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The map label for this gene is yagR [C]

Identifier: 116623888

GI number: 116623888

Start: 6068929

End: 6071298

Strand: Direct

Name: yagR [C]

Synonym: Acid_4800

Alternate gene names: 116623888

Gene position: 6068929-6071298 (Clockwise)

Preceding gene: 116623887

Following gene: 116623891

Centisome position: 60.9

GC content: 64.73

Gene sequence:

>2370_bases
ATGAGCGATCCCGGCGGAATTCCGCGGCACATCGAAGAGATCCTGGTGACCAATCGCCGGGGCTTCCTCAAAAGCGCGGG
CATGCTCGCGGTGAGTTTCGGAGCATTCGGCGGAGCCGCTCCCACAGTGGCGGCTGCCCAGGAACCCGGCCCCTATCCCA
ATCCCGATTTCCACCAGATCGACTCGTGGATCGTGATTCATCAGGACAACACGGCCACGTTCTACGTCGGCAAAACCGAC
CCCGGCCAGGGCACCGGCACGGGTTTCCGGCAGTTGATGTGCGACGAGCTCGATATCGCCTTCGACCGGACCACCTGCAT
CATGGGCAGCACCGATATCACCGTAGATCAGGTTGGGTCGGGCGGTTCAACCGCAATGGAGCGCGATTCGTGGCCGATGC
GCCGCGTCGCCGCCGAGGCCCGCCGCGTGCTCCTCGAAATGGCGTCCGCCCGCCTGGAAGTGCCGGTCGATCAACTGGCC
GTCAGTAACGCGGTCATCACCGTGAAAGCCGAACCCGCCGGTTCTCCAACACAGCGCCGCGTCACCTATGGCGAGCTGAT
CGGCGGCAAGAAGTTCAATGTTACGCTGAACGGCAACAACATCAACGCGGTCGCCGGCTCCGCCAAAACCAAGTCGGTGC
CAGAGCTCAAGTACACCGGCCAGTCGCTGCAGCGCGACGACATTCCCGCCAAAGTGGACGGCTCCCTCAAGTGGGCCGTG
GACGTAAAGCTGCCGGGCATGGTTCACGCGCGCAACGTGAAGCCCCCGTTCGCATGTGCCAAACTGACCGCTATCGATGA
ATCCTCCGTAAAGGGCATGCCGGGCTTCATCAAGGTGGTGAGCAAAGGCAACTACGTTGCCGTCGTGTGCGAGCGCGAAG
AGCAGGCCATTCGCGCTGCCCGCCAGCTCAAGACCACCTGGCAAAAGCCCGCGACGCCGCCCTTTCCCGCCTCCGAAGAT
CTCTTCGACTACATGCGCACCGCGCCCCCTGTCTCGCCGGGAAGGCCGGCTGTCACGGGAGATCCGGGCGCCGCATTTTC
GGCCGCCGCCAAAATGGTTGAAGCCGAGTACGAAGTGCCCTTCCAGGGCCACACTGCGTTCGCACCCGCTCATGCCACCG
CCGACCCCTCGAACGGTCAGATGACCGTCTATTCGAATGACATGAAATCGTACGGCATGCGCAGAGGTGTCGCGACCTTT
CTCGGCATGCCGCAGGATCGCGTTCGGGTGGTCTGGATGCAGGGCCCGCAGGGCTTCGGCCGCACTGCGGCGGAGGATGC
CGGCTGCGAGGCGGCCTGGATCGCCCGCGAGATCGGCCGCCCCGTTCGCATGCAATGGATGCGCGACGAGGAAACCGCCT
GGGACACCAAGAGTCCGGCTTTCCTGGTAAAAATGCGCGGCGCTCTGGATGCGGAGGGCCGGCTGATCGCGTACGACTAT
AACGCCCGTTCCTGCGACCACAACCACCTCGGCTACAACGAGCCGGATACCGTCCTGATCGCGCAACTCATGGGCTCGCG
GCGAACAACGCCCGCCGCCGGCAGCTCATCCCTGCCTTCCGACATGTACGCAATCCCCAATCGCACCATGACCGGCGACG
TCGTGGGCCTGCCGGCCCTCTGGGAAACGCCGCTACGCACCGGCAACCTGCGCGACCCGAATGGCCCGCAAGCCACATTT
GCAGCCGAGTCGTTCGTGGACGAAGCCGCCGCGGCTGCCAACACCGACCCCCTCGAATTCCGCTTGAAGATGCTGACTTC
GGGCACCGACGAGGACGCTGGATTCCGGCGAGCGCGGTCGATTGCCGTTCTCAACGCCGCGGCGGAAAAGTACGGCTGGA
ATTCGCGCCCCTCGCCGAAACCGCTCGCCAAGGGAGACATTCTGACCGGGCGCGGCATCGCCTACTCCTTCCGCGGCCAG
ACTGTTGTGGCGCAGATCGCGGAAGTCGAAGTCAATCGCCGGACCGGGCACGTATGGGCGAAGCGCTTGGTTTGCGCGCA
CGATTCCGGCCTCGTGGTCAATCCCGATAGCCTCCGCCACGCCGTCGAATGCGGCACGCTTCACGGTCTAAGCCGCGCCA
TCCATGAGGAGGTTCGGTTCGACACGGAGAAGGTGACCAGCCTCGATTGGCTCTCGCACCCCACTCTCCGCCATGCCGAC
ACTCCGGAACGCATCGATGTCGTGCTGGTGAATGGCGATCCGAATCCGAACCGCCCCGACCTGCCGCCCTACGGAGCCGG
CGAGGCTTCGCTCAAGCCCATGCTCGCAGCCATCGCCAACGCCATCTACGATGCCACCGGAGTCCGCATCCGCAGAGTCC
CCTTCCGCGACGACCGCGTCCTCGCCGCCTTGAAAGCCGCCGGCGTATAG

