHGAMEFHSAGRPPTLYAEDAEPLHLEVCDGYAAEIAYFIECCRANR
CCCCCCCEEEECCCCCCCHHHCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCC
KPDRCPPEESAYVVELMRELLAARERNGEKISCSNQE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]