Upstream 100 bases:

>100_bases
TGTGCCGCTGCATGAGTTACTACCGCGTTCAGACGGCGATCAAACGCGCGGCCAGGACGCTTGCCGGCGCTTCGCCCAAC
TCCGGAAATGAGGTGGTGGC

Downstream 100 bases:

>100_bases
ATTTCTACTGTGCACCCGTTTTGCTCATCGGCGATCTCGCAGCACTGTATTACTGTGCATTTGTGCTACTTCAGGTATGA
ACTCAAAAACTTTTGTCGAT

Product: aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein

Products: NA

Alternate protein names: ALDH [H]

Number of amino acids: Translated: 789; Mature: 788

Protein sequence:

>789_residues
MSDPGGIPRHIEEILVTNRRGFLKSAGMLAVSFGAFGGAAPTVAAAQEPGPYPNPDFHQIDSWIVIHQDNTATFYVGKTD
PGQGTGTGFRQLMCDELDIAFDRTTCIMGSTDITVDQVGSGGSTAMERDSWPMRRVAAEARRVLLEMASARLEVPVDQLA
VSNAVITVKAEPAGSPTQRRVTYGELIGGKKFNVTLNGNNINAVAGSAKTKSVPELKYTGQSLQRDDIPAKVDGSLKWAV
DVKLPGMVHARNVKPPFACAKLTAIDESSVKGMPGFIKVVSKGNYVAVVCEREEQAIRAARQLKTTWQKPATPPFPASED
LFDYMRTAPPVSPGRPAVTGDPGAAFSAAAKMVEAEYEVPFQGHTAFAPAHATADPSNGQMTVYSNDMKSYGMRRGVATF
LGMPQDRVRVVWMQGPQGFGRTAAEDAGCEAAWIAREIGRPVRMQWMRDEETAWDTKSPAFLVKMRGALDAEGRLIAYDY
NARSCDHNHLGYNEPDTVLIAQLMGSRRTTPAAGSSSLPSDMYAIPNRTMTGDVVGLPALWETPLRTGNLRDPNGPQATF
AAESFVDEAAAAANTDPLEFRLKMLTSGTDEDAGFRRARSIAVLNAAAEKYGWNSRPSPKPLAKGDILTGRGIAYSFRGQ
TVVAQIAEVEVNRRTGHVWAKRLVCAHDSGLVVNPDSLRHAVECGTLHGLSRAIHEEVRFDTEKVTSLDWLSHPTLRHAD
TPERIDVVLVNGDPNPNRPDLPPYGAGEASLKPMLAAIANAIYDATGVRIRRVPFRDDRVLAALKAAGV

Sequences:

>Translated_789_residues
MSDPGGIPRHIEEILVTNRRGFLKSAGMLAVSFGAFGGAAPTVAAAQEPGPYPNPDFHQIDSWIVIHQDNTATFYVGKTD
PGQGTGTGFRQLMCDELDIAFDRTTCIMGSTDITVDQVGSGGSTAMERDSWPMRRVAAEARRVLLEMASARLEVPVDQLA
VSNAVITVKAEPAGSPTQRRVTYGELIGGKKFNVTLNGNNINAVAGSAKTKSVPELKYTGQSLQRDDIPAKVDGSLKWAV
DVKLPGMVHARNVKPPFACAKLTAIDESSVKGMPGFIKVVSKGNYVAVVCEREEQAIRAARQLKTTWQKPATPPFPASED
LFDYMRTAPPVSPGRPAVTGDPGAAFSAAAKMVEAEYEVPFQGHTAFAPAHATADPSNGQMTVYSNDMKSYGMRRGVATF
LGMPQDRVRVVWMQGPQGFGRTAAEDAGCEAAWIAREIGRPVRMQWMRDEETAWDTKSPAFLVKMRGALDAEGRLIAYDY
NARSCDHNHLGYNEPDTVLIAQLMGSRRTTPAAGSSSLPSDMYAIPNRTMTGDVVGLPALWETPLRTGNLRDPNGPQATF
AAESFVDEAAAAANTDPLEFRLKMLTSGTDEDAGFRRARSIAVLNAAAEKYGWNSRPSPKPLAKGDILTGRGIAYSFRGQ
TVVAQIAEVEVNRRTGHVWAKRLVCAHDSGLVVNPDSLRHAVECGTLHGLSRAIHEEVRFDTEKVTSLDWLSHPTLRHAD
TPERIDVVLVNGDPNPNRPDLPPYGAGEASLKPMLAAIANAIYDATGVRIRRVPFRDDRVLAALKAAGV
>Mature_788_residues
SDPGGIPRHIEEILVTNRRGFLKSAGMLAVSFGAFGGAAPTVAAAQEPGPYPNPDFHQIDSWIVIHQDNTATFYVGKTDP
GQGTGTGFRQLMCDELDIAFDRTTCIMGSTDITVDQVGSGGSTAMERDSWPMRRVAAEARRVLLEMASARLEVPVDQLAV
SNAVITVKAEPAGSPTQRRVTYGELIGGKKFNVTLNGNNINAVAGSAKTKSVPELKYTGQSLQRDDIPAKVDGSLKWAVD
VKLPGMVHARNVKPPFACAKLTAIDESSVKGMPGFIKVVSKGNYVAVVCEREEQAIRAARQLKTTWQKPATPPFPASEDL
FDYMRTAPPVSPGRPAVTGDPGAAFSAAAKMVEAEYEVPFQGHTAFAPAHATADPSNGQMTVYSNDMKSYGMRRGVATFL
GMPQDRVRVVWMQGPQGFGRTAAEDAGCEAAWIAREIGRPVRMQWMRDEETAWDTKSPAFLVKMRGALDAEGRLIAYDYN
ARSCDHNHLGYNEPDTVLIAQLMGSRRTTPAAGSSSLPSDMYAIPNRTMTGDVVGLPALWETPLRTGNLRDPNGPQATFA
AESFVDEAAAAANTDPLEFRLKMLTSGTDEDAGFRRARSIAVLNAAAEKYGWNSRPSPKPLAKGDILTGRGIAYSFRGQT
VVAQIAEVEVNRRTGHVWAKRLVCAHDSGLVVNPDSLRHAVECGTLHGLSRAIHEEVRFDTEKVTSLDWLSHPTLRHADT
PERIDVVLVNGDPNPNRPDLPPYGAGEASLKPMLAAIANAIYDATGVRIRRVPFRDDRVLAALKAAGV

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786478, Length=475, Percent_Identity=26.1052631578947, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274
- InterPro:   IPR012368
- InterPro:   IPR006311 [H]

Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.2.99.3 [H]

Molecular weight: Translated: 85155; Mature: 85024

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPGGIPRHIEEILVTNRRGFLKSAGMLAVSFGAFGGAAPTVAAAQEPGPYPNPDFHQI
CCCCCCCHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCC
DSWIVIHQDNTATFYVGKTDPGQGTGTGFRQLMCDELDIAFDRTTCIMGSTDITVDQVGS
CCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCEEECCEEEEECCCCCCCEECCC
GGSTAMERDSWPMRRVAAEARRVLLEMASARLEVPVDQLAVSNAVITVKAEPAGSPTQRR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEEEECCCCCCCHHE
VTYGELIGGKKFNVTLNGNNINAVAGSAKTKSVPELKYTGQSLQRDDIPAKVDGSLKWAV
EEHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEE
DVKLPGMVHARNVKPPFACAKLTAIDESSVKGMPGFIKVVSKGNYVAVVCEREEQAIRAA
EEECCCEEEECCCCCCHHHEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHH
RQLKTTWQKPATPPFPASEDLFDYMRTAPPVSPGRPAVTGDPGAAFSAAAKMVEAEYEVP
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
FQGHTAFAPAHATADPSNGQMTVYSNDMKSYGMRRGVATFLGMPQDRVRVVWMQGPQGFG
CCCCCEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
RTAAEDAGCEAAWIAREIGRPVRMQWMRDEETAWDTKSPAFLVKMRGALDAEGRLIAYDY
CCCCHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEC
NARSCDHNHLGYNEPDTVLIAQLMGSRRTTPAAGSSSLPSDMYAIPNRTMTGDVVGLPAL
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEECCCHH
WETPLRTGNLRDPNGPQATFAAESFVDEAAAAANTDPLEFRLKMLTSGTDEDAGFRRARS
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEHHCCCCCCHHHHHHHH
IAVLNAAAEKYGWNSRPSPKPLAKGDILTGRGIAYSFRGQTVVAQIAEVEVNRRTGHVWA
HHEEHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEECCCEEEEEHHHHEECCCCHHHHH
KRLVCAHDSGLVVNPDSLRHAVECGTLHGLSRAIHEEVRFDTEKVTSLDWLSHPTLRHAD
HHEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
TPERIDVVLVNGDPNPNRPDLPPYGAGEASLKPMLAAIANAIYDATGVRIRRVPFRDDRV
CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH
LAALKAAGV
HHHHHHCCC
>Mature Secondary Structure 
SDPGGIPRHIEEILVTNRRGFLKSAGMLAVSFGAFGGAAPTVAAAQEPGPYPNPDFHQI
CCCCCCHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCC
DSWIVIHQDNTATFYVGKTDPGQGTGTGFRQLMCDELDIAFDRTTCIMGSTDITVDQVGS
CCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCEEECCEEEEECCCCCCCEECCC
GGSTAMERDSWPMRRVAAEARRVLLEMASARLEVPVDQLAVSNAVITVKAEPAGSPTQRR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEEEECCCCCCCHHE
VTYGELIGGKKFNVTLNGNNINAVAGSAKTKSVPELKYTGQSLQRDDIPAKVDGSLKWAV
EEHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEE
DVKLPGMVHARNVKPPFACAKLTAIDESSVKGMPGFIKVVSKGNYVAVVCEREEQAIRAA
EEECCCEEEECCCCCCHHHEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHH
RQLKTTWQKPATPPFPASEDLFDYMRTAPPVSPGRPAVTGDPGAAFSAAAKMVEAEYEVP
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
FQGHTAFAPAHATADPSNGQMTVYSNDMKSYGMRRGVATFLGMPQDRVRVVWMQGPQGFG
CCCCCEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
RTAAEDAGCEAAWIAREIGRPVRMQWMRDEETAWDTKSPAFLVKMRGALDAEGRLIAYDY
CCCCHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEC
NARSCDHNHLGYNEPDTVLIAQLMGSRRTTPAAGSSSLPSDMYAIPNRTMTGDVVGLPAL
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEECCCHH
WETPLRTGNLRDPNGPQATFAAESFVDEAAAAANTDPLEFRLKMLTSGTDEDAGFRRARS
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEHHCCCCCCHHHHHHHH
IAVLNAAAEKYGWNSRPSPKPLAKGDILTGRGIAYSFRGQTVVAQIAEVEVNRRTGHVWA
HHEEHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEECCCEEEEEHHHHEECCCCHHHHH
KRLVCAHDSGLVVNPDSLRHAVECGTLHGLSRAIHEEVRFDTEKVTSLDWLSHPTLRHAD
HHEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
TPERIDVVLVNGDPNPNRPDLPPYGAGEASLKPMLAAIANAIYDATGVRIRRVPFRDDRV
CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH
LAALKAAGV
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2606906 [H]